PERMOL: Restraint-based protein homology modeling using DYANA or CNS.

DOI to cite this document:: 10.5283/epub.1668

Möglich, Andreas ; Weinfurtner, Daniel ; Gronwald, Werner ; Maurer, Thilo ; Kalbitzer, Hans-Robert

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Date of publication of this fulltext: 05 Aug 2009 13:31

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Abstract

PERMOL is a new restraint-based program for homology modeling of proteins. Restraints are generated from the information contained in structures of homologous template proteins. Employing the restraints generated by PERMOL, three-dimensional structures are obtained using MD programs such as DYANA or CNS. In contrast to other programs PERMOL is mainly based on the use of dihedral angle information ...