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Waldhier, Magdalena C. (2016) Towards Chiralomics: Targeted and Untargeted Gas Chromatography-Mass Spectrometry based Enantioselective Metabolome Analysis. PhD, Universität Regensburg.

Reinders, Y. and Völler, D. and Bosserhoff, Anja-Katrin and Oefner, Peter and Reinders, Jörg (2016) Testing Suitability of Cell Cultures for SILAC-Experiments Using SWATH-Mass Spectrometry. Methods Mol Biol 1394, pp. 101-108.

Raschenberger, J. and Kollerits, B. and Titze, S. and Kottgen, A. and Barthlein, B. and Ekici, A. B. and Forer, L. and Schonherr, S. and Weissensteiner, H. and Haun, M. and Wanner, C. and Eckardt, K. U. and Kronenberg, F. and Eckardt, K. U. and Titze, S. and Meiselbach, H. and Schneider, M. and Dienemann, T. and Prokosch, H. U. and Barthlein, B. and Reis, A. and Ekici, A. B. and Gefeller, O. and Hilgers, K. F. and Hubner, S. and Avendano, S. and Becker-Grosspitsch, D. and Hausknecht, B. and Zitzmann, R. and Weigel, A. and Beck, A. and Ganslandt, T. and Knispel, S. and Dressel, T. and Kottgen, A. and Schultheiss, U. and Meder, S. and Mitsch, E. and Reinhard, U. and Walz, G. and Floege, J. and Schlieper, G. and Saritas, T. and Ernst, S. and Lipski, S. and Schaeffner, E. and Baid-Agrawal, S. and Petzold, K. and Kielstein, J. T. and Haller, H. and Lorenzen, J. and Otto, P. and Sommerer, C. and Follinger, C. and Zeier, M. and Busch, M. and Wolf, G. and Paul, K. and Dittrich, L. and Fuss, R. and Hilge, R. and Sitter, T. and Blank, C. and Wanner, C. and Krane, V. and Toncar, S. and Schmiedeke, D. and Cavitt, D. and Schonowsky, K. and Borner-Klein, A. and Kronenberg, F. and Raschenberger, J. and Kollerits, B. and Forer, L. and Schonherr, S. and Weissensteiner, H. and Oefner, Peter J. and Gronwald, Wolfram and Zacharias, Helena and Schmid, M. and Nadal, J. (2015) Do telomeres have a higher plasticity than thought? Results from the German Chronic Kidney Disease (GCKD) study as a high-risk population. Exp. Gerontol. 72 (162), pp. 162-166.

Clara, Renan Orsati and Assmann, Nadine and Ramos Moreno, Ana Carolina and Coimbra, Janine Baptista and Nurenberger, Nadine and Dettmer-Wilde, Katja and Oefner, Peter and Campa, Ana (2015) Melanocytes are more responsive to IFN-γ and produce higher amounts of kynurenine than melanoma cells. Biological Chemistry )Biol Chem. (In Press)

Wachsmuth, Christian J. (2015) Implementation and applications of gas chromatography/ atmospheric pressure chemical ionization time-of-flight mass spectrometry in metabolomics. PhD, Universität Regensburg.

Sekula, Peggy and Goek, Oemer-Necmi and Quaye, Lydia and Barrios, Clara and Levey, Andrew S. and Römisch-Margl, Werner and Menni, Cristina and Yet, Idil and Gieger, Christian and Inker, Lesley A. and Adamski, Jerzy and Gronwald, Wolfram and Illig, Thomas and Dettmer, Katja and Krumsiek, Jan and Oefner, Peter J. and Valdes, Ana M. and Meisinger, Christa and Coresh, Josef and Spector, Tim D. and Mohney, Robert P. and Suhre, Karsten and Kastenmüller, Gabi and Köttgen, Anna (2015) A Metabolome-Wide Association Study of Kidney Function and Disease in the General Population. Journal of the American Society of Nephrology (JASN) 27 (4), pp. 1175-1188.

Raschenberger, J. and Kollerits, B. and Titze, S. and Kottgen, A. and Barthlein, B. and Ekici, A. B. and Forer, L. and Schonherr, S. and Weissensteiner, H. and Haun, M. and Wanner, C. and Eckardt, K. U. and Kronenberg, F. and Eckardt, K. U. and Titze, S. and Meiselbach, H. and Schneider, M. and Dienemann, T. and Prokosch, H. U. and Barthlein, B. and Reis, A. and Ekici, A. B. and Gefeller, O. and Hilgers, K. F. and Hubner, S. and Avendano, S. and Becker-Grosspitsch, D. and Hausknecht, B. and Zitzmann, R. and Weigel, A. and Beck, A. and Ganslandt, T. and Knispel, S. and Dressel, T. and Kottgen, A. and Schulthei?, U. and Meder, S. and Mitsch, E. and Reinhard, U. and Walz, G. and Floege, J. and Schlieper, G. and Saritas, T. and Ernst, S. and Lipski, S. and Schaeffner, E. and Baid-Agrawal, S. and Petzold, K. and Kielstein, J. T. and Haller, H. and Lorenzen, J. and Otto, P. and Sommerer, C. and Follinger, C. and Zeier, M. and Busch, M. and Wolf, G. and Paul, K. and Dittrich, L. and Fu?, R. and Hilge, R. and Sitter, T. and Blank, C. and Wanner, C. and Krane, V. and Toncar, S. and Schmiedeke, D. and Cavitt, D. and Schonowsky, K. and Borner-Klein, A. and Kronenberg, F. and Raschenberger, J. and Kollerits, B. and Forer, L. and Schonherr, S. and Weissensteiner, H. and Oefner, Peter J. and Gronwald, Wolfram and Zacharias, Helena and Schmid, M. and Nadal, J. (2015) Association of relative telomere length with cardiovascular disease in a large chronic kidney disease cohort: the GCKD study. Atherosclerosis 242 (2), pp. 529-534.

Aßmann, Nadine (2015) Impact of Fanconi-associated protein on the mitochondrial proteome. PhD, Universität Regensburg.

Hochrein, Jochen and Zacharias, Helena and Taruttis, Franziska and Samol, Claudia and Engelmann, Julia C. and Spang, Rainer and Oefner, Peter J. and Gronwald, Wolfram (2015) Data Normalization of (1)H NMR Metabolite Fingerprinting Data Sets in the Presence of Unbalanced Metabolite Regulation. J. Proteome Res. 14 (8), pp. 3217-3228.

Renner, Kathrin and Geiselhöringer, Anna-Lena and Fante, Matthias and Bruss, Christina and Färber, Stephanie and Schönhammer, Gabriele and Peter, Katrin and Singer, Katrin and Andreesen, Reinhard and Hoffmann, Petra and Oefner, Peter J. and Herr, Wolfgang and Kreutz, Marina (2015) Metabolic plasticity of human T cells: Preserved cytokine production under glucose deprivation or mitochondrial restriction, but 2-deoxy-glucose affects effector functions. Eur J Immunol 45 (9), pp. 2504-2516.

Zacharias, Helena and Hochrein, Jochen and Vogl, Franziska C. and Schley, G. and Mayer, F. and Jeleazcov, C. and Eckardt, K. U. and Willam, C. and Oefner, Peter J. and Gronwald, Wolfram (2015) Identification of Plasma Metabolites Prognostic of Acute Kidney Injury after Cardiac Surgery with Cardiopulmonary Bypass. J. Proteome Res. 14 (7), pp. 2897-2905.

Wachsmuth, Christian J. and Hahn, Thomas A. and Oefner, Peter J. and Dettmer, Katja (2015) Enhanced metabolite profiling using a redesigned atmospheric pressure chemical ionization source for gas chromatography coupled to high-resolution time-of-flight mass spectrometry. Anal Bioanal Chem (Analytical and Bioanalytical Chemistry) 407 (22), pp. 6669-6680.

von Bahr, L. and Blennow, O. and Alm, J. and Bjorklund, A. and Malmberg, K. J. and Mougiakakos, D. and Le Blanc, A. and Oefner, Peter J. and Labopin, M. and Ljungman, P. and Le Blanc, K. (2015) Increased incidence of chronic GvHD and CMV disease in patients with vitamin D deficiency before allogeneic stem cell transplantation. Bone Marrow Transplant. 50 (9), pp. 1217-1223.

von Bahr, L. and Blennow, O. and Alm, J. and Bjorklund, A. and Malmberg, K.-J. and Mougiakakos, D. and Le Blanc, A. and Oefner, Peter J. and Labopin, M. and Ljungman, P. and Le Blanc, K. (2015) Increased incidence of chronic GvHD and CMV disease in patients with vitamin D deficiency before allogeneic stem cell transplantation. Bone Marrow Transplant 50 (9), pp. 1217-1223.

Wolferstetter, Stefanie and Reinders, Jörg and Schwede, Frank and Ruth, Peter and Schinner, Elisabeth and Schlossmann, Jens (2015) Interaction of cCMP with the cGK, cAK and MAPK Kinases in Murine Tissues. PLoS ONE 10 (5), e0126057.

Beck, H. and Titze, S. I. and Hubner, S. and Busch, M. and Schlieper, G. and Schultheiss, U. T. and Wanner, C. and Kronenberg, F. and Krane, V. and Eckardt, K. U. and Kottgen, A. and Eckardt, K. U. and Titze, S. and Prokosch, H. U. and Barthlein, B. and Reis, A. and Ekici, A. B. and Gefeller, O. and Hilgers, K. F. and Hubner, S. and Avendano, S. and Becker-Grosspitsch, D. and Hauck, N. and Seuchter, S. A. and Hausknecht, B. and Rittmeier, M. and Weigel, A. and Beck, A. and Ganslandt, T. and Knispel, S. and Dressel, T. and Malzer, M. and Floege, J. and Eitner, F. and Schlieper, G. and Findeisen, K. and Arweiler, E. and Ernst, S. and Unger, M. and Lipski, S. and Schaeffner, E. and Baid-Agrawal, S. and Petzold, K. and Schindler, R. and Kottgen, A. and Schultheiss, U. and Meder, S. and Mitsch, E. and Reinhard, U. and Walz, G. and Haller, H. and Lorenzen, J. and Kielstein, J. T. and Otto, P. and Sommerer, C. and Follinger, C. and Zeier, M. and Wolf, G. and Busch, M. and Paul, K. and Dittrich, L. and Sitter, T. and Hilge, R. and Blank, C. and Wanner, C. and Krane, V. and Schmiedeke, D. and Toncar, S. and Cavitt, D. and Schonowsky, K. and Borner-Klein, A. and Kronenberg, F. and Raschenberger, J. and Kollerits, B. and Forer, L. and Schonherr, S. and Weissensteiner, H. and Oefner, Peter J. and Gronwald, Wolfram and Zacharias, Helena and Schmid, M. (2015) Heart failure in a cohort of patients with chronic kidney disease: the GCKD study. PLoS ONE 10 (4).

Tetens, J. and Heuer, C. and Heyer, I. and Klein, Matthias S. and Gronwald, Wolfram and Junge, W. and Oefner, Peter J. and Thaller, G. and Krattenmacher, N. (2015) Polymorphisms within the APOBR gene are highly associated with milk levels of prognostic ketosis biomarkers in dairy cows. Physiol. Genomics 47 (4), pp. 129-137.

Jing, J. and Kielstein, J. T. and Schultheiss, U. T. and Sitter, T. and Titze, S. I. and Schaeffner, E. S. and McAdams-DeMarco, M. and Kronenberg, F. and Eckardt, K. U. and Kottgen, A. and Eckardt, K. U. and Titze, S. and Prokosch, H. U. and Barthlein, B. and Reis, A. and Ekici, A. B. and Gefeller, O. and Hilgers, K. F. and Hubner, S. and Avendano, S. and Becker-Grosspitsch, D. and Hauck, N. and Seuchter, S. A. and Hausknecht, B. and Rittmeier, M. and Weigel, A. and Beck, A. and Ganslandt, T. and Knispel, S. and Dressel, T. and Malzer, M. and Floege, J. and Eitner, F. and Schlieper, G. and Findeisen, K. and Arweiler, E. and Ernst, S. and Unger, M. and Lipski, S. and Schaeffner, E. and Baid-Agrawal, S. and Petzold, K. and Schindler, R. and Kottgen, A. and Schultheiss, U. and Meder, S. and Mitsch, E. and Reinhard, U. and Walz, G. and Haller, H. and Lorenzen, J. and Kielstein, J. T. and Otto, P. and Sommerer, C. and Follinger, C. and Zeier, M. and Wolf, G. and Busch, M. and Paul, K. and Dittrich, L. and Sitter, T. and Hilge, R. and Blank, C. and Wanner, C. and Krane, V. and Schmiedeke, D. and Toncar, S. and Cavitt, D. and Schonowsky, K. and Borner-Klein, A. and Kronenberg, F. and Raschenberger, J. and Kollerits, B. and Forer, L. and Schonherr, S. and Weissensteiner, H. and Oefner, Peter J. and Gronwald, Wolfram and Zacharias, Helena and Schmid, M. (2015) Prevalence and correlates of gout in a large cohort of patients with chronic kidney disease: the German Chronic Kidney Disease (GCKD) study. Nephrol. Dial. Transplant. 30 (4), pp. 613-621.

Engelmann, Julia C. and Amann, Thomas and Ott-Rötzer, Brigitta and Nützel, Magit and Reinders, Yvonne and Reinders, Jörg and Thasler, Wolfgang E. and Kristl, Theresa and Teufel, Andreas and Huber, Christian G. and Oefner, Peter J. and Spang, Rainer and Hellerbrand, Claus (2015) Causal Modeling of Cancer-Stromal Communication Identifies PAPPA as a Novel Stroma-Secreted Factor Activating NFκB Signaling in Hepatocellular Carcinoma. PLoS Computational Biology 11 (5), pp. 1-22.

Leisz, Sandra and Schulz, Kristin and Erb, Susanne and Oefner, Peter J. and Dettmer, Katja and Mougiakakos, Dimitrios and Wang, Ena and Marincola, Francesco M. and Stehle, Franziska and Seliger, Barbara (2015) Distinct von Hippel-Lindau gene and hypoxia-regulated alterations in gene and protein expression patterns of renal cell carcinoma and their effects on metabolism. Oncotarget 6 (13), pp. 11395-11406.

Titze, S. and Schmid, M. and Kottgen, A. and Busch, M. and Floege, J. and Wanner, C. and Kronenberg, F. and Eckardt, K. U. and Eckardt, K. U. and Titze, S. and Prokosch, H. U. and Barthlein, B. and Beck, A. and Ganslandt, T. and Gefeller, O. and Schmid, M. and Koster, J. and Malzer, M. and Schlieper, G. and Eitner, F. and Meisen, S. and Kehl, K. and Arweiler, E. and Floege, J. and Schaeffner, E. and Baid-Agrawal, S. and Schindler, R. and Titze, S. and Hubner, S. and Dienemann, T. and Hilgers, K. F. and Eckardt, K. U. and Kottgen, A. and Schultheiss, U. and Walz, G. and Kielstein, J. T. and Lorenzen, J. and Haller, H. and Sommerer, C. and Zeier, M. and Busch, M. and Paul, K. and Wolf, G. and Hilge, R. and Sitter, T. and Krane, V. and Schmiedeke, D. and Toncar, S. and Wanner, C. and Ekici, A. B. and Reis, A. and Forer, L. and Schonherr, S. and Weissensteiner, H. and Kollertits, B. and Raschenberger, J. and Kronenberg, F. and Gronwald, Wolfram and Zacharias, Helena and Oefner, Peter J. (2015) Disease burden and risk profile in referred patients with moderate chronic kidney disease: composition of the German Chronic Kidney Disease (GCKD) cohort. Nephrol. Dial. Transplant. 30 (3), pp. 441-451.

Sporrer, Daniela and Gessner, Andre and Hehlgans, Thomas and Oefner, Peter J. and Holler, Ernst (2015) The Microbiome and Allogeneic Stem Cell Transplantation. Current Stem Cell Rep 1 (1), pp. 53-59.

Sporrer, Daniela and Gessner, Andre and Hehlgans, Thomas and Oefner, Peter J. and Holler, Ernst (2015) The Microbiome and Allogeneic Stem Cell Transplantation. Current Stem Cell Reports 1, pp. 53-59.

Ehret, A. and Hochstuhl, D. and Krattenmacher, N. and Tetens, J. and Klein, M. S. and Gronwald, Wolfram and Thaller, G. (2015) Short communication: Use of genomic and metabolic information as well as milk performance records for prediction of subclinical ketosis risk via artificial neural networks. Journal of dairy science 98 (1), pp. 322-329.

Weber, Daniela and Oefner, Peter J. and Hiergeist, Andreas and Koestler, Josef and Gessner, Andre and Weber, Markus and Hahn, Joachim and Wolff, Daniel and Stämmler, Frank and Spang, Rainer and Herr, Wolfgang and Dettmer, Katja and Holler, Ernst (2015) Low urinary indoxyl sulfate levels early after transplantation reflect a disrupted microbiome and are associated with poor outcome. Blood 126 (14), pp. 1723-1728.

Fuessl, Marion and Reinders, Jörg and Oefner, Peter J. and Heinze, Jürgen and Schrempf, Alexandra (2014) Selenophosphate-synthetase in the male accessory glands of an insect without selenoproteins. Journal of insect physiology 71, pp. 46-51.

Wachsmuth, Christian J. and Dettmer, Katja and Lang, S. A. and Mycielska, M. E. and Oefner, Peter J. (2014) Continuous water infusion enhances atmospheric pressure chemical ionization of methyl chloroformate derivatives in gas chromatography coupled to time-of-flight mass spectrometry-based metabolomics. Anal. Chem. 86 (18), pp. 9186-9195.

Oefner, Peter J. (2014) What Identity Crisis? Rapidly Mutating Y-STRs Facilitate Differentiation of Males. Human mutation 35 (8), v.

Dettmer, Katja (2014) Assessment of ionic liquid stationary phases for the GC analysis of fatty acid methyl esters. Analytical and Bioanalytical Chemistry 406, pp. 4931-4939.

Pauly, Diana and Nagel, Benedik M. and Reinders, Jörg and Kilian, Tobias and Wulf, Matthias and Ackermann, Susanne and Ehrenstein, Boris and Zipfel, Peter F. and Skerka, Christine and Weber, Bernhard H. F. (2014) A Novel Antibody against Human Properdin Inhibits the Alternative Complement System and Specifically Detects Properdin from Blood Samples. PLos ONE 9 (5), e96371.

Jitschin, Regina and Braun, Martina and Büttner, Maike and Dettmer, Katja and Bricks, Juliane and Berger, Jana and Eckart, Michael J. and Krause, Stefan W and Oefner, Peter and Le Blanc, Katarina and Mackensen, Andreas and Mougiakakos, Dimitrios (2014) CLL-cells induce IDOhi CD14+HLA-DRlo myeloid derived suppressor cells that inhibit T-cell responses and promote TRegs. Blood.

Holler, Ernst and Butzhammer, Peter and Schmid, Karin and Hundsrucker, Christian and Koestler, Josef and Peter, Katrin and Zhu, Wentao and Sporrer, Daniela and Hehlgans, Thomas and Kreutz, Marina and Holler, Barbara and Wolff, Daniel and Edinger, Matthias and Andreesen, Reinhard and Levine, John E. and Ferrara, James L and Gessner, Andre and Spang, Rainer and Oefner, Peter J. (2014) Metagenomic analysis of the stool microbiome in patients receiving allogeneic SCT: Loss of diversity is associated with use of systemic antibiotics and more pronounced in gastrointestinal GvHD. Biology of Blood and Marrow Transplantation 20 (5), pp. 640-645.

Valletta, Daniela and Czech, Barbara and Spruss, Thilo and Ikenberg, Kristian and Wild, Peter J. and Hartmann, Arndt and Weiss, Thomas S. and Oefner, Peter J. and Müller, Martina and Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2014) Regulation and function of the atypical cadherin FAT1 in hepatocellular carcinoma. Carcinogenesis 35, pp. 1407-1415.

Ruedel, Anke and Stark, Klaus and Kaufmann, Simone and Bauer, Richard and Reinders, Jörg and Rovensky, Jozef and Blazicková, Stanislava and Oefner, Peter J. and Bosserhoff, Anja Katrin (2014) N-cadherin promoter polymorphisms and risk of osteoarthritis. FASEB journal 28 (2), pp. 683-691.

Bedal, Konstanze B. and Grässel, Susanne and Oefner, Peter J. and Reinders, Jörg and Reichert, Torsten E. and Bauer, Richard (2014) Collagen XVI induces expression of MMP9 via modulation of AP-1 transcription factors and facilitates invasion of oral squamous cell carcinoma. Plos One 9 (1), e86777.

Klootwijk, Enriko D. and Reichold, Markus and Helip-Wooley, Amanda and Tolaymat, Asad and Broeker, Carsten and Robinette, Steven and Reinders, Jörg and Peindl, Dominika Elisabeth and Renner, Kathrin and Eberhart, Karin and Aßmann, Nadine and Oefner, Peter J. and Dettmer, Katja and Sterner, Christina and Schroeder, Josef and Zorger, Niels and Witzgall, Ralph and Reinhold, Stephan W. and Stanescu, Horia C. and Bockenhauer, Detlef and Jaureguiberry, Gracian and Courtneidge, Holly and Hall, Andrew M. and Wijeyesekera, Anisha and Holmes, Elaine and Nicholson, Jeremy K. and O´Brien, Kevin and Bernardini, Isa and Krasnewich, Donna M. and Arcos-Burgos, Mauricio and Izumi, Yuichiro and Nonoguchi, Hiroshi and Jia, Yuzhi and Reddy, Janardan K. and Ilya, Mohammad and Unwin, Robert J. and Gahl, William A. and Warth, Richard and Kleta, Robert (2014) Mistargeting of Peroxisomal EHHADH and Inherited Renal Fanconi's Syndrome. The New England Journal of Medicine 370, pp. 129-138.

Paul, Katharina and Kretzschmar, Daniel and Yilmaz, Atilla and Bärthlein, Barbara and Titze, Stephanie and Wolf, Gunter and Busch, Martin (2013) Circulating dendritic cell precursors in chronic kidney disease: a cross-sectional study. BMC nephrology 14, p. 274.

Czech, Barbara and Dettmer, Katja and Valletta, Daniela and Saugspier, Michael Sebastian and Koch, Andreas and Stevens, Axel Peter and Thasler, Wolfgang E. and Müller, Martina and Oefner, Peter J. and Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2013) Expression and function of methylthioadenosine phosphorylase in chronic liver disease. PloS ONE 8 (12), e80703.

Klein, Matthias S. and Almstetter, Martin F. and Nürnberger, Nadine and Sigl, Gregor and Gronwald, Wolfram and Wiedemann, Steffi and Dettmer, Katja and Oefner, Peter J. (2013) Correlations between milk and plasma levels of amino and carboxylic acids in dairy cows. Journal of Proteome Research 12 (11), pp. 5223-5232.

Burghardt, Tillmann and Kastner, Jürgen and Suleiman, Hani and Rivera-Milla, Eric and Stepanova, Natalya and Lottaz, Claudio and Kubitza, Marion and Böger, Carsten A. and Schmidt, Sarah and Gorski, Mathias and de Vries, Uwe and Schmidt, Helga and Hertting, Irmgard and Kopp, Jeffrey and Rascle, Anne and Moser, Markus and Heid, Iris M. and Warth, Richard and Spang, Rainer and Wegener, Joachim and Mierke, Claudia T. and Englert, Christoph and Witzgall, Ralph (2013) LMX1B is essential for the maintenance of differentiated podocytes in adult kidneys. Journal of the American Society of Nephrology : JASN 24 (11), pp. 1830-1848.

Völler, D. and Reinders, Jörg and Meister, Gunter and Bosserhoff, Anja-Katrin (2013) Strong reduction of AGO2 expression in melanoma and cellular consequences. British Journal of Cancer 109, pp. 3116-3124.

Tea, Muy-Kheng M. and Kroiss, Regina and Muhr, Daniela and Fuerhauser-Rappaport, Christine and Oefner, Peter J. and Wagner, Teresa M and Singer, Christian F. (2013) Central European BRCA2 mutation carriers: Birth cohort status correlates with onset of breast cancer. Maturitas.

Dettmer, Katja and Vogl, Franziska C. and Ritter, Axel P. and Zhu, Wentao and Nürnberger, Nadine and Kreutz, Marina and Oefner, Peter J. and Gronwald, Wolfram and Gottfried, Eva (2013) Distinct metabolic differences between various human cancer and primary cells. ELECTROPHORESIS 34 (19), pp. 2836-2847.

Zacharias, Helena and Hochrein, Jochen and Klein, Matthias S. and Samol, Claudia and Oefner, Peter J. and Gronwald, Wolfram (2013) Current Experimental, Bioinformatic and Statistical Methods used in NMR Based Metabolomics. Current Metabolomics 1 (3), pp. 253-268.

Kreutz, Marina and Gottfried, Eva and Lang, Sven A. and Renner, Kathrin and Bosserhoff, Anja-Katrin and Gronwald, Wolfram and Rehli, Michael and Einhell, Sabine and Gedig, Isabell and Singer, Katrin and Seilbeck, Anton and Mackensen, Andreas and Grauer, Oliver and Hau, Peter and Dettmer, Katja and Andreesen, Reinhard and Oefner, Peter (2013) New aspects of an old drug: Diclofenac targets MYC and glucose metabolism in tumor cells. PLoS ONE 8 (7), e66987.

Zacharias, Helena and Schley, Gunnar and Hochrein, Jochen and Klein, Matthias S. and Köberle, Carmen and Eckardt, Kai-Uwe and Willam, Carsten and Oefner, Peter J. and Gronwald, Wolfram (2013) Analysis of human urine reveals metabolic changes related to the development of acute kidney injury following cardiac surgery. Metabolomics 9 (3), pp. 697-707.

Bauer, Karin and Gosau, Martin and Reinders, Jörg and Oefner, Peter J. and Reichert, Torsten E. and Bauer, Richard (2013) Presenilin1/gamma-secretase modulates P-cadherin processing and influences cell adhesion in oral squamous cell carcinoma cell lines. Carcinogenesis 34, pp. 2622-2628.

Klein, Matthias S. and Oefner, Peter J. and Gronwald, Wolfram (2013) MetaboQuant: a tool combining individual peak calibration and outlier detection for accurate metabolite quantification in 1D (1)H and (1)H-(13)C HSQC NMR spectra. BioTechniques 54 (5), pp. 251-256.

Limm, Katharina and Ott, Corinna and Wallner, Susanne and Mueller, Daniel W. and Oefner, Peter J. and Hellerbrand, Claus and Bosserhoff, Anja-Katrin (2013) Deregulation of protein methylation in melanoma. European journal of cancer 49 (6), pp. 1305-1313.

Chirasani, Sridhar Reddy and Leukel, Petra and Gottfried, Eva and Hochrein, Jochen and Stadler, Katrin and Neumann, Bernhard and Oefner, Peter J. and Gronwald, Wolfram and Bogdahn, Ulrich and Hau, Peter and Kreutz, Marina and Grauer, Oliver M. (2013) Diclofenac inhibits lactate formation and efficiently counteracts local immune suppression in a murine glioma model. International Journal of Cancer 132 (4), pp. 843-853.

Demir, Fatih and Horntrich, Claudia and Blachutzik, Jörg O and Scherzer, Sönke and Reinders, Yvonne and Kierszniowska, Sylwia and Schulze, Waltraud X. and Harms, Gregory S. and Hedrich, Rainer and Geiger, Dietmar and Kreuzer, Ines (2013) Arabidopsis nanodomain-delimited ABA signaling pathway regulates the anion channel SLAH3. Proceedings of the National Academy of Sciences of the United States of America 110 (20), pp. 8296-82301.

Pietzner, Julia and Baer, P. C. and Duecker, R. P. and Merscher, M. B. and Satzger-Prodinger, C. and Bechmann, I. and Wietelmann, A. and Del Turco, D. and Doering, C. and Kuci, S. and Bader, P. and Schirmer, Sophie and Zielen, S. and Schubert, R. (2013) Bone marrow transplantation improves the outcome of Atm-deficient mice through the migration of ATM-competent cells. Human molecular genetics 22 (3), pp. 493-507.

Thomas, Anja and Klein, Matthias S. and Stevens, Axel Peter and Reinders, Yvonne and Hellerbrand, Claus and Dettmer, Katja and Gronwald, Wolfram and Oefner, Peter J. and Reinders, Jörg (2013) Changes in the hepatic mitochondrial and membrane proteome in mice fed a non-alcoholic steatohepatitis inducing diet. Journal of proteomics 80, pp. 107-122.

Oefner, Peter J. and Hölzl, Georg and Shen, Peidong and Shpirer, Isaac and Gefel, Dov and Lavi, Tal and Wolf, Eilon and Cohen, Jonathan and Cinnioglu, Cengiz and Underhill, Peter A and Rosenberg, Noah A. and Hochrein, Jochen and Granka, Julie M. and Hillel, Jossi and Feldman, Marcus W. (2013) Genetics and the history of the Samaritans: Y-chromosomal microsatellites and genetic affinity between Samaritans and Cohanim. Human Biology 40.

Lowin, Torsten and Zhu, Wentao and Dettmer-Wilde, Katja and Straub, Rainer H. (2012) Cortisol-mediated adhesion of synovial fibroblasts is dependent on the degradation of anandamide and activation of the endocannabinoid system. Arthritis and rheumatism 64 (12), pp. 3867-3876.

Hochrein, Jochen and Klein, Matthias S. and Zacharias, Helena and Li, Juan and Wijffels, Gene and Schirra, Horst Joachim and Spang, Rainer and Oefner, Peter J. and Gronwald, Wolfram (2012) Performance evaluation of algorithms for the classification of metabolic 1H NMR fingerprints. Journal of proteome research 11 (12), pp. 6242-6251.

van der Goot, Annemieke and Zhu, Wentao and Vázquez-Manrique, Rafael and Seinstra, Renée I and Dettmer, Katja and Michels, Helen and Farina, Francesca and Krijnen, Jasper and Melki, Ronald and Buijsman, Rogier C and Ruiz Silva, Mariana and Thijssen, Karen L and Kema, Ido P and Neri, Christian and Oefner, Peter J. and Nollen, Ellen A A (2012) Delaying aging and the aging-associated decline in protein homeostasis by inhibition of tryptophan degradation. Proceedings of the National Academy of Sciences of the United States of America 109 (37), pp. 14912-7.

Escalante-Pérez, María and Jaborsky, Mario and Reinders, Jörg and Kurzai, Oliver and Hedrich, Rainer and Ache, Peter (2012) Poplar extrafloral nectar is protected against plant and human pathogenic fungus. Molecular plant 5 (5), pp. 1157-1159.

Vogelmann, Katja and Drechsel, Gabriele and Bergler, Johannes and Subert, Christa and Philippar, Katrin and Soll, Jürgen and Engelmann, Julia C. and Engelsdorf, Timo and Voll, Lars M. and Hoth, Stefan (2012) Early senescence and cell death in Arabidopsis saul1 mutants involves the PAD4-dependent salicylic acid pathway. Plant physiology 159 (4), pp. 1477-1487.

Thomas, Anja and Stevens, Axel Peter and Klein, Matthias S. and Hellerbrand, Claus and Dettmer, Katja and Gronwald, Wolfram and Oefner, Peter J. and Reinders, Jörg (2012) Early changes in the liver-soluble proteome from mice fed a nonalcoholic steatohepatitis inducing diet. Proteomics 12 (9), pp. 1437-1451.

Eckardt, Kai-Uwe and Bärthlein, Barbara and Baid-Agrawal, Seema and Beck, Andreas and Busch, Martin and Eitner, Frank and Ekici, Arif B and Floege, Jürgen and Gefeller, Olaf and Haller, Hermann and Hilge, Robert and Hilgers, Karl F and Kielstein, Jan T and Krane, Vera and Köttgen, Anna and Kronenberg, Florian and Oefner, Peter J. and Prokosch, Hans-Ulrich and Reis, André and Schmid, Matthias and Schaeffner, Elke and Schultheiss, Ulla T and Seuchter, Susanne A and Sitter, Thomas and Sommerer, Claudia and Walz, Gerd and Wanner, Christoph and Wolf, Gunter and Zeier, Martin and Titze, Stephanie (2012) The German Chronic Kidney Disease (GCKD) study: design and methods. Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association 27 (4), pp. 1454-1460.

Primas, Helga and Kroiss, Regina and Kalteis, Karin and Rappaport, Christine and Muhr, Daniela and Primas, Christian and Kubista, Ernst and Horvat, Reinhard and Oefner, Peter J. and Singer, Christian F. and Wagner, Teresa (2012) Impact of lifestyle factors on preneoplastic changes in prophylactic oophorectomies of BRCA mutation carriers. European journal of cancer prevention : the official journal of the European Cancer Prevention Organisation (ECP) 21 (2), pp. 199-204.

Sanges, C. and Scheuermann, C. and Zahedi, R. P. and Sickmann, A. and Lamberti, A. and Migliaccio, N. and Baljuls, A. and Marra, M. and Zappavigna, S. and Reinders, Jörg and Rapp, U. and Abbruzzese, A. and Caraglia, M. and Arcari, P. (2012) Raf kinases mediate the phosphorylation of eukaryotic translation elongation factor 1A and regulate its stability in eukaryotic cells. Cell Death and Disease 3, e276.

Almstetter, Martin F. (2012) Tools and applications for one- and two-dimensional
gas chromatography – time-of-flight mass spectrometry-based metabolomics.
PhD, Universität Regensburg.

Almstetter, Martin F. and Oefner, Peter J. and Dettmer, Katja (2012) Comprehensive two-dimensional gas chromatography in metabolomics. Analytical and bioanalytical chemistry 402 (6), pp. 1993-2013.

Klein, Matthias S. and Buttchereit, Nina and Miemczyk, Sebastian P and Immervoll, Ann-Kathrin and Louis, Caridad and Wiedemann, Steffi and Junge, Wolfgang and Thaller, Georg and Oefner, Peter J. and Gronwald, Wolfram (2012) NMR metabolomic analysis of dairy cows reveals milk glycerophosphocholine to phosphocholine ratio as prognostic biomarker for risk of ketosis. Journal of proteome research 11 (2), pp. 1373-1381.

Dettmer, Katja and Stevens, Axel Peter and Fagerer, Stephan R and Kaspar, Hannelore and Oefner, Peter J. (2012) Amino acid analysis in physiological samples by GC-MS with propyl chloroformate derivatization and iTRAQ-LC-MS/MS. Methods in molecular biology 828, pp. 165-181.

Dettmer, Katja and Stevens, Axel Peter and Fagerer, Stephan R and Kaspar, Hannelore and Oefner, Peter J. (2012) Amino acid analysis in physiological samples by GC-MS with propyl chloroformate derivatization and iTRAQ-LC-MS/MS. Methods in molecular biology 828, pp. 165-181.

Almstetter, Martin F. and Oefner, Peter J. and Dettmer, Katja (2012) Metabolic fingerprinting using comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Methods in molecular biology 815, pp. 399-411.

Schmidt, Jennifer and Riechers, Alexander and Stoll, Raphael and Amann, Thomas and Fink, Florian and Spruss, Thilo and Gronwald, Wolfram and König, Burkhard and Hellerbrand, Claus and Bosserhoff, Anja Katrin (2012) Targeting melanoma metastasis and immunosuppression with a new mode of melanoma inhibitory activity (MIA) protein inhibition. PloS ONE 7 (5), e37941.

Wingenter, Karina and Trentmann, Oliver and Winschuh, Irina and Hörmiller, Imke I and Heyer, Arnd G. and Reinders, Jörg and Schulz, Alexander and Geiger, Dietmar and Hedrich, Rainer and Neuhaus, H. Ekkehard (2011) A member of the mitogen-activated protein 3-kinase family is involved in the regulation of plant vacuolar glucose uptake. The Plant journal 68 (5), pp. 890-900.

Zhu, Wentao and Stevens, Axel Peter and Dettmer, Katja and Gottfried, Eva and Hoves, Sabine and Kreutz, Marina and Holler, Ernst and Canelas, André B. and Kema, Ido and Oefner, Peter J. (2011) Quantitative profiling of tryptophan metabolites in serum, urine, and cell culture supernatants by liquid chromatography-tandem mass spectrometry. Analytical and bioanalytical chemistry 401 (10), pp. 3249-3261.

Landfried, Karin and Zhu, Wentao and Waldhier, Magdalena Ch. and Schulz, Ute and Ammer, Julia and Holler, Barbara and Wolff, Daniel and Edinger, Matthias and Peter, Katrin and Kreutz, Marina and Andreesen, Reinhard and Oefner, Peter J. and Holler, Ernst (2011) Tryptophan catabolism is associated with acute GVHD after human allogeneic stem cell transplantation and indicates activation of indoleamine 2,3-dioxygenase. Blood 118 (26), pp. 6971-6974.

Wachsmuth, Christian and Almstetter, Martin F. and Waldhier, Magdalena Ch. and Gruber, Michael and Nürnberger, Nadine and Oefner, Peter J. and Dettmer, Katja (2011) Performance evaluation of gas chromatography-atmospheric pressure chemical ionization-time-of-flight mass spectrometry for metabolic fingerprinting and profiling. Analytical chemistry 83 (19), pp. 7514-7322.

Almstetter, Martin F. and Appel, Inka and Dettmer, Katja and Gruber, Michael and Oefner, Peter J. (2011) Comparison of two algorithmic data processing strategies for metabolic fingerprinting by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Journal of chromatography A 1218 (39), pp. 7031-7038.

Appel, Inka and Gronwald, Wolfram and Spang, Rainer (2011) Estimating classification probabilities in high-dimensional diagnostic studies. Bioinformatics 27 (18), pp. 2563-2570.

Stevens, Axel Peter (2011) Analysis of intermediates of the methionine and polyamine metabolism by liquid chromatography-tandem mass spectrometry. PhD, Universität Regensburg.

Fink, Florian (2011) Computational analysis of docked protein-protein complexes. PhD, Universität Regensburg.

Waldhier, Magdalena Ch. and Almstetter, Martin F. and Nürnberger, Nadine and Gruber, Michael and Dettmer, Katja and Oefner, Peter J. (2011) Improved enantiomer resolution and quantification of free D-amino acids in serum and urine by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Journal of chromatography A 1218 (28), pp. 4537-4544.

Gronwald, Wolfram and Klein, Matthias S. and Zeltner, Raoul and Schulze, Bernd-Detlef and Reinhold, Stephan W. and Deutschmann, Markus and Immervoll, Ann-Kathrin and Böger, Carsten A. and Banas, Bernhard and Eckardt, Kai-Uwe and Oefner, Peter J. (2011) Detection of autosomal dominant polycystic kidney disease by NMR spectroscopic fingerprinting of urine. Kidney international 79 (11), pp. 1244-1253.

Klein, Matthias S. and Dorn, Christoph and Saugspier, Michael Sebastian and Hellerbrand, Claus and Oefner, Peter J. and Gronwald, Wolfram (2011) Discrimination of steatosis and NASH in mice using nuclear magnetic resonance spectroscopy. Metabolomics 7 (2), pp. 237-246.

Eberhart, Karin and Rainer, Johannes and Bindreither, Daniel and Ritter, Ireen and Gnaiger, Erich and Kofler, Reinhard and Oefner, Peter J. and Renner, Kathrin (2011) Glucocorticoid-induced alterations in mitochondrial membrane properties and respiration in childhood acute lymphoblastic leukemia. Biochimica et biophysica acta 1807 (6), pp. 719-725.

Fink, Florian and Hochrein, Jochen and Wolowski, Vincent and Merkl, Rainer and Gronwald, Wolfram (2011) PROCOS: Computational analysis of protein–protein complexes. Journal of Computational Chemistry 32 (12), pp. 2575-2586.

Jrad-Lamine, Aicha and Henry-Berger, Joelle and Gourbeyre, Pascal and Damon-Soubeyrand, Christelle and Lenoir, Alain and Combaret, Lydie and Saez, Fabrice and Kocer, Ayhan and Tone, Shigenobu and Fuchs, Dietmar and Zhu, Wentao and Oefner, Peter J. and Munn, David H. and Mellor, Andrew L. and Gharbi, Najoua and Cadet, Rémi and Aitken, R. John and Drevet, Joël R. (2011) Deficient tryptophan catabolism along the kynurenine pathway reveals that the epididymis is in a unique tolerogenic state. The Journal of biological chemistry 286 (10), pp. 8030-8042.

Kirovski, Georgi and Stevens, Axel Peter and Czech, Barbara and Dettmer, Katja and Weiss, Thomas S. and Wild, Peter and Hartmann, Arndt and Bosserhoff, Anja-Katrin and Oefner, Peter J. and Hellerbrand, Claus (2011) Down-regulation of methylthioadenosine phosphorylase (MTAP) induces progression of hepatocellular carcinoma via accumulation of 5'-deoxy-5'-methylthioadenosine (MTA). The American journal of pathology 178 (3), pp. 1145-1152.

Dettmer, Katja and Nürnberger, Nadine and Kaspar, Hannelore and Gruber, Michael and Almstetter, Martin F. and Oefner, Peter J. (2011) Metabolite extraction from adherently growing mammalian cells for metabolomics studies: optimization of harvesting and extraction protocols. Analytical and bioanalytical chemistry 399 (3), pp. 1127-1139.

Pleiser, Sandra and Rock, Rebecca and Wellmann, Jutta and Gessler, Manfred and Kerkhoff, Eugen (2010) Expression patterns of the mouse Spir-2 actin nucleator. Gene expression patterns 10 (7-8), pp. 345-350.

Dettmer, Katja and Almstetter, Martin F. and Appel, Inka and Nürnberger, Nadine and Schlamberger, Gregor and Gronwald, Wolfram and Meyer, Heinrich H. D. and Oefner, Peter J. (2010) Comparison of serum versus plasma collection in gas chromatography--mass spectrometry-based metabolomics. Electrophoresis 31 (14), pp. 2365-2373.

Stevens, Axel Peter and Dettmer, Katja and Kirovski, Georgi and Samejima, Keijiro and Hellerbrand, Claus and Bosserhoff, Anja-Katrin and Oefner, Peter J. (2010) Quantification of intermediates of the methionine and polyamine metabolism by liquid chromatography-tandem mass spectrometry in cultured tumor cells and liver biopsies. Journal of chromatography A 1217 (19), pp. 3282-3288.

Waldhier, Magdalena Ch. and Dettmer, Katja and Gruber, Michael and Oefner, Peter J. (2010) Comparison of derivatization and chromatographic methods for GC-MS analysis of amino acid enantiomers in physiological samples. Journal of chromatography B 878 (15-16), pp. 1103-1112.

Klein, Matthias S. and Almstetter, Martin F. and Schlamberger, G. and Nürnberger, Nadine and Dettmer, Katja and Oefner, Peter J. and Meyer, H. H. D. and Wiedemann, Steffi and Gronwald, Wolfram (2010) Nuclear magnetic resonance and mass spectrometry-based milk metabolomics in dairy cows during early and late lactation. Journal of dairy science 93 (4), pp. 1539-1550.

Amann, Thomas and Bataille, Frauke and Spruss, Thilo and Dettmer, Katja and Wild, Peter J. and Liedtke, Christian and Mühlbauer, Marcus and Kiefer, Paul and Oefner, Peter J. and Trautwein, Christian and Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2010) Reduced expression of fibroblast growth factor receptor 2IIIb in hepatocellular carcinoma induces a more aggressive growth. The American journal of pathology 176 (3), pp. 1433-42.

Dietl, Katrin and Renner, Kathrin and Dettmer, Katja and Timischl, Birgit and Eberhart, Karin and Dorn, Christoph and Hellerbrand, Claus and Kastenberger, Michael and Kunz-Schughart, Leoni A. and Oefner, Peter J. and Andreesen, Reinhard and Gottfried, Eva and Kreutz, Marina (2010) Lactic acid and acidification inhibit TNF secretion and glycolysis of human monocytes. Journal of immunology 184 (3), pp. 1200-1209.

Gronwald, Wolfram and Kalbitzer, Hans Robert (2010) Automated protein NMR structure determination in solution. Methods in molecular biology 673, pp. 95-127.

Lottaz, Claudio and Beier, Dagmar and Meyer, Katharina and Kumar, Praveen and Hermann, Andreas and Schwarz, Johannes and Junker, Markus and Oefner, Peter J. and Bogdahn, Ulrich and Wischhusen, J and Spang, Rainer and Storch, Alexander and Beier, Christoph P. (2010) Transcriptional profiles of CD133+ and CD133- glioblastoma-derived cancer stem cell lines suggest different cells of origin. Cancer research 70 (5), pp. 2030-2040.

Thieme, Marian and Lottaz, Claudio and Niederstätter, Harald and Parson, Walther and Spang, Rainer and Oefner, Peter J. (2009) ReseqChip: automated integration of multiple local context probe data from the MitoChip array in mitochondrial DNA sequence assembly. BMC bioinformatics 10, p. 440.

Filatova, Alina and Leyerer, Marina and Gorboulev, Valentin and Chintalapati, Chakravarthi and Reinders, Yvonne and Müller, Thomas D. and Srinivasan, Aruna and Hübner, Stefan and Koepsell, Hermann (2009) Novel shuttling domain in a regulator (RSC1A1) of transporter SGLT1 steers cell cycle-dependent nuclear location. Traffic 10 (11), pp. 1599-1618.

Tavtigian, Sean V. and Oefner, Peter J. and Babikyan, Davit and Hartmann, Anne and Healey, Sue and Le Calvez-Kelm, Florence and Lesueur, Fabienne and Byrnes, Graham B. and Chuang, Shu-Chun and Forey, Nathalie and Feuchtinger, Corinna and Gioia, Lydie and Hall, Janet and Hashibe, Mia and Herte, Barbara and McKay-Chopin, Sandrine and Thomas, Alun and Vallée, Maxime P. and Voegele, Catherine and Webb, Penelope M. and Whiteman, David C. and Sangrajrang, Suleeporn and Hopper, John L. and Southey, Melissa C. and Andrulis, Irene L. and John, Esther M. and Chenevix-Trench, Georgia (2009) Rare, evolutionarily unlikely missense substitutions in ATM confer increased risk of breast cancer. American journal of human genetics 85 (4), pp. 427-446.

Almstetter, Martin F. and Appel, Inka and Gruber, Michael and Lottaz, Claudio and Timischl, Birgit and Spang, Rainer and Dettmer, Katja and Oefner, Peter J. (2009) Integrative normalization and comparative analysis for metabolic fingerprinting by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Analytical chemistry 81 (14), pp. 5731-5739.

Kaspar, Hannelore and Dettmer, Katja and Chan, Queenie and Daniels, Scott and Nimkar, Subodh and Daviglus, Martha L. and Stamler, Jeremiah and Elliott, Paul and Oefner, Peter J. (2009) Urinary amino acid analysis: a comparison of iTRAQ-LC-MS/MS, GC-MS, and amino acid analyzer. Journal of chromatography B 877 (20-21), pp. 1838-1846.

Gimmler, Jens and Gronwald, Wolfram and Möller, Heiko M. and Exner, Thomas E. (2009) Protein structure calculation with a max-min ant system. Chemistry Central Journal 3 (Supl I), P52.

Waldhier, Magdalena Ch. and Gruber, Michael and Dettmer, Katja and Oefner, Peter J. (2009) Capillary electrophoresis and column chromatography in biomedical chiral amino acid analysis. Analytical and bioanalytical chemistry 394 (3), pp. 695-706.

Voss, Katrin and Stahl, Sonja and Hogan, Benjamin M. and Reinders, Jörg and Schleider, Elisa and Schulte-Merker, Stefan and Felbor, Ute (2009) Functional analyses of human and zebrafish 18-amino acid in-frame deletion pave the way for domain mapping of the cerebral cavernous malformation 3 protein. Human mutation 30 (6), pp. 1003-1011.

Baskaran, Kumaran and Kirchhöfer, Renate and Huber, Fritz and Trenner, Jochen and Brunner, Konrad and Gronwald, Wolfram and Neidig, Klaus-Peter and Kalbitzer, Hans Robert (2009) Chemical shift optimization in multidimensional NMR spectra by AUREMOL-SHIFTOPT. Journal of biomolecular NMR 43 (4), pp. 197-210.

Amann, Thomas and Maegdefrau, Ulrike and Hartmann, Arndt and Agaimy, Abbas and Marienhagen, Jörg and Weiss, Thomas S. and Stoeltzing, Oliver and Warnecke, Christina and Schölmerich, Jürgen and Oefner, Peter J. and Kreutz, Marina and Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2009) GLUT1 expression is increased in hepatocellular carcinoma and promotes tumorigenesis. The American journal of pathology 174 (4), pp. 1544-1552.

Vlad, Marcel O. and Corlan, Alexandru D. and Morán, Federico and Spang, Rainer and Oefner, Peter J. and Ross, John (2009) Kinetic laws, phase-phase expansions, renormalization group, and INR calibration. Proceedings of the National Academy of Sciences of the United States of America 106 (16), pp. 6465-6470.

Kaput, Jim and Cotton, Richard G. H. and Hardman, Lauren and Watson, Michael and Al Aqeel, Aida I. and Al-Aama, Jumana Y. and Al-Mulla, Fahd and Alonso, Santos and Aretz, Stefan and Auerbach, Arleen D. and Bapat, Bharati and Bernstein, Inge T. and Bhak, Jong and Bleoo, Stacey L. and Blöcker, Helmut and Brenner, Steven E. and Burn, John and Bustamante, Mariona and Calzone, Rita and Cambon-Thomsen, Anne and Cargill, Michele and Carrera, Paola and Cavedon, Lawrence and Cho, Yoon Shin and Chung, Yeun-Jun and Claustres, Mireille and Cutting, Garry and Dalgleish, Raymond and den Dunnen, Johan T. and Díaz, Carlos and Dobrowolski, Steven and dos Santos, M. Rosário N. and Ekong, Rosemary and Flanagan, Simon B. and Flicek, Paul and Furukawa, Yoichi and Genuardi, Maurizio and Ghang, Ho and Golubenko, Maria V. and Greenblatt, Marc S. and Hamosh, Ada and Hancock, John M. and Hardison, Ross and Harrison, Terence M. and Hoffmann, Robert and Horaitis, Rania and Howard, Heather J. and Barash, Carol Isaacson and Izagirre, Neskuts and Jung, Jongsun and Kojima, Toshio and Laradi, Sandrine and Lee, Yeon-Su and Lee, Jong-Young and Gil-da-Silva-Lopes, Vera L. and Macrae, Finlay A. and Maglott, Donna and Marafie, Makia J. and Marsh, Steven G. E. and Matsubara, Yoichi and Messiaen, Ludwine M. and Möslein, Gabriela and Netea, Mihai G. and Norton, Melissa L. and Oefner, Peter J. and Oetting, William S. and O'Leary, James C. and de Ramirez, Ana Maria Oller and Paalman, Mark H. and Parboosingh, Jillian and Patrinos, George P. and Perozzi, Giuditta and Phillips, Ian R. and Povey, Sue and Prasad, Suyash and Qi, Ming and Quin, David J. and Ramesar, Rajkumar S. and Richards, C Sue and Savige, Judith and Scheible, Dagmar G. and Scott, Rodney J. and Seminara, Daniela and Shephard, Elizabeth A. and Sijmons, Rolf H. and Smith, Timothy D. and Sobrido, María-Jesús and Tanaka, Toshihiro and Tavtigian, Sean V. and Taylor, Graham R. and Teague, Jon and Töpel, Thoralf and Ullman-Cullere, Mollie and Utsunomiya, Joji and van Kranen, Henk J. and Vihinen, Mauno and Webb, Elizabeth and Weber, Thomas K. and Yeager, Meredith and Yeom, Young I. and Yim, Seon-Hee and Yoo, Hyang-Sook (2009) Planning the human variome project: the Spain report. Human mutation 30 (4), pp. 496-510.

Fink, Florian and Ederer, Stephan and Gronwald, Wolfram (2009) Protein-Protein Interaction Analysis by Docking. Algorithms 2 (1), pp. 429-436.

Anchang, Benedict Nchang and Sadeh, Mohammad Javad and Jacob, Juby and Tresch, Achim and Vlad, Marcel O. and Oefner, Peter J. and Spang, Rainer (2009) Modeling the temporal interplay of molecular signaling and gene expression by using dynamic nested effects models. Proceedings of the National Academy of Sciences of the United States of America 106 (16), pp. 6447-6452.

Stevens, Axel Peter and Spangler, Barbara and Wallner, Susanne and Kreutz, Marina and Dettmer, Katja and Oefner, Peter J. and Bosserhoff, Anja-Katrin (2009) Direct and tumor microenvironment mediated influences of 5'-deoxy-5'-(methylthio)adenosine on tumor progression of malignant melanoma. Journal of cellular biochemistry 106 (2), pp. 210-219.

Schmid, Markus B and Fleischmann, Matthias and D'Elia, Valerio and Reiser, Oliver and Gronwald, Wolfram and Gschwind, Ruth M. (2009) Residual dipolar couplings in short peptidic foldamers: combined analyses of backbone and side-chain conformations and evaluation of structure coordinates of rigid unnatural amino acids. Chembiochem 10 (3), pp. 440-444.

Kaspar, Hannelore and Dettmer, Katja and Gronwald, Wolfram and Oefner, Peter J. (2009) Advances in amino acid analysis. Analytical and bioanalytical chemistry 393 (2), pp. 445-452.

Fischer, Andreas and Baljuls, Angela and Reinders, Jörg and Nekhoroshkova, Elena and Sibilski, Claudia and Metz, Renate and Albert, Stefan and Rajalingam, Krishnaraj and Hekman, Mirko and Rapp, Ulf R. (2009) Regulation of RAF activity by 14-3-3 proteins: RAF kinases associate functionally with both homo- and heterodimeric forms of 14-3-3 proteins. The Journal of biological chemistry 284 (5), pp. 3183-3194.

Hartmann, Anne and Thieme, Marian and Nanduri, Lahiri K and Stempfl, Thomas and Moehle, Christoph and Kivisild, Toomas and Oefner, Peter J. (2009) Validation of microarray-based resequencing of 93 worldwide mitochondrial genomes. Human mutation 30 (1), pp. 115-122.

Baumann, Fusun and Leukel, Petra and Doerfelt, Anett and Beier, Christoph P. and Dettmer, Katja and Oefner, Peter J. and Kastenberger, Michael and Kreutz, Marina and Nickl-Jockschat, Thomas and Bogdahn, Ulrich and Bosserhoff, Anja-Katrin and Hau, Peter (2009) Lactate promotes glioma migration by TGF-beta2-dependent regulation of matrix metalloproteinase-2. Neuro-oncology 11 (4), pp. 368-380.

Gronwald, Wolfram and Klein, M. S. and Kaspar, Hannelore and Fagerer, S. R. and Nürnberger, N. and Dettmer, Katja and Bertsch, T. and Oefner, Peter J. (2008) Urinary metabolite quantification employing 2D NMR spectroscopy. Anal. Chem. 80 (23), pp. 9288-9297.

Gronwald, Wolfram and Bomke, J. and Maurer, T. and Domogalla, B. and Huber, F. and Schumann, F. and Kremer, W. and Fink, F. and Rysiok, T. and Frech, M. and Kalbitzer, Hans Robert (2008) Structure of the leech protein saratin and characterization of its binding to collagen. J. Mol. Biol. 381 (4), pp. 913-927.

Kaspar, Hannelore and Dettmer, Katja and Gronwald, Wolfram and Oefner, Peter J. (2008) Automated GC-MS analysis of free amino acids in biological fluids. J. Chromatogr. B 870 (2), pp. 222-232.

Gronwald, Wolfram and Hohm, T. and Hoffmann, D. (2008) Evolutionary Pareto-optimization of stably folding peptides. BMC Bioinformatics 9, p. 109.

Ried, Andreas and Gronwald, Wolfram and Trenner, Jochen M. and Brunner, Konrad and Neidig, Klaus-Peter and Kalbitzer, Hans Robert (2004) Improved simulation of NOESY spectra by RELAX-JT2 including effects of J-coupling, transverse relaxation and chemical shift anisotropy. Journal of Biomolecular NMR 30 (2), pp. 121-131.

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