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Number of items at this level: 203.

A

Assmann, Nadine and Dettmer, Katja and Simbürger, Johann and Broeker, Carsten and Nuernberger, Nadine and Renner, Kathrin and Courtneidge, H. and Klootwijk, E. D. and Duerkop, Axel and Hall, A. and Kleta, R. and Oefner, Peter J. and Reichold, Markus and Reinders, Jörg (2016) Renal Fanconi Syndrome Is Caused by a Mistargeting-Based Mitochondriopathy. Cell Reports (Cell Rep) 15 (7), pp. 1423-1429.

Aßmann, Nadine (2015) Impact of Fanconi-associated protein on the mitochondrial proteome. PhD, Universität Regensburg.

Almstetter, Martin F. (2012) Tools and applications for one- and two-dimensional
gas chromatography – time-of-flight mass spectrometry-based metabolomics.
PhD, Universität Regensburg.

Almstetter, Martin F. and Oefner, Peter J. and Dettmer, Katja (2012) Comprehensive two-dimensional gas chromatography in metabolomics. Analytical and bioanalytical chemistry 402 (6), pp. 1993-2013.

Almstetter, Martin F. and Oefner, Peter J. and Dettmer, Katja (2012) Metabolic fingerprinting using comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Methods in molecular biology 815, pp. 399-411.

Almstetter, Martin F. and Appel, Inka and Dettmer, Katja and Gruber, Michael and Oefner, Peter J. (2011) Comparison of two algorithmic data processing strategies for metabolic fingerprinting by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Journal of chromatography A 1218 (39), pp. 7031-7038.

Appel, Inka and Gronwald, Wolfram and Spang, Rainer (2011) Estimating classification probabilities in high-dimensional diagnostic studies. Bioinformatics 27 (18), pp. 2563-2570.

Amann, Thomas and Bataille, Frauke and Spruss, Thilo and Dettmer, Katja and Wild, Peter J. and Liedtke, Christian and Mühlbauer, Marcus and Kiefer, Paul and Oefner, Peter J. and Trautwein, Christian and Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2010) Reduced expression of fibroblast growth factor receptor 2IIIb in hepatocellular carcinoma induces a more aggressive growth. The American journal of pathology 176 (3), pp. 1433-42.

Almstetter, Martin F. and Appel, Inka and Gruber, Michael and Lottaz, Claudio and Timischl, Birgit and Spang, Rainer and Dettmer, Katja and Oefner, Peter J. (2009) Integrative normalization and comparative analysis for metabolic fingerprinting by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Analytical chemistry 81 (14), pp. 5731-5739.

Amann, Thomas and Maegdefrau, Ulrike and Hartmann, Arndt and Agaimy, Abbas and Marienhagen, Jörg and Weiss, Thomas S. and Stoeltzing, Oliver and Warnecke, Christina and Schölmerich, Jürgen and Oefner, Peter J. and Kreutz, Marina and Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2009) GLUT1 expression is increased in hepatocellular carcinoma and promotes tumorigenesis. The American journal of pathology 174 (4), pp. 1544-1552.

Anchang, Benedict Nchang and Sadeh, Mohammad Javad and Jacob, Juby and Tresch, Achim and Vlad, Marcel O. and Oefner, Peter J. and Spang, Rainer (2009) Modeling the temporal interplay of molecular signaling and gene expression by using dynamic nested effects models. Proceedings of the National Academy of Sciences of the United States of America 106 (16), pp. 6447-6452.

Aronov, P. A. and Hall, L. M. and Dettmer, Katja and Stephensen, C. B. and Hammock, B. D. (2008) Metabolic profiling of major vitamin D metabolites using Diels-Alder derivatization and ultra-performance liquid chromatography-tandem mass spectrometry. Analytical and Bioanalytical Chemistry 391 (5), pp. 1917-1930.

Aronov, P. A. and Dettmer, Katja and Christiansen, J. A. and Cornel, A. J. and Hammock, B. D. (2005) Development of a HPLC/tandem-MS method for the analysis of the larvicides methoprene, hydroprene, and kinoprene at trace levels using Diels-Alder derivatization. Journal of Agricultural and Food Chemistry 53 (9), pp. 3306-3312.

B

Beck, H. and Titze, S. I. and Hubner, S. and Busch, M. and Schlieper, G. and Schultheiss, U. T. and Wanner, C. and Kronenberg, F. and Krane, V. and Eckardt, K. U. and Kottgen, A. and Eckardt, K. U. and Titze, S. and Prokosch, H. U. and Barthlein, B. and Reis, A. and Ekici, A. B. and Gefeller, O. and Hilgers, K. F. and Hubner, S. and Avendano, S. and Becker-Grosspitsch, D. and Hauck, N. and Seuchter, S. A. and Hausknecht, B. and Rittmeier, M. and Weigel, A. and Beck, A. and Ganslandt, T. and Knispel, S. and Dressel, T. and Malzer, M. and Floege, J. and Eitner, F. and Schlieper, G. and Findeisen, K. and Arweiler, E. and Ernst, S. and Unger, M. and Lipski, S. and Schaeffner, E. and Baid-Agrawal, S. and Petzold, K. and Schindler, R. and Kottgen, A. and Schultheiss, U. and Meder, S. and Mitsch, E. and Reinhard, U. and Walz, G. and Haller, H. and Lorenzen, J. and Kielstein, J. T. and Otto, P. and Sommerer, C. and Follinger, C. and Zeier, M. and Wolf, G. and Busch, M. and Paul, K. and Dittrich, L. and Sitter, T. and Hilge, R. and Blank, C. and Wanner, C. and Krane, V. and Schmiedeke, D. and Toncar, S. and Cavitt, D. and Schonowsky, K. and Borner-Klein, A. and Kronenberg, F. and Raschenberger, J. and Kollerits, B. and Forer, L. and Schonherr, S. and Weissensteiner, H. and Oefner, Peter J. and Gronwald, Wolfram and Zacharias, Helena and Schmid, M. (2015) Heart failure in a cohort of patients with chronic kidney disease: the GCKD study. PLoS ONE 10 (4).

Bedal, Konstanze B. and Grässel, Susanne and Oefner, Peter J. and Reinders, Jörg and Reichert, Torsten E. and Bauer, Richard (2014) Collagen XVI induces expression of MMP9 via modulation of AP-1 transcription factors and facilitates invasion of oral squamous cell carcinoma. Plos One 9 (1), e86777.

Burghardt, Tillmann and Kastner, Jürgen and Suleiman, Hani and Rivera-Milla, Eric and Stepanova, Natalya and Lottaz, Claudio and Kubitza, Marion and Böger, Carsten A. and Schmidt, Sarah and Gorski, Mathias and de Vries, Uwe and Schmidt, Helga and Hertting, Irmgard and Kopp, Jeffrey and Rascle, Anne and Moser, Markus and Heid, Iris M. and Warth, Richard and Spang, Rainer and Wegener, Joachim and Mierke, Claudia T. and Englert, Christoph and Witzgall, Ralph (2013) LMX1B is essential for the maintenance of differentiated podocytes in adult kidneys. Journal of the American Society of Nephrology : JASN 24 (11), pp. 1830-1848.

Bauer, Karin and Gosau, Martin and Reinders, Jörg and Oefner, Peter J. and Reichert, Torsten E. and Bauer, Richard (2013) Presenilin1/gamma-secretase modulates P-cadherin processing and influences cell adhesion in oral squamous cell carcinoma cell lines. Carcinogenesis 34, pp. 2622-2628.

Baskaran, Kumaran and Kirchhöfer, Renate and Huber, Fritz and Trenner, Jochen and Brunner, Konrad and Gronwald, Wolfram and Neidig, Klaus-Peter and Kalbitzer, Hans Robert (2009) Chemical shift optimization in multidimensional NMR spectra by AUREMOL-SHIFTOPT. Journal of biomolecular NMR 43 (4), pp. 197-210.

Baumann, Fusun and Leukel, Petra and Doerfelt, Anett and Beier, Christoph P. and Dettmer, Katja and Oefner, Peter J. and Kastenberger, Michael and Kreutz, Marina and Nickl-Jockschat, Thomas and Bogdahn, Ulrich and Bosserhoff, Anja-Katrin and Hau, Peter (2009) Lactate promotes glioma migration by TGF-beta2-dependent regulation of matrix metalloproteinase-2. Neuro-oncology 11 (4), pp. 368-380.

Brunner, Konrad and Gronwald, Wolfram and Fischer, A. and Trenner, J. and Neidig, K.-P. and Kalbitzer, Hans Robert (2008) Automatic Sequential NOESY Assignment and NMR Structure Improvement by X-Ray. In: Hansmann, U. and Meinke, J., (eds.) From Computational Biophysics to Systems Biology (CBSB08). Proceedings of the NIC Workshop 2008. NIC series, 40. John von Neumann Institute for Computing, Jülich, pp. 173-176. ISBN 978-3-9810843-6-8.

Borisov, Sergey M. and Waldhier, Magdalena C. and Klimant, Ingo and Wolfbeis, Otto S. (2007) Optical Carbon Dioxide Sensors Based on Silicone-Encapsulated Room-Temperature Ionic Liquids. Chemistry of materials 19 (25), pp. 6187-6194.

Beier, D. and Hau, Peter and Proescholdt, M. and Lohmeier, A. and Wischhusen, J. and Oefner, Peter J. and Aigner, L. and Brawanski, Alexander and Bogdahn, Ulrich and Beier, Christoph P. (2007) CD133(+) and CD133(-) glioblastoma-derived cancer stem cells show differential growth characteristics and molecular profiles. Cancer Research 67 (9), pp. 4010-4015.

Beyer, D. and Eckerle, P. and Cortes, H. and Engewald, W. and Dettmer, Katja (2005) Development and applications of an automated in-column pyrolysis gas chromatography mass spectrometry system. Chromatographia 62, pp. 417-422.

Bothe, F. and Dettmer, Katja and Engewald, W. (2003) Determination of perfume oil in household products by geadspace solid-phase microextraction and fast capillary gas chromatography. Chromatographia 57 suppl.1, S190-S206.

C

Clara, Renan Orsati and Assmann, Nadine and Ramos Moreno, Ana Carolina and Coimbra, Janine Baptista and Nurenberger, Nadine and Dettmer-Wilde, Katja and Oefner, Peter and Campa, Ana (2015) Melanocytes are more responsive to IFN-γ and produce higher amounts of kynurenine than melanoma cells. Biological Chemistry )Biol Chem. (In Press)

Czech, Barbara and Dettmer, Katja and Valletta, Daniela and Saugspier, Michael Sebastian and Koch, Andreas and Stevens, Axel Peter and Thasler, Wolfgang E. and Müller, Martina and Oefner, Peter J. and Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2013) Expression and function of methylthioadenosine phosphorylase in chronic liver disease. PloS ONE 8 (12), e80703.

Chirasani, Sridhar Reddy and Leukel, Petra and Gottfried, Eva and Hochrein, Jochen and Stadler, Katrin and Neumann, Bernhard and Oefner, Peter J. and Gronwald, Wolfram and Bogdahn, Ulrich and Hau, Peter and Kreutz, Marina and Grauer, Oliver M. (2013) Diclofenac inhibits lactate formation and efficiently counteracts local immune suppression in a murine glioma model. International Journal of Cancer 132 (4), pp. 843-853.

D

Dettmer, Katja (2014) Assessment of ionic liquid stationary phases for the GC analysis of fatty acid methyl esters. Analytical and Bioanalytical Chemistry 406, pp. 4931-4939.

Dettmer, Katja and Vogl, Franziska C. and Ritter, Axel P. and Zhu, Wentao and Nürnberger, Nadine and Kreutz, Marina and Oefner, Peter J. and Gronwald, Wolfram and Gottfried, Eva (2013) Distinct metabolic differences between various human cancer and primary cells. ELECTROPHORESIS 34 (19), pp. 2836-2847.

Demir, Fatih and Horntrich, Claudia and Blachutzik, Jörg O and Scherzer, Sönke and Reinders, Yvonne and Kierszniowska, Sylwia and Schulze, Waltraud X. and Harms, Gregory S. and Hedrich, Rainer and Geiger, Dietmar and Kreuzer, Ines (2013) Arabidopsis nanodomain-delimited ABA signaling pathway regulates the anion channel SLAH3. Proceedings of the National Academy of Sciences of the United States of America 110 (20), pp. 8296-82301.

Dettmer, Katja and Gronwald, Wolfram and Oefner, Peter J. (2013) Instrumentelle Bioanalytik zur Stoffwechselanalytik. Blick in die Wissenschaft.

Dettmer, Katja and Stevens, Axel Peter and Fagerer, Stephan R and Kaspar, Hannelore and Oefner, Peter J. (2012) Amino acid analysis in physiological samples by GC-MS with propyl chloroformate derivatization and iTRAQ-LC-MS/MS. Methods in molecular biology 828, pp. 165-181.

Dettmer, Katja and Stevens, Axel Peter and Fagerer, Stephan R and Kaspar, Hannelore and Oefner, Peter J. (2012) Amino acid analysis in physiological samples by GC-MS with propyl chloroformate derivatization and iTRAQ-LC-MS/MS. Methods in molecular biology 828, pp. 165-181.

Dettmer, Katja and Nürnberger, Nadine and Kaspar, Hannelore and Gruber, Michael and Almstetter, Martin F. and Oefner, Peter J. (2011) Metabolite extraction from adherently growing mammalian cells for metabolomics studies: optimization of harvesting and extraction protocols. Analytical and bioanalytical chemistry 399 (3), pp. 1127-1139.

Dettmer, Katja and Stevens, A. and Gronwald, Wolfram and Hellerbrand, Claus and Oefner, Peter J. (2011) Mass spectrometry based metabolomics to study the development of Non-alcoholic steatohepatitis. Zeitschrift für Gastroenterologie 49.

Dettmer, Katja and Almstetter, Martin F. and Appel, Inka and Nürnberger, Nadine and Schlamberger, Gregor and Gronwald, Wolfram and Meyer, Heinrich H. D. and Oefner, Peter J. (2010) Comparison of serum versus plasma collection in gas chromatography--mass spectrometry-based metabolomics. Electrophoresis 31 (14), pp. 2365-2373.

Dietl, Katrin and Renner, Kathrin and Dettmer, Katja and Timischl, Birgit and Eberhart, Karin and Dorn, Christoph and Hellerbrand, Claus and Kastenberger, Michael and Kunz-Schughart, Leoni A. and Oefner, Peter J. and Andreesen, Reinhard and Gottfried, Eva and Kreutz, Marina (2010) Lactic acid and acidification inhibit TNF secretion and glycolysis of human monocytes. Journal of immunology 184 (3), pp. 1200-1209.

Dueckershoff, K. and Müller, Stefan and Müller, Martin J. and Reinders, Jörg (2008) Impact of cyclopentenone-oxylipins on the proteome of Arabidopsis thaliana. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1784, pp. 1975-1985.

Dettmer, Katja and Hanna, D. and Whetstone, P. and Hansen, R. and Hammock, B. D. (2007) Autism and urinary exogenous neuropeptides: development of an on-line SPE-HPLC-tandem mass spectrometry method to test the opioid excess theory. Analytical and Bioanalytical Chemistry 388 (8), pp. 1643-1651.

Dettmer, Katja and Aronov, P. A. and Hammock, B. D. (2007) Mass spectrometry-based metabolomics. Mass Spectrometry Reviews (Mass Spectrom Rev) 26 (1), pp. 51-78.

Dettmer, Katja and Hammock, B. D. (2004) Metabolomics--a new exciting field within the “omics” Sciences. Environmental Health Perspectives 112 (7), A396-397.

Dettmer, Katja and Engewald, W. (2003) Ambient air analysis of volatile organic compounds using adsorptive enrichment. Chromatographia 57 suppl.1, S339-S347.

Drechsel, D. and Dettmer, Katja and Engewald, W. (2003) Studies of thermally assisted hydrolysis and methylation-GC-MS of fatty acids and triglycerides using different reagents and injection systems. Chromatographia 57 suppl.1, S283-S289.

Dettmer, Katja and Engewald, W. (2002) Adsorbent materials commonly used in air analysis for adsorptive enrichment and thermal desorption of volatile organic compounds. Analytical and Bioanalytical Chemistry 373 (6), pp. 490-500.

Dettmer, Katja and Bittner, T. and Engewald, W. (2001) Adsorptive enrichment and thermal desorption of low-boiling oxygenated compounds—possibilities and limitations. Chromatographia 53 suppl.1, S322-S326.

Drechsel, D. and Dettmer, Katja and Engewald, W. and Bittner, T. and Efner, J. (2001) GC analysis of trichloroacetic acid in water samples by large-volume injection and thermal decarboxylation in a programmed-temperature vaporizer. Chromatographia 54, pp. 151-154.

Dettmer, Katja and Felix, U. and Engewald, W. and Mohnke, M. (2000) Application of a unique selective PLOT capillary column for the analysis of oxygenated compounds in ambient air. Chromatographia 51 Suppl., S221-S227.

Dettmer, Katja and Knobloch, T. and Engewald, W. (2000) Stability of reactive low boiling hydrocarbons on carbon based adsorbents typically used for adsorptive enrichment and thermal desorption. Analytical and Bioanalytical Chemistry (Formerly: Fresenius' Journal of Analytical Chemistry 366, pp. 70-78.

E

Engelmann, Julia C. and Amann, Thomas and Ott-Rötzer, Brigitta and Nützel, Magit and Reinders, Yvonne and Reinders, Jörg and Thasler, Wolfgang E. and Kristl, Theresa and Teufel, Andreas and Huber, Christian G. and Oefner, Peter J. and Spang, Rainer and Hellerbrand, Claus (2015) Causal Modeling of Cancer-Stromal Communication Identifies PAPPA as a Novel Stroma-Secreted Factor Activating NFκB Signaling in Hepatocellular Carcinoma. PLoS Computational Biology 11 (5), pp. 1-22.

Ehret, A. and Hochstuhl, D. and Krattenmacher, N. and Tetens, J. and Klein, M. S. and Gronwald, Wolfram and Thaller, G. (2015) Short communication: Use of genomic and metabolic information as well as milk performance records for prediction of subclinical ketosis risk via artificial neural networks. Journal of dairy science 98 (1), pp. 322-329.

Escalante-Pérez, María and Jaborsky, Mario and Reinders, Jörg and Kurzai, Oliver and Hedrich, Rainer and Ache, Peter (2012) Poplar extrafloral nectar is protected against plant and human pathogenic fungus. Molecular plant 5 (5), pp. 1157-1159.

Eckardt, Kai-Uwe and Bärthlein, Barbara and Baid-Agrawal, Seema and Beck, Andreas and Busch, Martin and Eitner, Frank and Ekici, Arif B and Floege, Jürgen and Gefeller, Olaf and Haller, Hermann and Hilge, Robert and Hilgers, Karl F and Kielstein, Jan T and Krane, Vera and Köttgen, Anna and Kronenberg, Florian and Oefner, Peter J. and Prokosch, Hans-Ulrich and Reis, André and Schmid, Matthias and Schaeffner, Elke and Schultheiss, Ulla T and Seuchter, Susanne A and Sitter, Thomas and Sommerer, Claudia and Walz, Gerd and Wanner, Christoph and Wolf, Gunter and Zeier, Martin and Titze, Stephanie (2012) The German Chronic Kidney Disease (GCKD) study: design and methods. Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association 27 (4), pp. 1454-1460.

Eberhart, Karin and Rainer, Johannes and Bindreither, Daniel and Ritter, Ireen and Gnaiger, Erich and Kofler, Reinhard and Oefner, Peter J. and Renner, Kathrin (2011) Glucocorticoid-induced alterations in mitochondrial membrane properties and respiration in childhood acute lymphoblastic leukemia. Biochimica et biophysica acta 1807 (6), pp. 719-725.

Ehlers, A. and Oker, E. and Bentink, Stefan and Lenze, D. and Stein, H. and Hummel, M. (2008) Histone acetylation and DNA demethylation of B cells result in a Hodgkin-like phenotype. Leukemia 22 (4), pp. 835-841.

F

Fuessl, Marion and Reinders, Jörg and Oefner, Peter J. and Heinze, Jürgen and Schrempf, Alexandra (2014) Selenophosphate-synthetase in the male accessory glands of an insect without selenoproteins. Journal of insect physiology 71, pp. 46-51.

Fink, Florian (2011) Computational analysis of docked protein-protein complexes. PhD, Universität Regensburg.

Fink, Florian and Hochrein, Jochen and Wolowski, Vincent and Merkl, Rainer and Gronwald, Wolfram (2011) PROCOS: Computational analysis of protein–protein complexes. Journal of Computational Chemistry 32 (12), pp. 2575-2586.

Filatova, Alina and Leyerer, Marina and Gorboulev, Valentin and Chintalapati, Chakravarthi and Reinders, Yvonne and Müller, Thomas D. and Srinivasan, Aruna and Hübner, Stefan and Koepsell, Hermann (2009) Novel shuttling domain in a regulator (RSC1A1) of transporter SGLT1 steers cell cycle-dependent nuclear location. Traffic 10 (11), pp. 1599-1618.

Fink, Florian and Ederer, Stephan and Gronwald, Wolfram (2009) Protein-Protein Interaction Analysis by Docking. Algorithms 2 (1), pp. 429-436.

Fischer, Andreas and Baljuls, Angela and Reinders, Jörg and Nekhoroshkova, Elena and Sibilski, Claudia and Metz, Renate and Albert, Stefan and Rajalingam, Krishnaraj and Hekman, Mirko and Rapp, Ulf R. (2009) Regulation of RAF activity by 14-3-3 proteins: RAF kinases associate functionally with both homo- and heterodimeric forms of 14-3-3 proteins. The Journal of biological chemistry 284 (5), pp. 3183-3194.

Fink, Florian and Ederer, S. and Gronwald, Wolfram (2008) Protein-Protein Interaction Prediction. In: Hansmann, U. and Meinke, J., (eds.) From Computational Biophysics to Systems Biology (CBSB08). Proceedings of the NIC Workshop 2008. NIC series, 40. John von Neumann Institute for Computing, Jülich, pp. 209-212. ISBN 978-3-9810843-6-8.

Fink, Florian and Merkl, Rainer and Gronwald, Wolfram (2007) Verification of protein-protein interactions by use of docking techniques. In: Hansmann, U. H. E. and Meinke, J. Mohanty S. and Zimmermann, O., (eds.) From computational biophysics to systems biology (CBSB07). Proceedings of the NIC Workshop 2007. NIC Series, 36. John von Neumann Institute for Computing, Jülich, pp. 125-127. ISBN 978-3-9810843-2-0.

G

Goldgar, D. E. and Healey, S. and Dowty, J. G. and Da Silva, L. and Chen, X. and Spurdle, A. B. and Terry, M. B. and Daly, M. J. and Buys, S. M. and Southey, M. C. and Andrulis, I. and John, E. M. and Khanna, K. K. and Hopper, J. L. and Oefner, Peter J. and Lakhani, S. and Chenevix-Trench, G. (2011) Rare variants in the ATM gene and risk of breast cancer. Breast Cancer Research 13 (4), R73.

Gronwald, Wolfram and Klein, Matthias S. and Zeltner, Raoul and Schulze, Bernd-Detlef and Reinhold, Stephan W. and Deutschmann, Markus and Immervoll, Ann-Kathrin and Böger, Carsten A. and Banas, Bernhard and Eckardt, Kai-Uwe and Oefner, Peter J. (2011) Detection of autosomal dominant polycystic kidney disease by NMR spectroscopic fingerprinting of urine. Kidney international 79 (11), pp. 1244-1253.

Gronwald, Wolfram and Kalbitzer, Hans Robert (2010) Automated protein NMR structure determination in solution. Methods in molecular biology 673, pp. 95-127.

Gimmler, Jens and Gronwald, Wolfram and Möller, Heiko M. and Exner, Thomas E. (2009) Protein structure calculation with a max-min ant system. Chemistry Central Journal 3 (Supl I), P52.

Gronwald, Wolfram and Klein, M. S. and Kaspar, Hannelore and Fagerer, S. R. and Nürnberger, N. and Dettmer, Katja and Bertsch, T. and Oefner, Peter J. (2008) Urinary metabolite quantification employing 2D NMR spectroscopy. Anal. Chem. 80 (23), pp. 9288-9297.

Gronwald, Wolfram and Bomke, J. and Maurer, T. and Domogalla, B. and Huber, F. and Schumann, F. and Kremer, W. and Fink, F. and Rysiok, T. and Frech, M. and Kalbitzer, Hans Robert (2008) Structure of the leech protein saratin and characterization of its binding to collagen. J. Mol. Biol. 381 (4), pp. 913-927.

Gronwald, Wolfram and Hohm, T. and Hoffmann, D. (2008) Evolutionary Pareto-optimization of stably folding peptides. BMC Bioinformatics 9, p. 109.

Gross, E. and Hölzl, Georg and Arnold, N. and Hauenstein, E. and Jacobsen, A. and Schulze, K. and Ramser, J. and Meindl, A. and Kiechle, M. and Oefner, Peter J. (2007) Allelic loss analysis by denaturing high-performance liquid chromatography and electrospray ionization mass spectrometry. Human Mutation 28 (3), pp. 303-311.

Gronwald, Wolfram and Willard, L. and Jellard, T. and Boyko, R. F. and Rajarathnam, K. and Wishart, D. S. and Sonnichsen, F. D. and Sykes, B. D. (1998) CAMRA: chemical shift based computer aided protein NMR assignments. Journal of Biomolecular NMR 12 (3), pp. 395-405.

Gronwald, Wolfram and Loewen, M. C. and Lix, B. and Daugulis, A. J. and Sonnichsen, F. D. and Davies, P. L. and Sykes, B. D. (1998) The solution structure of type II antifreeze protein reveals a new member of the lectin family. Biochemistry 37 (14), pp. 4712-4721.

Gibbs, A. C. and Kondejewski, L. H. and Gronwald, Wolfram and Nip, A. M. and Hodges, R. S. and Sykes, B. D. and Wishart, D. S. (1998) Unusual beta-sheet periodicity in small cyclic peptides. Nature Structural & Molecular Biology (formerly: Nature Structural Biology) 5 (4), pp. 284-288.

Gronwald, Wolfram and Schomburg, D. and Tegge, W. and Wray, V. (1997) Assessment by 1H NMR spectroscopy of the structural behaviour of human parathyroid-hormone-related protein(1-34) and its close relationship with the N-terminal fragments of human parathyroid hormone in solution. Biological Chemistry 378 (12), pp. 1501-1508.

Gronwald, Wolfram and Boyko, R. F. and Sykes, B. D. (1997) GSC: a graphical program for NMR chemical shift comparison. Bioinformatics (formerly: Computer Applications in the Biosciences) 13 (5), pp. 557-558.

Gronwald, Wolfram and Boyko, R. F. and Sönnichsen, F. and Wishart, D. S. and Sykes, B. D. (1997) ORB, a Homology-Based Program for the Prediction of Protein NMR Chemical Shifts. Journal of Biomolecular NMR 10, pp. 165-179.

Gronwald, Wolfram and Chao, H. and Reddy, D. V. and Davies, P. L. and Sykes, B. D. and Sonnichsen, F. D. (1996) NMR characterization of side chain flexibility and backbone structure in the type I antifreeze protein at near freezing temperatures. Biochemistry 35 (51), pp. 16698-16704.

Gronwald, Wolfram and Schomburg, D. and Harder, M. P. and Mayer, H. and Paulsen, J. and Wingender, E. and Wray, V. (1996) Structure of recombinant human parathyroid hormone in solution using multidimensional NMR spectroscopy. Biological Chemistry (formerly: Biological chemistry Hoppe-Seyler) 377 (3), pp. 175-186.

H

Henrich, F. and Singer, Katrin and Poller, K. and Bernhardt, L. and Strobl, C. and Ritter, Axel P. and Gottfried, E. and Peter, Katrin and Dettmer, Katja and Oefner, Peter J. and Bosserhoff, Anja-Katrin and Kreutz, Marina (2016) Suppressive effects of tumor cell-derived 5′-deoxy-5′-methylthioadenosine on human T cells. OncoImmunology 5, e1184802.

Hochrein, Jochen and Zacharias, Helena and Taruttis, Franziska and Samol, Claudia and Engelmann, Julia C. and Spang, Rainer and Oefner, Peter J. and Gronwald, Wolfram (2015) Data Normalization of (1)H NMR Metabolite Fingerprinting Data Sets in the Presence of Unbalanced Metabolite Regulation. J. Proteome Res. 14 (8), pp. 3217-3228.

Holler, Ernst and Butzhammer, Peter and Schmid, Karin and Hundsrucker, Christian and Koestler, Josef and Peter, Katrin and Zhu, Wentao and Sporrer, Daniela and Hehlgans, Thomas and Kreutz, Marina and Holler, Barbara and Wolff, Daniel and Edinger, Matthias and Andreesen, Reinhard and Levine, John E. and Ferrara, James L and Gessner, Andre and Spang, Rainer and Oefner, Peter J. (2014) Metagenomic analysis of the stool microbiome in patients receiving allogeneic SCT: Loss of diversity is associated with use of systemic antibiotics and more pronounced in gastrointestinal GvHD. Biology of Blood and Marrow Transplantation 20 (5), pp. 640-645.

Hochrein, Jochen and Klein, Matthias S. and Zacharias, Helena and Li, Juan and Wijffels, Gene and Schirra, Horst Joachim and Spang, Rainer and Oefner, Peter J. and Gronwald, Wolfram (2012) Performance evaluation of algorithms for the classification of metabolic 1H NMR fingerprints. Journal of proteome research 11 (12), pp. 6242-6251.

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Stämmler, Frank and Gläsner, Joachim and Hiergeist, Andreas and Holler, Ernst and Weber, Daniela and Oefner, Peter J. and Gessner, Andre and Spang, Rainer (2016) Adjusting microbiome profiles for differences in microbial load by spike-in bacteria. Microbiome 4 (1), p. 28.

Simburger, J. M. and Dettmer, Katja and Oefner, Peter J. and Reinders, Jörg (2016) Optimizing the SWATH-MS-workflow for label-free proteomics. J Proteomics.

Sekula, Peggy and Goek, Oemer-Necmi and Quaye, Lydia and Barrios, Clara and Levey, Andrew S. and Römisch-Margl, Werner and Menni, Cristina and Yet, Idil and Gieger, Christian and Inker, Lesley A. and Adamski, Jerzy and Gronwald, Wolfram and Illig, Thomas and Dettmer, Katja and Krumsiek, Jan and Oefner, Peter J. and Valdes, Ana M. and Meisinger, Christa and Coresh, Josef and Spector, Tim D. and Mohney, Robert P. and Suhre, Karsten and Kastenmüller, Gabi and Köttgen, Anna (2015) A Metabolome-Wide Association Study of Kidney Function and Disease in the General Population. Journal of the American Society of Nephrology (JASN) 27 (4), pp. 1175-1188.

Sporrer, Daniela and Gessner, Andre and Hehlgans, Thomas and Oefner, Peter J. and Holler, Ernst (2015) The Microbiome and Allogeneic Stem Cell Transplantation. Current Stem Cell Rep 1 (1), pp. 53-59.

Sporrer, Daniela and Gessner, Andre and Hehlgans, Thomas and Oefner, Peter J. and Holler, Ernst (2015) The Microbiome and Allogeneic Stem Cell Transplantation. Current Stem Cell Reports 1, pp. 53-59.

Sanges, C. and Scheuermann, C. and Zahedi, R. P. and Sickmann, A. and Lamberti, A. and Migliaccio, N. and Baljuls, A. and Marra, M. and Zappavigna, S. and Reinders, Jörg and Rapp, U. and Abbruzzese, A. and Caraglia, M. and Arcari, P. (2012) Raf kinases mediate the phosphorylation of eukaryotic translation elongation factor 1A and regulate its stability in eukaryotic cells. Cell Death and Disease 3, e276.

Schmidt, Jennifer and Riechers, Alexander and Stoll, Raphael and Amann, Thomas and Fink, Florian and Spruss, Thilo and Gronwald, Wolfram and König, Burkhard and Hellerbrand, Claus and Bosserhoff, Anja Katrin (2012) Targeting melanoma metastasis and immunosuppression with a new mode of melanoma inhibitory activity (MIA) protein inhibition. PloS ONE 7 (5), e37941.

Stevens, Axel Peter (2011) Analysis of intermediates of the methionine and polyamine metabolism by liquid chromatography-tandem mass spectrometry. PhD, Universität Regensburg.

Stevens, Axel Peter and Dettmer, Katja and Kirovski, Georgi and Samejima, Keijiro and Hellerbrand, Claus and Bosserhoff, Anja-Katrin and Oefner, Peter J. (2010) Quantification of intermediates of the methionine and polyamine metabolism by liquid chromatography-tandem mass spectrometry in cultured tumor cells and liver biopsies. Journal of chromatography A 1217 (19), pp. 3282-3288.

Stevens, Axel Peter and Spangler, Barbara and Wallner, Susanne and Kreutz, Marina and Dettmer, Katja and Oefner, Peter J. and Bosserhoff, Anja-Katrin (2009) Direct and tumor microenvironment mediated influences of 5'-deoxy-5'-(methylthio)adenosine on tumor progression of malignant melanoma. Journal of cellular biochemistry 106 (2), pp. 210-219.

Schmid, Markus B and Fleischmann, Matthias and D'Elia, Valerio and Reiser, Oliver and Gronwald, Wolfram and Gschwind, Ruth M. (2009) Residual dipolar couplings in short peptidic foldamers: combined analyses of backbone and side-chain conformations and evaluation of structure coordinates of rigid unnatural amino acids. Chembiochem 10 (3), pp. 440-444.

Sinha, H. and David, L. and Pascon, R. C. and Clauder-Münster, S. and Krishnakumar, S. and Nguyen, M. and Shi, G. and Dean, J. and Davis, R. W. and Oefner, Peter J. and McCusker, J. H. and Steinmetz, L. M. (2008) Sequential elimination of major-effect contributors identifies additional quantitative trait loci conditioning high-temperature growth in yeast. Genetics 180 (3), pp. 1661-1670.

Stevens, A. P. and Dettmer, Katja and Wallner, S. and Bosserhoff, Anja-Katrin and Oefner, Peter J. (2008) Quantitative analysis of 5'-deoxy-5'-methylthioadenosine in melanoma cells by liquid chromatography-stable isotope ratio tandem mass spectrometry. Journal of Chromatography B 876 (1), pp. 123-128.

Schonleben, S. and Sickmann, A. and Mueller, M. J. and Reinders, Jörg (2007) Proteome analysis of Apis mellifera royal jelly. Analytical and Bioanalytical Chemistry 389 (4), pp. 1087-1093.

Stahl, S. and Reinders, Yvonne and Asan, E. and Mothes, W. and Conzelmann, E. and Sickmann, A. and Felbor, U. (2007) Proteomic analysis of cathepsin B- and L-deficient mouse brain lysosomes. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1774 (10), pp. 1237-1246.

Scheid, Stefanie and Spang, Rainer (2007) Compensating for unknown confounders in microarray data analysis using filtered permutations. Journal of Computational Biology 14 (5), pp. 669-681.

Stefan, E. and Wiesner, B. and Baillie, G. S. and Mollajew, R. and Henn, V. and Lorenz, D. and Furkert, J. and Santamaria, K. and Nedvetsky, P. and Hundsrucker, Christian and Beyermann, M. and Krause, E. and Pohl, P. and Gall, I. and MacIntyre, A. N. and Bachmann, S. and Houslay, M. D. and Rosenthal, W. and Klussmann, E. (2007) Compartmentalization of cAMP-dependent signaling by phosphodiesterase-4D is involved in the regulation of vasopressin-mediated water reabsorption in renal principal cells. Journal of the American Society of Nephrology (JASN) 18 (1), pp. 199-212.

Schmelzer, K. R. and Wheelock, A. M. and Dettmer, Katja and Morin, D. and Hammock, B. D. (2006) The role of inflammatory mediators in the synergistic toxicity of ozone and 1-nitronaphthalene in rat airways. Environmental Health Perspectives 114 (9), pp. 1354-1360.

Schmelzer, K. R. and Wheelock, A. M. and Dettmer, Katja and Morin, D. and Hammock, B. D. (2006) The role of inflammatory mediators in the synergistic toxicity of ozone and 1-nitronaphthalene in rat airways. Environmental Health Perspectives (EHP) 114 (9), pp. 1354-1360.

Schmitt, S. and Prokisch, H. and Schlunck, T. and Camp, D. G. and Ahting, U. and Waizenegger, T. and Scharfe, C. and Meitinger, T. and Imhof, A. and Neupert, W. and Oefner, Peter J. and Rapaport, D. (2006) Proteome analysis of mitochondrial outer membrane from Neurospora crassa. Proteomics 6 (1), pp. 72-80.

Sivakumaran, T. A. and Shen, P. and Wall, D. P. and Do, B. H. and Kucheria, K. and Oefner, Peter J. (2005) Conservation of the RB1 gene in human and primates. Human Mutation 25 (4), pp. 396-409.

T

Tetens, J. and Heuer, C. and Heyer, I. and Klein, Matthias S. and Gronwald, Wolfram and Junge, W. and Oefner, Peter J. and Thaller, G. and Krattenmacher, N. (2015) Polymorphisms within the APOBR gene are highly associated with milk levels of prognostic ketosis biomarkers in dairy cows. Physiol. Genomics 47 (4), pp. 129-137.

Titze, S. and Schmid, M. and Kottgen, A. and Busch, M. and Floege, J. and Wanner, C. and Kronenberg, F. and Eckardt, K. U. and Eckardt, K. U. and Titze, S. and Prokosch, H. U. and Barthlein, B. and Beck, A. and Ganslandt, T. and Gefeller, O. and Schmid, M. and Koster, J. and Malzer, M. and Schlieper, G. and Eitner, F. and Meisen, S. and Kehl, K. and Arweiler, E. and Floege, J. and Schaeffner, E. and Baid-Agrawal, S. and Schindler, R. and Titze, S. and Hubner, S. and Dienemann, T. and Hilgers, K. F. and Eckardt, K. U. and Kottgen, A. and Schultheiss, U. and Walz, G. and Kielstein, J. T. and Lorenzen, J. and Haller, H. and Sommerer, C. and Zeier, M. and Busch, M. and Paul, K. and Wolf, G. and Hilge, R. and Sitter, T. and Krane, V. and Schmiedeke, D. and Toncar, S. and Wanner, C. and Ekici, A. B. and Reis, A. and Forer, L. and Schonherr, S. and Weissensteiner, H. and Kollertits, B. and Raschenberger, J. and Kronenberg, F. and Gronwald, Wolfram and Zacharias, Helena and Oefner, Peter J. (2015) Disease burden and risk profile in referred patients with moderate chronic kidney disease: composition of the German Chronic Kidney Disease (GCKD) cohort. Nephrol. Dial. Transplant. 30 (3), pp. 441-451.

Tea, Muy-Kheng M. and Kroiss, Regina and Muhr, Daniela and Fuerhauser-Rappaport, Christine and Oefner, Peter J. and Wagner, Teresa M and Singer, Christian F. (2013) Central European BRCA2 mutation carriers: Birth cohort status correlates with onset of breast cancer. Maturitas.

Thomas, Anja and Klein, Matthias S. and Stevens, Axel Peter and Reinders, Yvonne and Hellerbrand, Claus and Dettmer, Katja and Gronwald, Wolfram and Oefner, Peter J. and Reinders, Jörg (2013) Changes in the hepatic mitochondrial and membrane proteome in mice fed a non-alcoholic steatohepatitis inducing diet. Journal of proteomics 80, pp. 107-122.

Thomas, Anja and Stevens, Axel Peter and Klein, Matthias S. and Hellerbrand, Claus and Dettmer, Katja and Gronwald, Wolfram and Oefner, Peter J. and Reinders, Jörg (2012) Early changes in the liver-soluble proteome from mice fed a nonalcoholic steatohepatitis inducing diet. Proteomics 12 (9), pp. 1437-1451.

Thieme, Marian and Lottaz, Claudio and Niederstätter, Harald and Parson, Walther and Spang, Rainer and Oefner, Peter J. (2009) ReseqChip: automated integration of multiple local context probe data from the MitoChip array in mitochondrial DNA sequence assembly. BMC bioinformatics 10, p. 440.

Tavtigian, Sean V. and Oefner, Peter J. and Babikyan, Davit and Hartmann, Anne and Healey, Sue and Le Calvez-Kelm, Florence and Lesueur, Fabienne and Byrnes, Graham B. and Chuang, Shu-Chun and Forey, Nathalie and Feuchtinger, Corinna and Gioia, Lydie and Hall, Janet and Hashibe, Mia and Herte, Barbara and McKay-Chopin, Sandrine and Thomas, Alun and Vallée, Maxime P. and Voegele, Catherine and Webb, Penelope M. and Whiteman, David C. and Sangrajrang, Suleeporn and Hopper, John L. and Southey, Melissa C. and Andrulis, Irene L. and John, Esther M. and Chenevix-Trench, Georgia (2009) Rare, evolutionarily unlikely missense substitutions in ATM confer increased risk of breast cancer. American journal of human genetics 85 (4), pp. 427-446.

Timischl, B. and Dettmer, Katja and Kaspar, H. and Thieme, M. and Oefner, Peter J. (2008) Development of a quantitative, validated capillary electrophoresis-time of flight-mass spectrometry method with integrated high-confidence analyte identification for metabolomics. Electrophoresis 29 (10), pp. 2203-2214.

Timischl, Birgit and Dettmer, Katja and Oefner, Peter J. (2008) Hyphenated mass spectrometry in the analysis of the central carbon metabolism. Analytical and Bioanalytical Chemistry 391, pp. 895-898.

Thompson, D. and Antoniou, A. C. and Jenkins, M. and Marsh, A. and Chen, X. and Wayne, T. and Tesoriero, A. and Milne, R. and Spurdle, A. and Thorstenson, Y. and Southey, M. and Giles, G. G. and Khanna, K. K. and Sambrook, J. and Oefner, Peter J. and Goldgar, D. and Hopper, J. L. and Easton, D. and Chenevix-Trench, G. (2005) Two ATM variants and breast cancer risk. Human Mutation 25 (6), pp. 594-595.

V

Voelxen, N. F. and Walenta, S. and Proescholdt, Martin A. and Dettmer, Katja and Pusch, S. and Mueller-Klieser, W. (2016) Quantitative Imaging of D-2-Hydroxyglutarate in Selected Histological Tissue Areas by a Novel Bioluminescence Technique. Frontiers in Oncology 6, p. 46.

von Bahr, L. and Blennow, O. and Alm, J. and Bjorklund, A. and Malmberg, K. J. and Mougiakakos, D. and Le Blanc, A. and Oefner, Peter J. and Labopin, M. and Ljungman, P. and Le Blanc, K. (2015) Increased incidence of chronic GvHD and CMV disease in patients with vitamin D deficiency before allogeneic stem cell transplantation. Bone Marrow Transplant. 50 (9), pp. 1217-1223.

von Bahr, L. and Blennow, O. and Alm, J. and Bjorklund, A. and Malmberg, K.-J. and Mougiakakos, D. and Le Blanc, A. and Oefner, Peter J. and Labopin, M. and Ljungman, P. and Le Blanc, K. (2015) Increased incidence of chronic GvHD and CMV disease in patients with vitamin D deficiency before allogeneic stem cell transplantation. Bone Marrow Transplant 50 (9), pp. 1217-1223.

Valletta, Daniela and Czech, Barbara and Spruss, Thilo and Ikenberg, Kristian and Wild, Peter J. and Hartmann, Arndt and Weiss, Thomas S. and Oefner, Peter J. and Müller, Martina and Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2014) Regulation and function of the atypical cadherin FAT1 in hepatocellular carcinoma. Carcinogenesis 35, pp. 1407-1415.

Völler, D. and Reinders, Jörg and Meister, Gunter and Bosserhoff, Anja-Katrin (2013) Strong reduction of AGO2 expression in melanoma and cellular consequences. British Journal of Cancer 109, pp. 3116-3124.

van der Goot, Annemieke and Zhu, Wentao and Vázquez-Manrique, Rafael and Seinstra, Renée I and Dettmer, Katja and Michels, Helen and Farina, Francesca and Krijnen, Jasper and Melki, Ronald and Buijsman, Rogier C and Ruiz Silva, Mariana and Thijssen, Karen L and Kema, Ido P and Neri, Christian and Oefner, Peter J. and Nollen, Ellen A A (2012) Delaying aging and the aging-associated decline in protein homeostasis by inhibition of tryptophan degradation. Proceedings of the National Academy of Sciences of the United States of America 109 (37), pp. 14912-7.

Vogelmann, Katja and Drechsel, Gabriele and Bergler, Johannes and Subert, Christa and Philippar, Katrin and Soll, Jürgen and Engelmann, Julia C. and Engelsdorf, Timo and Voll, Lars M. and Hoth, Stefan (2012) Early senescence and cell death in Arabidopsis saul1 mutants involves the PAD4-dependent salicylic acid pathway. Plant physiology 159 (4), pp. 1477-1487.

Voss, Katrin and Stahl, Sonja and Hogan, Benjamin M. and Reinders, Jörg and Schleider, Elisa and Schulte-Merker, Stefan and Felbor, Ute (2009) Functional analyses of human and zebrafish 18-amino acid in-frame deletion pave the way for domain mapping of the cerebral cavernous malformation 3 protein. Human mutation 30 (6), pp. 1003-1011.

Vlad, Marcel O. and Corlan, Alexandru D. and Morán, Federico and Spang, Rainer and Oefner, Peter J. and Ross, John (2009) Kinetic laws, phase-phase expansions, renormalization group, and INR calibration. Proceedings of the National Academy of Sciences of the United States of America 106 (16), pp. 6465-6470.

Vlad, M. O. and Corlan, A. D. and Moran, F. and Oefner, Peter J. and Ross, J. (2008) Incremental parameter evaluation from incomplete data with application to the population pharmacology of anticoagulants. Proceedings of the National Academy of Sciences of the United States of America (PNAS 105 (12), pp. 4627-4632.

Vlad, M. O. and Oefner, Peter J. and Ross, J. (2006) Transition event statistics in genetics and disordered kinetics. Theoretical approaches for extracting rate distributions from experimental data. Journal of Physical Chemistry B 110 (38), pp. 18945-18952.

Vlad, M. O. and Cerofolini, G. and Oefner, Peter J. and Ross, J. (2005) Random activation energy model and disordered kinetics, from static to dynamic disorder. Journal of Physical Chemistry B 109 (45), pp. 21241-21257.

Vlad, M. O. and Szedlacsek, S. E. and Pourmand, N. and Cavalli-Sforza, L. L. and Oefner, Peter J. and Ross, J. (2005) Fisher's theorems for multivariable, time- and space-dependent systems, with applications in population genetics and chemical kinetics. Proceedings of the National Academy of Sciences of the United States of America (PNAS) ISSN 1091-6490 102 (28), pp. 9848-9853.

W

Weber, Daniela and Oefner, Peter J. and Dettmer, Katja and Hiergeist, Andreas and Koestler, Josef and Gessner, Andre and Weber, Markus and Stämmler, Frank and Hahn, Joachim and Wolff, Daniel and Herr, Wolfgang and Holler, Ernst (2016) Rifaximin preserves intestinal microbiota balance in patients undergoing allogeneic stem cell transplantation. Bone Marrow Transplant..

Waldhier, Magdalena C. (2016) Towards Chiralomics: Targeted and Untargeted Gas Chromatography-Mass Spectrometry based Enantioselective Metabolome Analysis. PhD, Universität Regensburg.

Wachsmuth, Christian J. (2015) Implementation and applications of gas chromatography/ atmospheric pressure chemical ionization time-of-flight mass spectrometry in metabolomics. PhD, Universität Regensburg.

Wachsmuth, Christian J. and Hahn, Thomas A. and Oefner, Peter J. and Dettmer, Katja (2015) Enhanced metabolite profiling using a redesigned atmospheric pressure chemical ionization source for gas chromatography coupled to high-resolution time-of-flight mass spectrometry. Anal Bioanal Chem (Analytical and Bioanalytical Chemistry) 407 (22), pp. 6669-6680.

Wolferstetter, Stefanie and Reinders, Jörg and Schwede, Frank and Ruth, Peter and Schinner, Elisabeth and Schlossmann, Jens (2015) Interaction of cCMP with the cGK, cAK and MAPK Kinases in Murine Tissues. PLoS ONE 10 (5), e0126057.

Weber, Daniela and Oefner, Peter J. and Hiergeist, Andreas and Koestler, Josef and Gessner, Andre and Weber, Markus and Hahn, Joachim and Wolff, Daniel and Stämmler, Frank and Spang, Rainer and Herr, Wolfgang and Dettmer, Katja and Holler, Ernst (2015) Low urinary indoxyl sulfate levels early after transplantation reflect a disrupted microbiome and are associated with poor outcome. Blood 126 (14), pp. 1723-1728.

Wachsmuth, Christian J. and Dettmer, Katja and Lang, S. A. and Mycielska, M. E. and Oefner, Peter J. (2014) Continuous water infusion enhances atmospheric pressure chemical ionization of methyl chloroformate derivatives in gas chromatography coupled to time-of-flight mass spectrometry-based metabolomics. Anal. Chem. 86 (18), pp. 9186-9195.

Wingenter, Karina and Trentmann, Oliver and Winschuh, Irina and Hörmiller, Imke I and Heyer, Arnd G. and Reinders, Jörg and Schulz, Alexander and Geiger, Dietmar and Hedrich, Rainer and Neuhaus, H. Ekkehard (2011) A member of the mitogen-activated protein 3-kinase family is involved in the regulation of plant vacuolar glucose uptake. The Plant journal 68 (5), pp. 890-900.

Wachsmuth, Christian and Almstetter, Martin F. and Waldhier, Magdalena Ch. and Gruber, Michael and Nürnberger, Nadine and Oefner, Peter J. and Dettmer, Katja (2011) Performance evaluation of gas chromatography-atmospheric pressure chemical ionization-time-of-flight mass spectrometry for metabolic fingerprinting and profiling. Analytical chemistry 83 (19), pp. 7514-7322.

Waldhier, Magdalena Ch. and Almstetter, Martin F. and Nürnberger, Nadine and Gruber, Michael and Dettmer, Katja and Oefner, Peter J. (2011) Improved enantiomer resolution and quantification of free D-amino acids in serum and urine by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Journal of chromatography A 1218 (28), pp. 4537-4544.

Waldhier, Magdalena Ch. and Dettmer, Katja and Gruber, Michael and Oefner, Peter J. (2010) Comparison of derivatization and chromatographic methods for GC-MS analysis of amino acid enantiomers in physiological samples. Journal of chromatography B 878 (15-16), pp. 1103-1112.

Waldhier, Magdalena Ch. and Gruber, Michael and Dettmer, Katja and Oefner, Peter J. (2009) Capillary electrophoresis and column chromatography in biomedical chiral amino acid analysis. Analytical and bioanalytical chemistry 394 (3), pp. 695-706.

Wei, W. and McCusker, J. H. and Hyman, R. W. and Jones, T. and Ning, Y. and Cao, Z. and Gu, Z. and Bruno, D. and Miranda, M. and Nguyen, M. and Wilhelmy, J. and Komp, C. and Tamse, R. and Wang, X. and Jia, P. and Luedi, P. and Oefner, Peter J. and David, L. and Dietrich, F. S. and Li, Y. and Davis, R. W. and Steinmetz, L. M. (2007) Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789. Proceedings of the National Academy of Sciences of the United States of America (PNAS) 104 (31), pp. 12825-12830.

Waddell, N. and Jonnalagadda, J. and Marsh, A. and Grist, S. and Jenkins, M. and Hobson, K. and Taylor, M. and Lindeman, G. J. and Tavtigian, S. V. and Suthers, G. and Goldgar, D. and Oefner, Peter J. and Taylor, D. and Grimmond, S. and Khanna, K. K. and Chenevix-Trench, G. (2006) Characterization of the breast cancer associated ATM 7271T>G (V2424G) mutation by gene expression profiling. Genes Chromosomes Cancer 45 (12), pp. 1169-1181.

Wray, V. and Federau, T. and Gronwald, Wolfram and Mayer, H. and Schomburg, D. and Tegge, W. and Wingender, E. (1994) The structure of human parathyroid hormone from a study of fragments in solution using 1H NMR spectroscopy and its biological implications. Biochemistry 33 (7), pp. 1684-1693.

Y

Yang, X. and Bentink, S. and Scheid, S. and Spang, Rainer (2006) Similarities of ordered gene lists. Journal of Bioinformatics and Computational BiologyJ Bioinform Comput Biol 4 (3), pp. 693-708.

Yu, B. and Sawyer, N. A. and Chiu, C. and Oefner, Peter J. and Underhill, P. A. (2006) DNA mutation detection using denaturing high-performance liquid chromatography (DHPLC). Current Protocols in Human Genetics 48 (7), 10.1-7.10.14.

Z

Zacharias, Helena U. (2016) Identification of novel biomarkers for predicting outcome of acute and chronic kidney disease. PhD, Universität Regensburg.

Zacharias, Helena and Hochrein, Jochen and Vogl, Franziska C. and Schley, G. and Mayer, F. and Jeleazcov, C. and Eckardt, K. U. and Willam, C. and Oefner, Peter J. and Gronwald, Wolfram (2015) Identification of Plasma Metabolites Prognostic of Acute Kidney Injury after Cardiac Surgery with Cardiopulmonary Bypass. J. Proteome Res. 14 (7), pp. 2897-2905.

Zacharias, Helena and Hochrein, Jochen and Klein, Matthias S. and Samol, Claudia and Oefner, Peter J. and Gronwald, Wolfram (2013) Current Experimental, Bioinformatic and Statistical Methods used in NMR Based Metabolomics. Current Metabolomics 1 (3), pp. 253-268.

Zacharias, Helena and Schley, Gunnar and Hochrein, Jochen and Klein, Matthias S. and Köberle, Carmen and Eckardt, Kai-Uwe and Willam, Carsten and Oefner, Peter J. and Gronwald, Wolfram (2013) Analysis of human urine reveals metabolic changes related to the development of acute kidney injury following cardiac surgery. Metabolomics 9 (3), pp. 697-707.

Zhu, Wentao and Stevens, Axel Peter and Dettmer, Katja and Gottfried, Eva and Hoves, Sabine and Kreutz, Marina and Holler, Ernst and Canelas, André B. and Kema, Ido and Oefner, Peter J. (2011) Quantitative profiling of tryptophan metabolites in serum, urine, and cell culture supernatants by liquid chromatography-tandem mass spectrometry. Analytical and bioanalytical chemistry 401 (10), pp. 3249-3261.

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