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Biophysical characterization and solution structure of the cannulae-forming protein CanA from the hyperthermophilic archaeon Pyrodictium abyssi
Munte, Claudia E., Kreitner, Raphael, Rachel, Reinhard, Stetter, Karl O., Kremer, Werner and Kalbitzer, Hans Robert
(2025)
Biophysical characterization and solution structure of the cannulae-forming protein CanA from the hyperthermophilic archaeon Pyrodictium abyssi.
Scientific Reports 15, p. 28563.
Date of publication of this fulltext: 06 Aug 2025 08:11
Article
DOI to cite this document: 10.5283/epub.77515
Abstract
CanA from Pyrodictium abyssi, the main constituent of the extracellular protein network of this archaeon, forms a hollow-fiber network in the presence of divalent ions. The polymerization of CanA induced by divalent ions is characterized by (at least) two processes with rate constants of 0.19 and 0.03 ms-1 at 298 K with a critical monomer concentration of 2.48 µM. A non-polymerizing mutant, ...
CanA from Pyrodictium abyssi, the main constituent of the extracellular protein network of this archaeon, forms a hollow-fiber network in the presence of divalent ions. The polymerization of CanA induced by divalent ions is characterized by (at least) two processes with rate constants of 0.19 and 0.03 ms-1 at 298 K with a critical monomer concentration of 2.48 µM. A non-polymerizing mutant, K1-CanA, was created, and the NMR solution structure could be determined by multidimensional NMR spectroscopy. It mainly consists of β-pleated sheets and 2 small α-helices, arranged as β1β2β3β4α1β5β6α2β7β8β9β10β11β12β13. Of the 13 β-strands, 8 form a non-canonical jellyroll class I fold. Several interaction sites for divalent ions could be identified by [1H, 15N]-SOFAST-HMQC spectroscopy in two main surface areas called BA1 and BA2, located at both ends of the jellyroll. The binding of divalent ions to the monomer induces significant local structural changes in these areas. In general, the affinities for Mg2+-ions to the sites in BA1 are smaller than those for Ca2+-ions. In contrast, in binding area BA2, Mg2+- and Ca2+-affinities are similar. The data suggest a conformational selection mechanism induced by ion binding as a first step in the polymerization process of CanA.
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| Item type | Article | ||||
| Journal or Publication Title | Scientific Reports | ||||
| Publisher: | Springer | ||||
|---|---|---|---|---|---|
| Open Access Type: | DEAL (Springer Gold) | ||||
| Volume: | 15 | ||||
| Page Range: | p. 28563 | ||||
| Date | 5 August 2025 | ||||
| Institutions | Biology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie Biology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie > Prof. Dr. Dr. Hans Robert Kalbitzer | ||||
| Identification Number |
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| Keywords | Biochemistry Biophysics Biotechnology Microbiology Structural biology | ||||
| Dewey Decimal Classification | 500 Science > 570 Life sciences | ||||
| Status | Published | ||||
| Refereed | Yes, this version has been refereed | ||||
| Created at the University of Regensburg | Yes | ||||
| URN of the UB Regensburg | urn:nbn:de:bvb:355-epub-775152 | ||||
| Item ID | 77515 |
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