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Gomez, M. V. ; Ruiz-Castañeda, M. ; Nitschke, Philipp ; Gschwind, Ruth Maria ; Jiménez, M. A.

Insights Into the Micelle-Induced β-Hairpin-to-α-Helix Transition of a LytA-Derived Peptide by Photo-CIDNP Spectroscopy

Gomez, M. V. , Ruiz-Castañeda, M., Nitschke, Philipp , Gschwind, Ruth Maria and Jiménez, M. A. (2021) Insights Into the Micelle-Induced β-Hairpin-to-α-Helix Transition of a LytA-Derived Peptide by Photo-CIDNP Spectroscopy. International Journal of Molecular Sciences 22 (13), p. 6666.

Date of publication of this fulltext: 02 Jul 2021 10:20
Article
DOI to cite this document: 10.5283/epub.46271


Abstract

A choline-binding module from pneumococcal LytA autolysin, LytA(239-252,) was reported to have a highly stable nativelike beta-hairpin in aqueous solution, which turns into a stable amphipathic alpha-helix in the presence of micelles. Here, we aim to obtain insights into this DPC-micelle triggered beta-hairpin-to-alpha-helix conformational transition using photo-CIDNP NMR experiments. Our results ...

A choline-binding module from pneumococcal LytA autolysin, LytA(239-252,) was reported to have a highly stable nativelike beta-hairpin in aqueous solution, which turns into a stable amphipathic alpha-helix in the presence of micelles. Here, we aim to obtain insights into this DPC-micelle triggered beta-hairpin-to-alpha-helix conformational transition using photo-CIDNP NMR experiments. Our results illustrate the dependency between photo-CIDNP phenomena and the light intensity in the sample volume, showing that the use of smaller-diameter (2.5 mm) NMR tubes instead of the conventional 5 mm ones enables more efficient illumination for our laser-diode light setup. Photo-CIDNP experiments reveal different solvent accessibility for the two tyrosine residues, Y249 and Y250, the latter being less accessible to the solvent. The cross-polarization effects of these two tyrosine residues of LytA(239-252) allow for deeper insights and evidence their different behavior, showing that the Y250 aromatic side chain is involved in a stronger interaction with DPC micelles than Y249 is. These results can be interpreted in terms of the DPC micelle disrupting the aromatic stacking between W241 and Y250 present in the nativelike beta-hairpin, hence initiating conversion towards the alpha-helix structure. Our photo-CIDNP methodology represents a powerful tool for observing residue-level information in switch peptides that is difficult to obtain by other spectroscopic techniques.



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Details

Item typeArticle
Journal or Publication TitleInternational Journal of Molecular Sciences
Publisher:MDPI
Place of Publication:BASEL
Volume:22
Number of Issue or Book Chapter:13
Page Range:p. 6666
Date2021
InstitutionsChemistry and Pharmacy > Institut für Organische Chemie > Arbeitskreis Prof. Dr. Ruth Gschwind
Identification Number
ValueType
10.3390/ijms22136666DOI
KeywordsATOMIC-RESOLUTION STRUCTURE; NMR-SPECTROSCOPY; AMINO-ACIDS; PROTEIN; ILLUMINATION; RELAXATION; DISEASE; SWITCH; photo-CIDNP; NMR spectroscopy; in situ illumination; LytA-derived peptide; tyrosine side chains; molecular motion; conformational transition
Dewey Decimal Classification500 Science > 540 Chemistry & allied sciences
StatusPublished
RefereedYes, this version has been refereed
Created at the University of RegensburgPartially
URN of the UB Regensburgurn:nbn:de:bvb:355-epub-462710
Item ID46271

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