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Almstetter, Martin F.
Tools and applications for one- and two-dimensional
gas chromatography – time-of-flight mass spectrometry-based metabolomics. PhD, Universität Regensburg
Bedal, Konstanze B. and Grässel, Susanne and Oefner, Peter J. and Reinders, Jörg and Reichert, Torsten E. and Bauer, Richard (2014) Collagen XVI induces expression of MMP9 via modulation of AP-1 transcription factors and facilitates invasion of oral squamous cell carcinoma. Plos One 9.
Bauer, Karin and Gosau, Martin and Reinders, Jörg and Oefner, Peter J. and Reichert, Torsten E. and Bauer, Richard (2013) Presenilin1/gamma-secretase modulates P-cadherin processing and influences cell adhesion in oral squamous cell carcinoma cell lines. Carcinogenesis 34, pp. 2622-2628.
Chirasani, Sridhar Reddy and Leukel, Petra and Gottfried, Eva and Hochrein, Jochen and Stadler, Katrin and Neumann, Bernhard and Oefner, Peter J. and Gronwald, Wolfram and Bogdahn, Ulrich and Hau, Peter and Kreutz, Marina and Grauer, Oliver M. (2013) Diclofenac inhibits lactate formation and efficiently counteracts local immune suppression in a murine glioma model. International journal of cancer. Journal international du cancer 132 (4), pp. 843-53.
Dettmer, Katja (2014) Assessment of ionic liquid stationary phases for the GC analysis of fatty acid methyl esters. Analytical and Bioanalytical Chemistry 406, pp. 4931-4939.
del Jel, Miriam M. and Engelmann, Julia and Kunz, Manfred and Schiffner, Susanne and Kuphal, Silke and Anja, Bosserhoff (2014) Transcriptome sequencing of melanocytic nevi and melanomas from Grm1 transgenic mice to determine melanoma driver mutations. Pigment Cell & Melanoma Research 27, pp. 678-680.
Dorn, Christoph and Engelmann, Julia C. and Saugspier, Michael Sebastian and Koch, Andreas and Hartmann, Arndt and Spang, Rainer and Bosserhoff, Anja Katrin and Hellerbrand, Claus (2014) Increased expression of c-Jun in nonalcoholic fatty liver disease. Laboratory Investigation 94, pp. 394-408.
Dettmer, Katja and Vogl, Franziska C. and Ritter, Axel P. and Zhu, Wentao and Nürnberger, Nadine and Kreutz, Marina and Oefner, Peter J. and Gronwald, Wolfram and Gottfried, Eva (2013) Distinct metabolic differences between various human cancer and primary cells. ELECTROPHORESIS 34 (19), pp. 2836-2847.
Demir, Fatih and Horntrich, Claudia and Blachutzik, Jörg O and Scherzer, Sönke and Reinders, Yvonne and Kierszniowska, Sylwia and Schulze, Waltraud X. and Harms, Gregory S. and Hedrich, Rainer and Geiger, Dietmar and Kreuzer, Ines (2013) Arabidopsis nanodomain-delimited ABA signaling pathway regulates the anion channel SLAH3. Proceedings of the National Academy of Sciences of the United States of America 110 (20), pp. 8296-82301.
Fink, Florian (2011) Computational analysis of docked protein-protein complexes. PhD, Universität Regensburg
Hannus, Michael and Beitzinger, Michaela and Engelmann, Julia C. and Weickert, Marie-Theresa and Spang, Rainer and Hannus, Stefan and Meister, Gunter (2014) siPools: highly complex but accurately defined siRNA pools eliminate off-target effects. Nucleic Acids Research 42, pp. 8049-8061.
Holler, Ernst and Butzhammer, Peter and Schmid, Karin and Hundsrucker, Christian and Koestler, Josef and Peter, Katrin and Zhu, Wentao and Sporrer, Daniela and Hehlgans, Thomas and Kreutz, Marina and Holler, Barbara and Wolff, Daniel and Edinger, Matthias and Andreesen, Reinhard and Levine, John E. and Ferrara, James L and Gessner, Andre and Spang, Rainer and Oefner, Peter J. (2014) Metagenomic analysis of the stool microbiome in patients receiving allogeneic SCT: Loss of diversity is associated with use of systemic antibiotics and more pronounced in gastrointestinal GvHD. Biology of Blood and Marrow Transplantation 20 (5), pp. 640-645.
Jitschin, Regina and Braun, Martina and Büttner, Maike and Dettmer, Katja and Bricks, Juliane and Berger, Jana and Eckart, Michael J. and Krause, Stefan W and Oefner, Peter and Le Blanc, Katarina and Mackensen, Andreas and Mougiakakos, Dimitrios (2014) CLL-cells induce IDOhi CD14+HLA-DRlo myeloid derived suppressor cells that inhibit T-cell responses and promote TRegs. Blood.
Klootwijk, Enriko D. and Reichold, Markus and Helip-Wooley, Amanda and Tolaymat, Asad and Broeker, Carsten and Robinette, Steven and Reinders, Jörg and Peindl, Dominika Elisabeth and Renner, Kathrin and Eberhart, Karin and Aßmann, Nadine and Oefner, Peter J. and Dettmer, Katja and Sterner, Christina and Schroeder, Josef and Zorger, Niels and Witzgall, Ralph and Reinhold, Stephan W. and Stanescu, Horia C. and Bockenhauer, Detlef and Jaureguiberry, Gracian and Courtneidge, Holly and Hall, Andrew M. and Wijeyesekera, Anisha and Holmes, Elaine and Nicholson, Jeremy K. and O´Brien, Kevin and Bernardini, Isa and Krasnewich, Donna M. and Arcos-Burgos, Mauricio and Izumi, Yuichiro and Nonoguchi, Hiroshi and Jia, Yuzhi and Reddy, Janardan K. and Ilya, Mohammad and Unwin, Robert J. and Gahl, William A. and Warth, Richard and Kleta, Robert (2014) Mistargeting of Peroxisomal EHHADH and Inherited Renal Fanconi's Syndrome. The New England Journal of Medicine 370, pp. 129-138.
Kuipers, Jack and Moffa, Giusi and Heckerman, David (2014) Addendum on the scoring of Gaussian directed acyclic graphical models. Annals of Statistics. (In Press)
Klein, Matthias S. and Oefner, Peter J. and Gronwald, Wolfram (2013) MetaboQuant: a tool combining individual peak calibration and outlier detection for accurate metabolite quantification in 1D (1)H and (1)H-(13)C HSQC NMR spectra. BioTechniques 54 (5), pp. 251-256.
Kuipers, Jack and Moffa, Giusi (2013) Uniform random generation of large acyclic digraphs. Stats. & Comp..
Moffa, Giusi and Kuipers, Jack (2014) Sequential Monte Carlo EM for multivariate probit models. Comp. Stats. & Data An. 72, pp. 252-272.
Meyer, Katharina (2013) Dissolving heterogeneity in cancer. PhD, Universität Regensburg
Oefner, Peter J. and Hölzl, Georg and Shen, Peidong and Shpirer, Isaac and Gefel, Dov and Lavi, Tal and Wolf, Eilon and Cohen, Jonathan and Cinnioglu, Cengiz and Underhill, Peter A and Rosenberg, Noah A. and Hochrein, Jochen and Granka, Julie M. and Hillel, Jossi and Feldman, Marcus W. (2013) Genetics and the history of the Samaritans: Y-chromosomal microsatellites and genetic affinity between Samaritans and Cohanim. Human Biology 40.
Pauly, Diana and Nagel, Benedik M. and Reinders, Jörg and Kilian, Tobias and Wulf, Matthias and Ackermann, Susanne and Ehrenstein, Boris and Zipfel, Peter F. and Skerka, Christine and Weber, Bernhard H. F. (2014) A Novel Antibody against Human Properdin Inhibits the Alternative Complement System and Specifically Detects Properdin from Blood Samples. PLos ONE 9 (5), e96371.
Salaverria, Itziar and Martin-Guerrero, Idoia and Wagener, Rabea and Kreuz, Markus and Kohler, Christian and Richter, Julia and Pienkowska-Grela, Barbara and Adam, Patrick and Burkhardt, Birgit and Claviez, Alexander and Damm-Welk, Christine and Drexler, H. G. and Hummel, Michael and Jaffe, Elaine S. and Kueppers, Ralf and Lefebvre, Christine and Lisfeld, Jasmin and Loeffler, Markus and Mcleod, Roderick A. and Nagel, Inga and Oschlies, Ilske and Rosolowski, Maciej and Russell, Robert B. and Rymkiewicz, Grzegorz and Schindler, Detlev and Schlesner, Matthias and Scholtysik, Rene and Schwaenen, Carsten and Spang, Rainer and Szczepanowski, Monika and Truemper, Lorenz and Vater, Inga and Wessendorf, Swen and Klapper, Wolfram and Siebert, Rainer (2014) A recurrent 11q aberration pattern characterizes a subset of MYC-negative high-grade B-cell lymphomas resembling Burkitt lymphoma. Blood 123, pp. 1187-1198.
Sadeh, Mohammad Javad and Moffa, Giusi and Spang, Rainer (2013) Considering unknown unknowns: reconstruction of nonconfoundable causal relations in biological networks. Journal of computational biology 20 (11), pp. 920-932.
Sadeh, Mohammad Javad (2013) Considering unknown unknown: reconstruction of non-confoundable causal relations in biological networks. PhD, Universität Regensburg
Stevens, Axel Peter (2011) Analysis of intermediates of the methionine and polyamine metabolism by liquid chromatography-tandem mass spectrometry. PhD, Universität Regensburg
Tea, Muy-Kheng M. and Kroiss, Regina and Muhr, Daniela and Fuerhauser-Rappaport, Christine and Oefner, Peter J. and Wagner, Teresa M and Singer, Christian F. (2013) Central European BRCA2 mutation carriers: Birth cohort status correlates with onset of breast cancer. Maturitas.
Vossenkämper, Anna and Hundsrucker, Christian and Page, Kevin and van Maurik, Andre and Sanders, Theodore J. and Stagg, Andrew J. and Das, Lisa and MacDonald, Thomas T. (2014) A CD3-Specific Antibody Reduces Cytokine Production and Alters Phosphoprotein Profiles in Intestinal Tissues From Patients With Inflammatory Bowel Disease. The American Journal of Gastroenterology 147 (1), pp. 172-183.
Valletta, Daniela and Czech, Barbara and Spruss, Thilo and Ikenberg, Kristian and Wild, Peter J. and Hartmann, Arndt and Weiss, Thomas S. and Oefner, Peter J. and Müller, Martina and Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2014) Regulation and function of the atypical cadherin FAT1 in hepatocellular carcinoma. Carcinogenesis 35, pp. 1407-1415.
Völler, D. and Reinders, Jörg and Meister, Gunter and Bosserhoff, Anja-Katrin (2013) Strong reduction of AGO2 expression in melanoma and cellular consequences. British Journal of Cancer 109, pp. 3116-3124.
Zacharias, Helena and Hochrein, Jochen and Klein, Matthias S. and Samol, Claudia and Oefner, Peter and Gronwald, Wolfram (2013) Current Experimental, Bioinformatic and Statistical Methods used in NMR Based Metabolomics. Current Metabolomics Volume 1 (# 3), pp. 253-268.
Zacharias, Helena and Hochrein, Jochen and Klein, Matthias S. and Samol, Claudia and Oefner, Peter J. and Gronwald, Wolfram (2013) Current Experimental, Bioinformatic and Statistical Methods used in NMR Based Metabolomics. Current Metabolomics 1 (3), pp. 253-268.
Zacharias, Helena and Schley, Gunnar and Hochrein, Jochen and Klein, Matthias S. and Köberle, Carmen and Eckardt, Kai-Uwe and Willam, Carsten and Oefner, Peter J. and Gronwald, Wolfram (2013) Analysis of human urine reveals metabolic changes related to the development of acute kidney injury following cardiac surgery. Metabolomics 9 (3), pp. 697-707.