ReseqChip: automated integration of multiple local context probe data from the MitoChip array in mitochondrial DNA sequence assembly

URN to cite this document:: urn:nbn:de:bvb:355-epub-306621
DOI to cite this document:: 10.5283/epub.30662

Thieme, Marian ; Lottaz, Claudio ; Niederstätter, Harald ; Parson, Walther ; Spang, Rainer ; Oefner, Peter J.

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Date of publication of this fulltext: 18 Aug 2014 09:47

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Abstract

Background: The Affymetrix MitoChip v2.0 is an oligonucleotide tiling array for the resequencing of the human mitochondrial (mt) genome. For each of 16,569 nucleotide positions of the mt genome it holds two sets of four 25-mer probes each that match the heavy and the light strand of a reference mt genome and vary only at their central position to interrogate all four possible alleles. In ...