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Kramm, Kevin ; Schröder, Tim ; Gouge, Jerome ; Vera, Andrés Manuel ; Gupta, Kapil ; Heiss, Florian B. ; Liedl, Tim ; Engel, Christoph ; Berger, Imre ; Vannini, Alessandro ; Tinnefeld, Philip ; Grohmann, Dina

DNA origami-based single-molecule force spectroscopy elucidates RNA Polymerase III pre-initiation complex stability

Kramm, Kevin, Schröder, Tim, Gouge, Jerome , Vera, Andrés Manuel , Gupta, Kapil , Heiss, Florian B. , Liedl, Tim , Engel, Christoph, Berger, Imre , Vannini, Alessandro , Tinnefeld, Philip und Grohmann, Dina (2020) DNA origami-based single-molecule force spectroscopy elucidates RNA Polymerase III pre-initiation complex stability. Nature Communications 11 (2828), S. 1-12.

Veröffentlichungsdatum dieses Volltextes: 02 Nov 2020 11:29
Artikel
DOI zum Zitieren dieses Dokuments: 10.5283/epub.44036


Zusammenfassung

The TATA-binding protein (TBP) and a transcription factor (TF) IIB-like factor are important constituents of all eukaryotic initiation complexes. The reason for the emergence and strict requirement of the additional initiation factor Bdp1 in the RNA polymerase (RNAP) III system, however, remained elusive. A poorly studied aspect in this context is the effect of DNA strain arising from DNA ...

The TATA-binding protein (TBP) and a transcription factor (TF) IIB-like factor are important constituents of all eukaryotic initiation complexes. The reason for the emergence and strict requirement of the additional initiation factor Bdp1 in the RNA polymerase (RNAP) III system, however, remained elusive. A poorly studied aspect in this context is the effect of DNA strain arising from DNA compaction and transcriptional activity on initiation complex formation. We made use of a DNA origami-based force clamp to follow the assembly of human initiation complexes in the RNAP II and RNAP III systems at the single-molecule level under piconewton forces. We demonstrate that TBP-DNA complexes are force-sensitive and TFIIB is sufficient to stabilise TBP on a strained promoter. In contrast, Bdp1 is the pivotal component that ensures stable anchoring of initiation factors, and thus the polymerase itself, in the RNAP III system. Thereby, we offer an explanation for the crucial role of Bdp1 for the high transcriptional output of RNAP III. TATA-binding protein (TBP) and a transcription factor (TF) IIB-like factor are important constituents of all eukaryotic initiation complexes. Here, the authors use a DNA origami-based force clamp to investigate the assembly dynamics of human initiation complexes in the RNAP II and RNAP III systems at the single-molecule level under pico newton forces.



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Details

DokumentenartArtikel
Titel eines Journals oder einer ZeitschriftNature Communications
Verlag:Nature
Ort der Veröffentlichung:LONDON
Band:11
Nummer des Zeitschriftenheftes oder des Kapitels:2828
Seitenbereich:S. 1-12
Datum5 Juni 2020
InstitutionenBiologie und Vorklinische Medizin > Institut für Biochemie, Genetik und Mikrobiologie > Lehrstuhl für Mikrobiologie (Archaeenzentrum) > Prof. Dr. Dina Grohmann
Biologie und Vorklinische Medizin > Institut für Biochemie, Genetik und Mikrobiologie > Lehrstuhl für Mikrobiologie (Archaeenzentrum) > Prof. Dr. Dina Grohmann
Identifikationsnummer
WertTyp
10.1038/s41467-020-16702-xDOI
Stichwörter / KeywordsTATA-BINDING PROTEIN; TRANSCRIPTION INITIATION; CRYSTAL-STRUCTURE; STRUCTURAL BASIS; PROMOTER DNA; YEAST; TBP; REVEALS; COMPONENTS; TFIIIB;
Dewey-Dezimal-Klassifikation500 Naturwissenschaften und Mathematik > 570 Biowissenschaften, Biologie
StatusVeröffentlicht
BegutachtetJa, diese Version wurde begutachtet
An der Universität Regensburg entstandenJa
URN der UB Regensburgurn:nbn:de:bvb:355-epub-440362
Dokumenten-ID44036

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