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Number of items at this level: 261.

2019

Sun, Xueni, Heinrich, Paul, Berger, Raffaela, Oefner, Peter J. and Dettmer, Katja (2019) Quantification and 13C-Tracer analysis of total reduced glutathione by HPLC-QTOFMS/MS. Anal. Chim. Acta 1080, pp. 127-137. Fulltext not available.

Rohweder, Bettina, Lehmann, Gerhard, Eichner, Norbert, Polen, T., Rajendran, Chitra, Ruperti, Fabian, Linde, Mona, Treiber, Thomas, Jung, Oona, Dettmer, Katja , Meister, Gunter, Bott, M., Gronwald, Wolfram and Sterner, Reinhard (2019) Library Selection with a Randomized Repertoire of (βα)8-Barrel Enzymes Results in Unexpected Induction of Gene Expression. Biochemistry 58 (41), pp. 4207-4217. Fulltext not available.

Renner, Kathrin, Bruss, Christina, Schnell, Annette, Koehl, Gudrun, Becker, Holger M., Fante, Matthias, Menevse, Ayse-Nur, Kauer, Nathalie, Blazquez, Raquel, Hacker, Lisa, Decking, Sonja-Maria, Bohn, Toszka, Faerber, Stephanie, Evert, Katja, Aigle, Lisa, Amslinger, Sabine, Landa, Maria, Krijgsman, Oscar, Rozeman, Elisa A., Brummer, Christina, Siska, Peter J., Singer, Katrin, Pektor, Stefanie, Miederer, Matthias, Peter, Katrin, Gottfried, Eva, Herr, Wolfgang, Marchiq, Ibtisam, Pouyssegur, Jacques, Roush, William R., Ong, SuFey, Warren, Sarah, Pukrop, Tobias, Beckhove, Philipp, Lang, Sven A., Bopp, Tobias, Blank, Christian U., Cleveland, John L., Oefner, Peter J., Dettmer, Katja, Selby, Mark and Kreutz, Marina (2019) Restricting Glycolysis Preserves T Cell Effector Functions and Augments Checkpoint Therapy. Cell Reports 29 (1), 135-150.e9.

Blazquez, R., Rietkotter, E., Wenske, B., Wlochowitz, D., Sparrer, D., Vollmer, E., Muller, G., Seegerer, J., Sun, Xueni, Dettmer, Katja , Barrantes-Freer, A., Stange, L., Utpatel, K., Bleckmann, A., Treiber, H., Bohnenberger, H., Lenz, C., Schulz, M., Reimelt, C., Hackl, C., Grade, M., Buyuktas, D., Siam, L., Balkenhol, M., Stadelmann, C., Kube, D., Krahn, M. P., Proescholdt, M. A., Riemenschneider, M. J., Evert, M., Oefner, Peter J. , Klein, C. A., Hanisch, U. K., Binder, C. and Pukrop, Tobias (2019) LEF1 supports metastatic brain colonization by regulating glutathione metabolism and increasing ROS resistance in breast cancer. Int. J. Cancer. Fulltext not available.

Altenbuchinger, Michael, Zacharias, Helena , Solbrig, S., Schaefer, Andreas, Buyukozkan, M., Schultheiss, U. T., Kotsis, F., Kottgen, A., Spang, Rainer, Oefner, Peter J. , Krumsiek, J. and Gronwald, Wolfram (2019) A multi-source data integration approach reveals novel associations between metabolites and renal outcomes in the German Chronic Kidney Disease study. Sci Rep 9 (1), p. 13954.

Fazzini, F., Lamina, C., Fendt, L., Schultheiss, U. T., Kotsis, F., Hicks, A. A., Meiselbach, H., Weissensteiner, H., Forer, L., Krane, V., Eckardt, K. U., Kottgen, A., Kronenberg, F., Eckardt, K. U., Meiselbach, H., Schneider, M., Dienemann, T., Prokosch, H. U., Barthlein, B., Beck, A., Ganslandt, T., Reis, A., Ekici, A. B., Avendano, S., Becker-Grosspitsch, D., Alberth-Schmidt, U., Hausknecht, B., Zitzmann, R., Weigel, A., Walz, G., Kottgen, A., Schultheiss, U., Kotsis, F., Meder, S., Mitsch, E., Reinhard, U., Floege, J., Schlieper, G., Saritas, T., Ernst, S., Beaujean, N., Schaeffner, E., Baid-Agrawal, S., Theisen, K., Haller, H., Menne, J., Zeier, M., Sommerer, C., Woitke, R., Wolf, G., Busch, M., Fuss, R., Sitter, T., Blank, C., Wanner, C., Krane, V., Borner-Klein, A., Bauer, B., Kronenberg, F., Raschenberger, J., Kollerits, B., Forer, L., Schonherr, S., Weissensteiner, H., Oefner, Peter J. , Gronwald, Wolfram , Zacharias, Helena , Schmid, M. and Nadal, J. (2019) Mitochondrial DNA copy number is associated with mortality and infections in a large cohort of patients with chronic kidney disease. Kidney Int. 96 (2), pp. 480-488. Fulltext not available.

Singer, Katrin, Dettmer, Katja , Unger, Petra, Schoenhammer, Gabriele, Renner, Kathrin, Peter, Katrin, Siska, Peter J., Berneburg, Mark , Herr, Wolfgang, Oefner, Peter J. , Karrer, Sigrid, Kreutz, Marina and Datz, Elisabeth (2019) Topical Diclofenac Reprograms Metabolism and Immune Cell Infiltration in Actinic Keratosis. Front Oncol 9, p. 605.

Berger, Raffaela S., Ellmann, Lisa, Reinders, Joerg, Kreutz, Marina, Stempfl, Thomas, Oefner, Peter J. and Dettmer, Katja (2019) Degradation of D-2-hydroxyglutarate in the presence of isocitrate dehydrogenase mutations. Scientific Reports 9 (1), pp. 1-11.

Kleo, K., Dimitrova, L., Oker, E., Tomaszewski, N., Berg, E., Taruttis, Franziska, Engelmann, Julia C. , Schwarzfischer, Philipp, Reinders, Jörg , Spang, Rainer, Gronwald, Wolfram , Oefner, Peter J. and Hummel, Michael (2019) Identification of ADGRE5 as discriminating MYC target between Burkitt lymphoma and diffuse large B-cell lymphoma. BMC Cancer 19 (1), p. 322.

Aubin, Matthias (2019) Glukokortikoide und akute lymphatische Leukämie:
Ein proteomischer Ansatz.
PhD, Universität Regensburg.

Hayek, I., Fischer, F., Schulze-Luehrmann, J., Dettmer, Katja , Sobotta, K., Schatz, V., Kohl, L., Boden, K., Lang, R., Oefner, Peter J. , Wirtz, S., Jantsch, Johnathan and Luhrmann, A. (2019) Limitation of TCA Cycle Intermediates Represents an Oxygen-Independent Nutritional Antibacterial Effector Mechanism of Macrophages. Cell Rep 26 (13), pp. 3502-3510.

Zacharias, Helena, Altenbuchinger, Michael, Schultheiss, U. T., Samol, Claudia, Kotsis, F., Poguntke, I., Sekula, P., Krumsiek, J., Kottgen, A., Spang, Rainer, Oefner, Peter J. and Gronwald, Wolfram (2019) A Novel Metabolic Signature To Predict the Requirement of Dialysis or Renal Transplantation in Patients with Chronic Kidney Disease. Journal of Proteome Research. Fulltext not available.

Ugele, I., Cardenas-Conejo, Z. E., Hammon, K., Wehrstein, M., Bruss, C., Peter, K., Singer, K., Gottfried, E., Boesch, J., Oefner, Peter J. , Dettmer, Katja , Renner, K. and Kreutz, Marina (2019) D-2-Hydroxyglutarate and L-2-Hydroxyglutarate Inhibit IL-12 Secretion by Human Monocyte-Derived Dendritic Cells. International Journal of Molecular Sciences 20 (3), p. 742.

Kieninger, Martn, Gruber, M., Knott, I., Dettmer, Katja , Oefner, Peter J. , Bele, S., Wendl, C., Tuemmler, S., Graf, B. and Eissnert, C. (2019) Incidence of Arterial Hypotension in Patients Receiving Peroral or Continuous Intra-arterial Nimodipine After Aneurysmal or Perimesencephalic Subarachnoid Hemorrhage. Neurocrit Care. Fulltext not available.

Farowski, F., Solbach, P., Tsakmaklis, A., Brodesser, S., Cruz Aguilar, M. R., Cornely, O. A., Dettmer, Katja , Higgins, P. G., Suerbaum, S., Jazmati, N., Oefner, Peter J. and Vehreschild, M. J. G. T. (2019) Potential biomarkers to predict outcome of faecal microbiota transfer for recurrent Clostridioides difficile infection. Digestive and Liver Disease. Fulltext not available.

Hinreiner, Sophie (2019) Effect of different mutations in the ATM gene on the cellular response to ionizing radiation. PhD, Universität Regensburg.

Naskali, E., Dettmer, Katja , Oefner, Peter J. , Pereira, P. A. B., Krohn, K., Auvinen, P., Ranki, A. and Kluger, N. (2019) Serotonin and tryptophan metabolites, autoantibodies and gut microbiome in APECED. Endocrine Connections 8 (1), pp. 69-77.

2018

Heinrich, Paul, Kohler, Christian , Ellmann, Lisa, Kuerner, Paul, Spang, Rainer, Oefner, Peter J. and Dettmer, Katja (2018) Correcting for natural isotope abundance and tracer impurity in MS-, MS/MS- and high-resolution-multiple-tracer-data from stable isotope labeling experiments with IsoCorrectoR. Scientific Reports 8 (17910), pp. 1-10.

Zdralevic, M., Brand, A., Di Ianni, L., Dettmer, Katja , Reinders, Jörg , Singer, K., Peter, K., Schnell, A., Bruss, C., Decking, S. M., Koehl, G., Felipe-Abrio, B., Durivault, J., Bayer, P., Evangelista, M., O'Brien, T., Oefner, Peter J. , Renner, K., Pouyssegur, J. and Kreutz, Marina (2018) Double genetic disruption of lactate dehydrogenases A and B is required to ablate the. J. Biol. Chem. 293 (41), pp. 15947-15961. Fulltext not available.

Gerthofer, V., Kreutz, Marina , Renner, Kathrin, Jachnik, Birgit, Dettmer, Katja , Oefner, Peter J. , Riemenschneider, Markus J., Proescholdt, Martin A. , Vollmann-Zwerenz, Arabel, Hau, Peter and Seliger, Corinna (2018) Combined Modulation of Tumor Metabolism by Metformin and Diclofenac in Glioma. Int J Mol Sci 19 (9).

Zacharias, Helena , Altenbuchinger, Michael and Gronwald, Wolfram (2018) Statistical Analysis of NMR Metabolic Fingerprints: Established Methods and Recent Advances. Metabolites 8 (3).

Farowski, F., Els, G., Tsakmaklis, A., Higgins, P. G. , Kahlert, C. R., Stein-Thoeringer, C. K., Bobardt, J. S., Dettmer-Wilde, Katja , Oefner, Peter J. , Vehreschild, J. J. and Vehreschild, M. J. G. T. (2018) Assessment of urinary 3-indoxyl sulfate as a marker for gut microbiota diversity and abundance of Clostridiales. Gut Microbes, pp. 1-9. Fulltext not available.

Weber, Daniela, Hiergeist, Andreas , Weber, Markus, Dettmer, Katja , Wolff, Daniel, Hahn, Joachim, Herr, Wolfgang, Gessner, Andre and Holler, Ernst (2018) Detrimental effect of broad-spectrum antibiotics on intestinal microbiome diversity in patients after allogeneic stem cell transplantation: Lack of commensal sparing antibiotics. Clin. Infect. Dis..

Cho, H., Berger, B., Peng, J., Galitzine, C., Vitek, O., Beltran, P. M. J., Cristea, I. M., Gortler, F., Solbrig, Stefan, Wettig, Tilo, Oefner, Peter J. , Spang, Rainer, Altenbuchinger, Michael, Basso, R. S., Hochbaum, D., Vandin, F., Silverbush, D., Cristea, S., Yanovich, G., Geiger, T., Beerenwinkel, N., Sharan, R., Zhou, Z., Luhmann, N., Alikhan, N. F. and Achtman, M. (2018) Principles of Systems Biology, No. 31. Cell Syst 7 (2), pp. 133-135. Fulltext not available.

Freiin von Schlippenbach, Trixi Kristina (2018) Optimization and Application of Non-Uniform Sampling for 2D NMR-Based Metabolomics. PhD, Universität Regensburg.

Reichold, M., Klootwijk, E. D., Reinders, Jörg , Otto, E. A., Milani, M., Broeker, C., Laing, C., Wiesner, J., Devi, S., Zhou, W., Schmitt, R., Tegtmeier, I., Sterner, C., Doellerer, H., Renner, K., Oefner, Peter J. , Dettmer, Katja , Simbuerger, J., Witzgall, R., Stanescu, H. C., Dumitriu, S., Iancu, D., Patel, V., Mozere, M., Tekman, M., Jaureguiberry, G., Issler, N., Kesselheim, A., Walsh, S. B., Gale, D. P., Howie, A. J., Martins, J. R., Hall, A. M., Kasgharian, M., O'Brien, K., Ferreira, C. R., Atwal, P. S., Jain, M., Hammers, A., Charles-Edwards, G., Choe, C. U., Isbrandt, D., Cebrian-Serrano, A., Davies, B., Sandford, R. N., Pugh, C., Konecki, D. S., Povey, S., Bockenhauer, D., Lichter-Konecki, U., Gahl, W. A., Unwin, R. J., Warth, Richard and Kleta, R. (2018) Glycine Amidinotransferase (GATM), Renal Fanconi Syndrome, and Kidney Failure. J. Am. Soc. Nephrol. 29 (7), pp. 1849-1858. Fulltext not available.

Loftus, R. M., Assmann, N., Kedia-Mehta, N., O'Brien, K. L., Garcia, A., Gillespie, C., Hukelmann, J. L., Oefner, Peter J. , Lamond, A. I., Gardiner, C. M., Dettmer, Katja , Cantrell, D. A., Sinclair, L. V. and Finlay, D. K. (2018) Amino acid-dependent cMyc expression is essential for NK cell metabolic and functional responses in mice. Nat Commun 9 (1), p. 2341.

Feist, M., Schwarzfischer, Philipp, Heinrich, Paul, Sun, Xueni, Kemper, J., von Bonin, F., Perez-Rubio, Paula, Taruttis, Franziska, Rehberg, Thorsten, Dettmer, Katja , Gronwald, Wolfram , Reinders, Jörg , Engelmann, Julia C. , Dudek, J., Klapper, W., Trumper, L., Spang, Rainer, Oefner, Peter J. and Kube, D. (2018) Cooperative STAT/NF-κB signaling regulates lymphoma metabolic reprogramming and aberrant GOT2 expression. Nat Commun 9 (1), p. 1514.

DeFilipp, Z., Peled, J. U., Li, S., Mahabamunuge, J., Dagher, Z., Slingerland, A. E., Del Rio, C., Valles, B., Kempner, M. E., Smith, M., Brown, J., Dey, B. R., El-Jawahri, A., McAfee, S. L., Spitzer, T. R., Ballen, K. K., Sung, A. D., Dalton, T. E., Messina, J. A., Dettmer, Katja, Liebisch, G., Oefner, Peter J., Taur, Y., Pamer, E. G., Holler, E., Mansour, M. K., van den Brink, M. R. M., Hohmann, E., Jenq, R. R. and Chen, Y. B. (2018) Third-party fecal microbiota transplantation following allo-HCT reconstitutes microbiome diversity. Blood Advances 2 (7), pp. 745-753.

Böttcher, Martin , Renner, Kathrin, Berger, Raffaela, Mentz, Kristin, Thomas, Simone , Cardenas-Conejo, Zugey Elizabeth, Dettmer, Katja , Oefner, Peter J. , Mackensen, Andreas, Kreutz, Marina and Mougiakakos, Dimitrios (2018) D-2-hydroxyglutarate interferes with HIF-1α stability skewing T-cell metabolism towards oxidative phosphorylation and impairing Th17 polarization. OncoImmunology 7 (7), e1445454.

Li, Y., Sekula, P., Wuttke, M., Wahrheit, J., Hausknecht, B., Schultheiss, U. T., Gronwald, Wolfram, Schlosser, P., Tucci, S., Ekici, A. B., Spiekerkoetter, U., Kronenberg, F., Eckardt, K. U., Oefner, Peter J. and Kottgen, A. (2018) Genome-Wide Association Studies of Metabolites in Patients with CKD Identify Multiple Loci and Illuminate Tubular Transport Mechanisms. J. Am. Soc. Nephrol.. Fulltext not available.

Schlippenbach, Trixi V. , Oefner, Peter J. and Gronwald, Wolfram (2018) Systematic Evaluation of Non-Uniform Sampling Parameters in the Targeted Analysis of Urine Metabolites by1H,1H 2D NMR Spectroscopy. Scientific Reports 8 (1), p. 4249.

Mycielska, M. E., Dettmer-Wilde, Katja, Rummele, P., Schmidt, K. M., Prehn, C., Milenkovic, V., Jagla, W., Madej, M. G., Lantow, M., Schladt, M. T., Cecil, A., Koehl, G. E., Eggenhofer, E., Wachsmuth, C., Ganapathy, V., Schlitt, H. J., Kunzelmann, K., Ziegler, C., Wetzel, C. H., Gaumann, A., Lang, S. A., Adamski, J., Oefner, Peter J. and Geissler, E. K. (2018) Extracellular citrate affects critical elements of cancer cell metabolism and supports cancer development in vivo. Cancer research. Fulltext not available.

Schwab, A., Siddiqui, A., Vazakidou, M. E., Napoli, F., Bottcher, M., Menchicchi, B., Raza, U., Saatci, O., Krebs, A. M., Ferrazzi, F., Rapa, I., Dettmer-Wilde, Katja, Waldner, M. J., Ekici, A. B., Rasheed, S. A. K., Mougiakakos, D., Oefner, Peter J., ?ahin, O., Volante, M., Greten, F. R., Brabletz, T. and Ceppi, P. (2018) Polyol pathway links glucose metabolism to the aggressiveness of cancer cells. Cancer Res.. Fulltext not available.

2017

Sekula, P. , Dettmer, Katja , Vogl, Franziska C., Gronwald, Wolfram, Ellmann, Lisa, Mohney, R. P., Eckardt, K. U., Suhre, K. , Kastenmuller, G. , Oefner, Peter J. and Kottgen, A. (2017) From Discovery to Translation: Characterization of C-Mannosyltryptophan and Pseudouridine as Markers of Kidney Function. Scientific Reports 7 (1), p. 17400. Fulltext not available.

Assmann, N., O'Brien, K. L., Donnelly, R. P., Dyck, L., Zaiatz-Bittencourt, V., Loftus, R. M., Heinrich, Paul, Oefner, Peter J., Lynch, L., Gardiner, C. M., Dettmer, Katja and Finlay, D. K. (2017) Srebp-controlled glucose metabolism is essential for NK cell functional responses. Nat. Immunol. 18 (11), pp. 1197-1206. Fulltext not available.

Weber, Daniela, Frauenschläger, Katrin, Ghimire, Sakhila, Peter, Katrin, Panzer, Isabella, Hiergeist, Andreas, Weber, Markus, Kutny, Daniel, Wolff, Daniel, Grube, Matthias, Huber, Elisabeth, Oefner, Peter, Gessner, Andre, Hehlgans, Thomas, Herr, Wolfgang and Holler, Ernst (2017) The association between acute graft-versus-host disease and antimicrobial peptide expression in the gastrointestinal tract after allogeneic stem cell transplantation. PLOS ONE 12 (9), e0185265.

Jurczyk, Jan, Rehberg, Thorsten, Eckrot, Alexander and Morgenstern, Ingo (2017) Measuring critical transitions in financial markets. Scientific Reports 7 (1), p. 11564.

Zacharias, Helena, Rehberg, Thorsten, Mehrl, S., Richtmann, D., Wettig, Tilo, Oefner, Peter J., Spang, Rainer, Gronwald, Wolfram and Altenbuchinger, Michael (2017) Scale-Invariant Biomarker Discovery in Urine and Plasma Metabolite Fingerprints. J. Proteome Res.. Fulltext not available.

Altenbuchinger, Michael, Schwarzfischer, Philipp, Rehberg, Thorsten, Reinders, Jörg , Kohler, Christian , Gronwald, Wolfram , Richter, J., Szczepanowski, M., Masqué-Soler, N., Klapper, W., Oefner, Peter J. and Spang, Rainer (2017) Molecular signatures that can be transferred across different omics platforms. Bioinformatics 33 (14), i333-i340. Fulltext not available.

Rohde, M., Bonn, B. R., Zimmermann, M., Lange, J., Moricke, A., Klapper, W., Oschlies, I., Szczepanowski, M., Nagel, I., Schrappe, M., Loeffler, M., Siebert, R., Reiter, A., Burkhardt, B., Altenbuchinger, Michael, Dettmer-Wilde, Katja, Engelmann, Julia C. , Gronwald, Wolfram , Oefner, Peter J. , Schwarzfischer, Philipp, Taruttis, Franziska and Spang, Rainer (2017) Relevance of ID3-TCF3-CCND3 pathway mutations in pediatric aggressive B-cell lymphoma treated according to the non-Hodgkin Lymphoma Berlin-Frankfurt-Münster protocols. Haematologica 102 (6), pp. 1091-1098. Fulltext not available.

Schlecht, I., Gronwald, Wolfram, Behrens, G. , Baumeister, S. E., Hertel, J., Hochrein, J., Zacharias, Helena, Fischer, B., Oefner, Peter J. and Leitzmann, M. F. (2017) Visceral adipose tissue but not subcutaneous adipose tissue is associated with urine and serum metabolites. PLoS ONE 12 (4), e0175133.

Wallmeier, Jens, Samol, Claudia, Ellmann, Lisa, Zacharias, Helena, Vogl, Franziska C., Garcia, Muriel, Dettmer, Katja , Oefner, Peter J. and Gronwald, Wolfram (2017) Quantification of metabolites by NMR spectroscopy in the presence of protein. Journal of Proteome Research 1535-3893. Fulltext not available.

Feist, M., Kemper, J., Taruttis, Franziska, Rehberg, Thorsten, Engelmann, Julia C. , Gronwald, Wolfram, Hummel, Michael, Spang, Rainer and Kube, Dieter (2017) Synergy of interleukin 10 and toll-like receptor 9 signalling in B cell proliferation: Implications for lymphoma pathogenesis. International Journal of Cancer: Int. J. Cancer. Fulltext not available.

Maliniemi, P. , Laukkanen, K., Vakeva, L., Dettmer, Katja , Lipsanen, T., Jeskanen, L., Bessede, A., Oefner, Peter J., Kadin, M. E. and Ranki, A. (2017) Biological and clinical significance of tryptophan-catabolizing enzymes in cutaneous T-cell lymphomas. Oncoimmunology 6 (3), e1273310. Fulltext not available.

Schwarzfischer, Philipp, Reinders, Jörg, Dettmer, Katja , Kleo, K., Dimitrova, L., Hummel, M., Feist, M., Kube, D., Szczepanowski, M., Klapper, W., Taruttis, Franziska, Engelmann, Julia C. , Spang, Rainer, Gronwald, Wolfram and Oefner, Peter J. (2017) Comprehensive metaboproteomics of Burkitt's and diffuse large B-cell lymphoma cell lines and primary tumor tissues reveals distinct differences in pyruvate content and metabolism. Journal of Proteome Research 16, pp. 1105-1120. Fulltext not available.

Taruttis, Franziska, Feist, M., Schwarzfischer, Philipp, Gronwald, Wolfram, Kube, D., Spang, Rainer and Engelmann, Julia C. (2017) External calibration with Drosophila whole-cell spike-ins delivers absolute mRNA fold changes from human RNA-Seq and qPCR data. BioTechniques 62 (2), pp. 53-61. Fulltext not available.

Grois, Laura, Hupf, Julian, Reinders, Jörg, Schröder, Josef, Dietl, Alexander, Schmid, Peter M., Jungbauer, Carsten, Resch, Markus, Maier, Lars S., Luchner, Andreas and Birner, Christoph (2017) Combined Inhibition of the Renin-Angiotensin System and Neprilysin Positively Influences Complex Mitochondrial Adaptations in Progressive Experimental Heart Failure. PLoS ONE 12 (1), e0169743.

Mahalingam, Ramamurthy , Safronov, Omid, Kreuzwieser, Jürgen, Haberer, Georg, Alyousif, Mohamed S., Schulze, Waltraud, Al-Harbi, Naif, Arab, Leila , Ache, Peter, Stempfl, Thomas, Kruse, Joerg , Mayer, Klaus X. , Hedrich, Rainer, Rennenberg, Heinz , Salojärvi, Jarkko and Kangasjärvi, Jaakko (2017) Detecting early signs of heat and drought stress in Phoenix dactylifera (date palm). PLOS ONE 12 (6), e0177883. Fulltext not available.

Maier, Anja, Wu, Hao, Cordasic, Nada, Oefner, Peter, Dietel, Barbara, Thiele, Christoph, Weidemann, Alexander, Eckardt, Kai-Uwe and Warnecke, Christina (2017) Hypoxia-inducible protein 2 Hig2/Hilpda mediates neutral lipid accumulation in macrophages and contributes to atherosclerosis in apolipoprotein E–deficient mice. The FASEB Journal 31 (11), pp. 4971-4984. Fulltext not available.

Weber, Daniela, Jenq, Robert R., Peled, Jonathan U. , Taur, Ying, Hiergeist, Andreas , Koestler, Josef, Dettmer, Katja , Weber, Markus, Wolff, Daniel, Hahn, Joachim, Pamer, Eric G., Herr, Wolfgang, Gessner, André, Oefner, Peter J., van den Brink, Marcel R.M. and Holler, Ernst (2017) Microbiota Disruption Induced by Early Use of Broad-Spectrum Antibiotics Is an Independent Risk Factor of Outcome after Allogeneic Stem Cell Transplantation. Biology of Blood and Marrow Transplantation 23 (5), pp. 845-852. Fulltext not available.

Bosserhoff, Anja Katrin , Schneider, Nadja, Ellmann, Lisa, Heinzerling, Lucie and Kuphal, Silke (2017) The neurotrophin Neuritin1 (cpg15) is involved in melanoma migration, attachment independent growth, and vascular mimicry. Oncotarget 8 (1). Fulltext not available.

2016

Roider, Tobias, Katzfuss, Michael, Matos, Carina, Singer, Katrin, Renner, Kathrin, Oefner, Peter , Dettmer-Wilde, Katja, Herr, Wolfgang, Holler, Ernst, Kreutz, Marina and Peter, Katrin (2016) Antithymocyte Globulin Induces a Tolerogenic Phenotype in Human Dendritic Cells. International Journal of Molecular Sciences 17, p. 2081.

Brand, A., Singer, K., Koehl, G. E., Kolitzus, M., Schoenhammer, G., Thiel, A., Matos, C., Bruss, C., Klobuch, S., Peter, K., Kastenberger, M., Bogdan, C., Schleicher, U., Mackensen, Andreas, Ullrich, E., Fichtner-Feigl, S., Kesselring, R., Mack, M., Ritter, U., Schmid, M., Blank, C., Dettmer, Katja , Oefner, Peter J. , Hoffmann, P., Walenta, S., Geissler, E. K., Pouyssegur, J., Villunger, A., Steven, A., Seliger, B., Schreml, S., Haferkamp, S., Kohl, E., Karrer, S., Berneburg, Mark , Herr, Wolfgang, Mueller-Klieser, W., Renner, K. and Kreutz, Marina (2016) LDHA-Associated Lactic Acid Production Blunts Tumor Immunosurveillance by T and NK Cells. Cell Metabolism (Cell Metab.) 24 (5), pp. 657-671. Fulltext not available.

Vogl, Franziska C., Mehrl, S., Heizinger, L., Schlecht, I., Zacharias, Helena, Ellmann, L., Nürnberger, N., Gronwald, Wolfram, Leitzmann, M. F., Rossert, J., Eckardt, K. U., Dettmer, Katja and Oefner, Peter J. (2016) Evaluation of dilution and normalization strategies to correct for urinary output in HPLC-HRTOFMS metabolomics. Analytical and Bioanalytical Chemistry (Anal Bioanal Chem). Fulltext not available.

Altenbuchinger, Michael, Rehberg, Thorsten, Zacharias, Helena, Stämmler, Frank, Dettmer, Katja , Weber, Daniela, Hiergeist, Andreas, Gessner, Andre, Holler, Ernst, Oefner, Peter J. and Spang, Rainer (2016) Reference point insensitive molecular data analysis. Bioinformatics.

Limm, K., Dettmer, Katja , Reinders, Jörg , Oefner, Peter J. and Bosserhoff, A. K. (2016) Characterization of the Methylthioadenosine Phosphorylase Polymorphism rs7023954 - Incidence and Effects on Enzymatic Function in Malignant Melanoma. PLoS ONE 11 (8), e0160348.

Zacharias, Helena U. (2016) Identification of novel biomarkers for predicting outcome of acute and chronic kidney disease. PhD, Universität Regensburg.

Stämmler, Frank, Glasner, J., Hiergeist, Andreas , Holler, Ernst, Weber, Daniela, Oefner, Peter J. , Gessner, Andre and Spang, Rainer (2016) Adjusting microbiome profiles for differences in microbial load by spike-in bacteria. Microbiome 4 (1), p. 28.

Seliger, Corinna, Meyer, A. L., Renner, K., Leidgens, V., Moeckel, S., Jachnik, B., Dettmer, Katja, Tischler, U., Gerthofer, V., Rauer, L., Uhl, M., Proescholdt, M., Bogdahn, U., Riemenschneider, M. J., Oefner, Peter J., Kreutz, M., Vollmann-Zwerenz, A. and Hau, Peter (2016) Metformin inhibits proliferation and migration of glioblastoma cells independently of TGF-β2. Cell Cycle 15 (13), pp. 1755-1766. Fulltext not available.

Assmann, Nadine, Dettmer, Katja, Simbürger, Johann, Broeker, Carsten, Nuernberger, Nadine, Renner, Kathrin, Courtneidge, H., Klootwijk, E. D., Duerkop, Axel, Hall, A., Kleta, R., Oefner, Peter J., Reichold, Markus and Reinders, Jörg (2016) Renal Fanconi Syndrome Is Caused by a Mistargeting-Based Mitochondriopathy. Cell Reports (Cell Rep) 15 (7), pp. 1423-1429.

Simburger, J. M., Dettmer, Katja, Oefner, Peter J. and Reinders, Jörg (2016) Optimizing the SWATH-MS-workflow for label-free proteomics. J Proteomics. Fulltext not available.

Weber, Daniela, Oefner, Peter J., Dettmer, Katja, Hiergeist, Andreas, Koestler, Josef, Gessner, Andre, Weber, Markus, Stämmler, Frank, Hahn, Joachim, Wolff, Daniel, Herr, Wolfgang and Holler, Ernst (2016) Rifaximin preserves intestinal microbiota balance in patients undergoing allogeneic stem cell transplantation. Bone Marrow Transplant.. Fulltext not available.

Voelxen, N. F., Walenta, S., Proescholdt, Martin A., Dettmer, Katja, Pusch, S. and Mueller-Klieser, W. (2016) Quantitative Imaging of D-2-Hydroxyglutarate in Selected Histological Tissue Areas by a Novel Bioluminescence Technique. Frontiers in Oncology 6, p. 46.

Waldhier, Magdalena C. (2016) Towards Chiralomics: Targeted and Untargeted Gas Chromatography-Mass Spectrometry based Enantioselective Metabolome Analysis. PhD, Universität Regensburg.

Henrich, F., Singer, Katrin, Poller, K., Bernhardt, L., Strobl, C., Ritter, Axel P., Gottfried, E., Peter, Katrin, Dettmer, Katja, Oefner, Peter J., Bosserhoff, Anja-Katrin and Kreutz, Marina (2016) Suppressive effects of tumor cell-derived 5′-deoxy-5′-methylthioadenosine on human T cells. OncoImmunology 5, e1184802. Fulltext not available.

Reinders, Y., Völler, D., Bosserhoff, Anja-Katrin, Oefner, Peter and Reinders, Jörg (2016) Testing Suitability of Cell Cultures for SILAC-Experiments Using SWATH-Mass Spectrometry. Methods Mol Biol 1394, pp. 101-108. Fulltext not available.

2015

Jantsch, Johnathan, Schatz, Valentin, Dettmer, Katja, Dick, Chritstopher, Ehrenschwender, Martin, Hellerbrand, Claus and Oefner, Peter J. (2015) Ferritin-Mediated Iron Sequestration Stabilizes Hypoxia-Inducible Factor-1α upon LPS Activation in the Presence of Ample Oxygen. Cell Reports 2015 (13), pp. 2048-2055.

Raschenberger, J., Kollerits, B., Titze, S., Kottgen, A., Barthlein, B., Ekici, A. B., Forer, L., Schonherr, S., Weissensteiner, H., Haun, M., Wanner, C., Eckardt, K. U., Kronenberg, F., Eckardt, K. U., Titze, S., Meiselbach, H., Schneider, M., Dienemann, T., Prokosch, H. U., Barthlein, B., Reis, A., Ekici, A. B., Gefeller, O., Hilgers, K. F., Hubner, S., Avendano, S., Becker-Grosspitsch, D., Hausknecht, B., Zitzmann, R., Weigel, A., Beck, A., Ganslandt, T., Knispel, S., Dressel, T., Kottgen, A., Schultheiss, U., Meder, S., Mitsch, E., Reinhard, U., Walz, G., Floege, J., Schlieper, G., Saritas, T., Ernst, S., Lipski, S., Schaeffner, E., Baid-Agrawal, S., Petzold, K., Kielstein, J. T., Haller, H., Lorenzen, J., Otto, P., Sommerer, C., Follinger, C., Zeier, M., Busch, M., Wolf, G., Paul, K., Dittrich, L., Fuss, R., Hilge, R., Sitter, T., Blank, C., Wanner, C., Krane, V., Toncar, S., Schmiedeke, D., Cavitt, D., Schonowsky, K., Borner-Klein, A., Kronenberg, F., Raschenberger, J., Kollerits, B., Forer, L., Schonherr, S., Weissensteiner, H., Oefner, Peter J., Gronwald, Wolfram, Zacharias, Helena, Schmid, M. and Nadal, J. (2015) Do telomeres have a higher plasticity than thought? Results from the German Chronic Kidney Disease (GCKD) study as a high-risk population. Exp. Gerontol. 72 (162), pp. 162-166. Fulltext not available.

Clara, Renan Orsati, Assmann, Nadine, Ramos Moreno, Ana Carolina, Coimbra, Janine Baptista, Nurenberger, Nadine, Dettmer-Wilde, Katja, Oefner, Peter and Campa, Ana (2015) Melanocytes are more responsive to IFN-γ and produce higher amounts of kynurenine than melanoma cells. Biological Chemistry )Biol Chem. (In Press) Fulltext not available.

Wachsmuth, Christian J. (2015) Implementation and applications of gas chromatography/ atmospheric pressure chemical ionization time-of-flight mass spectrometry in metabolomics. PhD, Universität Regensburg.

Sekula, Peggy, Goek, Oemer-Necmi, Quaye, Lydia, Barrios, Clara, Levey, Andrew S., Römisch-Margl, Werner, Menni, Cristina, Yet, Idil, Gieger, Christian, Inker, Lesley A., Adamski, Jerzy, Gronwald, Wolfram, Illig, Thomas, Dettmer, Katja, Krumsiek, Jan, Oefner, Peter J., Valdes, Ana M., Meisinger, Christa, Coresh, Josef, Spector, Tim D., Mohney, Robert P., Suhre, Karsten, Kastenmüller, Gabi and Köttgen, Anna (2015) A Metabolome-Wide Association Study of Kidney Function and Disease in the General Population. Journal of the American Society of Nephrology (JASN) 27 (4), pp. 1175-1188.

Raschenberger, J., Kollerits, B., Titze, S., Kottgen, A., Barthlein, B., Ekici, A. B., Forer, L., Schonherr, S., Weissensteiner, H., Haun, M., Wanner, C., Eckardt, K. U., Kronenberg, F., Eckardt, K. U., Titze, S., Meiselbach, H., Schneider, M., Dienemann, T., Prokosch, H. U., Barthlein, B., Reis, A., Ekici, A. B., Gefeller, O., Hilgers, K. F., Hubner, S., Avendano, S., Becker-Grosspitsch, D., Hausknecht, B., Zitzmann, R., Weigel, A., Beck, A., Ganslandt, T., Knispel, S., Dressel, T., Kottgen, A., Schulthei?, U., Meder, S., Mitsch, E., Reinhard, U., Walz, G., Floege, J., Schlieper, G., Saritas, T., Ernst, S., Lipski, S., Schaeffner, E., Baid-Agrawal, S., Petzold, K., Kielstein, J. T., Haller, H., Lorenzen, J., Otto, P., Sommerer, C., Follinger, C., Zeier, M., Busch, M., Wolf, G., Paul, K., Dittrich, L., Fu?, R., Hilge, R., Sitter, T., Blank, C., Wanner, C., Krane, V., Toncar, S., Schmiedeke, D., Cavitt, D., Schonowsky, K., Borner-Klein, A., Kronenberg, F., Raschenberger, J., Kollerits, B., Forer, L., Schonherr, S., Weissensteiner, H., Oefner, Peter J., Gronwald, Wolfram, Zacharias, Helena, Schmid, M. and Nadal, J. (2015) Association of relative telomere length with cardiovascular disease in a large chronic kidney disease cohort: the GCKD study. Atherosclerosis 242 (2), pp. 529-534. Fulltext not available.

Aßmann, Nadine (2015) Impact of Fanconi-associated protein on the mitochondrial proteome. PhD, Universität Regensburg.

Hochrein, Jochen, Zacharias, Helena, Taruttis, Franziska, Samol, Claudia, Engelmann, Julia C., Spang, Rainer, Oefner, Peter J. and Gronwald, Wolfram (2015) Data Normalization of (1)H NMR Metabolite Fingerprinting Data Sets in the Presence of Unbalanced Metabolite Regulation. J. Proteome Res. 14 (8), pp. 3217-3228. Fulltext not available.

Renner, Kathrin, Geiselhöringer, Anna-Lena, Fante, Matthias, Bruss, Christina, Färber, Stephanie, Schönhammer, Gabriele, Peter, Katrin, Singer, Katrin, Andreesen, Reinhard, Hoffmann, Petra, Oefner, Peter J., Herr, Wolfgang and Kreutz, Marina (2015) Metabolic plasticity of human T cells: Preserved cytokine production under glucose deprivation or mitochondrial restriction, but 2-deoxy-glucose affects effector functions. Eur J Immunol 45 (9), pp. 2504-2516. Fulltext not available.

Zacharias, Helena, Hochrein, Jochen, Vogl, Franziska C., Schley, G., Mayer, F., Jeleazcov, C., Eckardt, K. U., Willam, C., Oefner, Peter J. and Gronwald, Wolfram (2015) Identification of Plasma Metabolites Prognostic of Acute Kidney Injury after Cardiac Surgery with Cardiopulmonary Bypass. J. Proteome Res. 14 (7), pp. 2897-2905. Fulltext not available.

Wachsmuth, Christian J., Hahn, Thomas A., Oefner, Peter J. and Dettmer, Katja (2015) Enhanced metabolite profiling using a redesigned atmospheric pressure chemical ionization source for gas chromatography coupled to high-resolution time-of-flight mass spectrometry. Anal Bioanal Chem (Analytical and Bioanalytical Chemistry) 407 (22), pp. 6669-6680. Fulltext not available.

von Bahr, L., Blennow, O., Alm, J., Bjorklund, A., Malmberg, K. J., Mougiakakos, D., Le Blanc, A., Oefner, Peter J., Labopin, M., Ljungman, P. and Le Blanc, K. (2015) Increased incidence of chronic GvHD and CMV disease in patients with vitamin D deficiency before allogeneic stem cell transplantation. Bone Marrow Transplant. 50 (9), pp. 1217-1223. Fulltext not available.

von Bahr, L., Blennow, O., Alm, J., Bjorklund, A., Malmberg, K.-J., Mougiakakos, D., Le Blanc, A., Oefner, Peter J., Labopin, M., Ljungman, P. and Le Blanc, K. (2015) Increased incidence of chronic GvHD and CMV disease in patients with vitamin D deficiency before allogeneic stem cell transplantation. Bone Marrow Transplant 50 (9), pp. 1217-1223. Fulltext not available.

Wolferstetter, Stefanie, Reinders, Jörg, Schwede, Frank, Ruth, Peter, Schinner, Elisabeth and Schlossmann, Jens (2015) Interaction of cCMP with the cGK, cAK and MAPK Kinases in Murine Tissues. PLoS ONE 10 (5), e0126057.

Beck, H., Titze, S. I., Hubner, S., Busch, M., Schlieper, G., Schultheiss, U. T., Wanner, C., Kronenberg, F., Krane, V., Eckardt, K. U., Kottgen, A., Eckardt, K. U., Titze, S., Prokosch, H. U., Barthlein, B., Reis, A., Ekici, A. B., Gefeller, O., Hilgers, K. F., Hubner, S., Avendano, S., Becker-Grosspitsch, D., Hauck, N., Seuchter, S. A., Hausknecht, B., Rittmeier, M., Weigel, A., Beck, A., Ganslandt, T., Knispel, S., Dressel, T., Malzer, M., Floege, J., Eitner, F., Schlieper, G., Findeisen, K., Arweiler, E., Ernst, S., Unger, M., Lipski, S., Schaeffner, E., Baid-Agrawal, S., Petzold, K., Schindler, R., Kottgen, A., Schultheiss, U., Meder, S., Mitsch, E., Reinhard, U., Walz, G., Haller, H., Lorenzen, J., Kielstein, J. T., Otto, P., Sommerer, C., Follinger, C., Zeier, M., Wolf, G., Busch, M., Paul, K., Dittrich, L., Sitter, T., Hilge, R., Blank, C., Wanner, C., Krane, V., Schmiedeke, D., Toncar, S., Cavitt, D., Schonowsky, K., Borner-Klein, A., Kronenberg, F., Raschenberger, J., Kollerits, B., Forer, L., Schonherr, S., Weissensteiner, H., Oefner, Peter J., Gronwald, Wolfram, Zacharias, Helena and Schmid, M. (2015) Heart failure in a cohort of patients with chronic kidney disease: the GCKD study. PLoS ONE 10 (4).

Tetens, J., Heuer, C., Heyer, I., Klein, Matthias S., Gronwald, Wolfram, Junge, W., Oefner, Peter J., Thaller, G. and Krattenmacher, N. (2015) Polymorphisms within the APOBR gene are highly associated with milk levels of prognostic ketosis biomarkers in dairy cows. Physiol. Genomics 47 (4), pp. 129-137. Fulltext not available.

Jing, J., Kielstein, J. T., Schultheiss, U. T., Sitter, T., Titze, S. I., Schaeffner, E. S., McAdams-DeMarco, M., Kronenberg, F., Eckardt, K. U., Kottgen, A., Eckardt, K. U., Titze, S., Prokosch, H. U., Barthlein, B., Reis, A., Ekici, A. B., Gefeller, O., Hilgers, K. F., Hubner, S., Avendano, S., Becker-Grosspitsch, D., Hauck, N., Seuchter, S. A., Hausknecht, B., Rittmeier, M., Weigel, A., Beck, A., Ganslandt, T., Knispel, S., Dressel, T., Malzer, M., Floege, J., Eitner, F., Schlieper, G., Findeisen, K., Arweiler, E., Ernst, S., Unger, M., Lipski, S., Schaeffner, E., Baid-Agrawal, S., Petzold, K., Schindler, R., Kottgen, A., Schultheiss, U., Meder, S., Mitsch, E., Reinhard, U., Walz, G., Haller, H., Lorenzen, J., Kielstein, J. T., Otto, P., Sommerer, C., Follinger, C., Zeier, M., Wolf, G., Busch, M., Paul, K., Dittrich, L., Sitter, T., Hilge, R., Blank, C., Wanner, C., Krane, V., Schmiedeke, D., Toncar, S., Cavitt, D., Schonowsky, K., Borner-Klein, A., Kronenberg, F., Raschenberger, J., Kollerits, B., Forer, L., Schonherr, S., Weissensteiner, H., Oefner, Peter J., Gronwald, Wolfram, Zacharias, Helena and Schmid, M. (2015) Prevalence and correlates of gout in a large cohort of patients with chronic kidney disease: the German Chronic Kidney Disease (GCKD) study. Nephrol. Dial. Transplant. 30 (4), pp. 613-621. Fulltext not available.

Engelmann, Julia C., Amann, Thomas, Ott-Rötzer, Brigitta, Nützel, Magit, Reinders, Yvonne, Reinders, Jörg, Thasler, Wolfgang E., Kristl, Theresa, Teufel, Andreas, Huber, Christian G., Oefner, Peter J., Spang, Rainer and Hellerbrand, Claus (2015) Causal Modeling of Cancer-Stromal Communication Identifies PAPPA as a Novel Stroma-Secreted Factor Activating NFκB Signaling in Hepatocellular Carcinoma. PLoS Computational Biology 11 (5), pp. 1-22.

Leisz, Sandra, Schulz, Kristin, Erb, Susanne, Oefner, Peter J., Dettmer, Katja, Mougiakakos, Dimitrios, Wang, Ena, Marincola, Francesco M., Stehle, Franziska and Seliger, Barbara (2015) Distinct von Hippel-Lindau gene and hypoxia-regulated alterations in gene and protein expression patterns of renal cell carcinoma and their effects on metabolism. Oncotarget 6 (13), pp. 11395-11406.

Titze, S., Schmid, M., Kottgen, A., Busch, M., Floege, J., Wanner, C., Kronenberg, F., Eckardt, K. U., Eckardt, K. U., Titze, S., Prokosch, H. U., Barthlein, B., Beck, A., Ganslandt, T., Gefeller, O., Schmid, M., Koster, J., Malzer, M., Schlieper, G., Eitner, F., Meisen, S., Kehl, K., Arweiler, E., Floege, J., Schaeffner, E., Baid-Agrawal, S., Schindler, R., Titze, S., Hubner, S., Dienemann, T., Hilgers, K. F., Eckardt, K. U., Kottgen, A., Schultheiss, U., Walz, G., Kielstein, J. T., Lorenzen, J., Haller, H., Sommerer, C., Zeier, M., Busch, M., Paul, K., Wolf, G., Hilge, R., Sitter, T., Krane, V., Schmiedeke, D., Toncar, S., Wanner, C., Ekici, A. B., Reis, A., Forer, L., Schonherr, S., Weissensteiner, H., Kollertits, B., Raschenberger, J., Kronenberg, F., Gronwald, Wolfram, Zacharias, Helena and Oefner, Peter J. (2015) Disease burden and risk profile in referred patients with moderate chronic kidney disease: composition of the German Chronic Kidney Disease (GCKD) cohort. Nephrol. Dial. Transplant. 30 (3), pp. 441-451. Fulltext not available.

Sporrer, Daniela, Gessner, Andre, Hehlgans, Thomas, Oefner, Peter J. and Holler, Ernst (2015) The Microbiome and Allogeneic Stem Cell Transplantation. Current Stem Cell Rep 1 (1), pp. 53-59. Fulltext not available.

Sporrer, Daniela, Gessner, Andre, Hehlgans, Thomas, Oefner, Peter J. and Holler, Ernst (2015) The Microbiome and Allogeneic Stem Cell Transplantation. Current Stem Cell Reports 1, pp. 53-59. Fulltext not available.

Ehret, A., Hochstuhl, D., Krattenmacher, N., Tetens, J., Klein, M. S., Gronwald, Wolfram and Thaller, G. (2015) Short communication: Use of genomic and metabolic information as well as milk performance records for prediction of subclinical ketosis risk via artificial neural networks. Journal of dairy science 98 (1), pp. 322-329. Fulltext not available.

Weber, Daniela, Oefner, Peter J., Hiergeist, Andreas, Koestler, Josef, Gessner, Andre, Weber, Markus, Hahn, Joachim, Wolff, Daniel, Stämmler, Frank, Spang, Rainer, Herr, Wolfgang, Dettmer, Katja and Holler, Ernst (2015) Low urinary indoxyl sulfate levels early after transplantation reflect a disrupted microbiome and are associated with poor outcome. Blood 126 (14), pp. 1723-1728.

2014

Fuessl, Marion, Reinders, Jörg, Oefner, Peter J., Heinze, Jürgen and Schrempf, Alexandra (2014) Selenophosphate-synthetase in the male accessory glands of an insect without selenoproteins. Journal of insect physiology 71, pp. 46-51. Fulltext not available.

Wachsmuth, Christian J., Dettmer, Katja, Lang, S. A., Mycielska, M. E. and Oefner, Peter J. (2014) Continuous water infusion enhances atmospheric pressure chemical ionization of methyl chloroformate derivatives in gas chromatography coupled to time-of-flight mass spectrometry-based metabolomics. Anal. Chem. 86 (18), pp. 9186-9195. Fulltext not available.

Oefner, Peter J. (2014) What Identity Crisis? Rapidly Mutating Y-STRs Facilitate Differentiation of Males. Human mutation 35 (8), v. Fulltext not available.

Dettmer, Katja (2014) Assessment of ionic liquid stationary phases for the GC analysis of fatty acid methyl esters. Analytical and Bioanalytical Chemistry 406, pp. 4931-4939. Fulltext not available.

Pauly, Diana, Nagel, Benedik M., Reinders, Jörg , Kilian, Tobias, Wulf, Matthias, Ackermann, Susanne, Ehrenstein, Boris, Zipfel, Peter F., Skerka, Christine and Weber, Bernhard H. F. (2014) A Novel Antibody against Human Properdin Inhibits the Alternative Complement System and Specifically Detects Properdin from Blood Samples. PLos ONE 9 (5), e96371.

Jitschin, Regina, Braun, Martina, Büttner, Maike, Dettmer, Katja, Bricks, Juliane, Berger, Jana, Eckart, Michael J., Krause, Stefan W, Oefner, Peter, Le Blanc, Katarina, Mackensen, Andreas and Mougiakakos, Dimitrios (2014) CLL-cells induce IDOhi CD14+HLA-DRlo myeloid derived suppressor cells that inhibit T-cell responses and promote TRegs. Blood. Fulltext not available.

Holler, Ernst, Butzhammer, Peter, Schmid, Karin, Hundsrucker, Christian, Koestler, Josef, Peter, Katrin, Zhu, Wentao, Sporrer, Daniela, Hehlgans, Thomas, Kreutz, Marina, Holler, Barbara, Wolff, Daniel, Edinger, Matthias, Andreesen, Reinhard, Levine, John E., Ferrara, James L, Gessner, Andre, Spang, Rainer and Oefner, Peter J. (2014) Metagenomic analysis of the stool microbiome in patients receiving allogeneic SCT: Loss of diversity is associated with use of systemic antibiotics and more pronounced in gastrointestinal GvHD. Biology of Blood and Marrow Transplantation 20 (5), pp. 640-645. Fulltext not available.

Valletta, Daniela, Czech, Barbara, Spruss, Thilo, Ikenberg, Kristian, Wild, Peter J., Hartmann, Arndt, Weiss, Thomas S., Oefner, Peter J., Müller, Martina, Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2014) Regulation and function of the atypical cadherin FAT1 in hepatocellular carcinoma. Carcinogenesis 35, pp. 1407-1415. Fulltext not available.

Ruedel, Anke, Stark, Klaus, Kaufmann, Simone, Bauer, Richard, Reinders, Jörg, Rovensky, Jozef, Blazicková, Stanislava, Oefner, Peter J. and Bosserhoff, Anja Katrin (2014) N-cadherin promoter polymorphisms and risk of osteoarthritis. FASEB journal 28 (2), pp. 683-691.

Bedal, Konstanze B., Grässel, Susanne, Oefner, Peter J., Reinders, Jörg, Reichert, Torsten E. and Bauer, Richard (2014) Collagen XVI induces expression of MMP9 via modulation of AP-1 transcription factors and facilitates invasion of oral squamous cell carcinoma. Plos One 9 (1), e86777.

Klootwijk, Enriko D., Reichold, Markus, Helip-Wooley, Amanda, Tolaymat, Asad, Broeker, Carsten, Robinette, Steven, Reinders, Jörg, Peindl, Dominika Elisabeth, Renner, Kathrin, Eberhart, Karin, Aßmann, Nadine, Oefner, Peter J., Dettmer, Katja, Sterner, Christina, Schroeder, Josef, Zorger, Niels, Witzgall, Ralph, Reinhold, Stephan W., Stanescu, Horia C., Bockenhauer, Detlef, Jaureguiberry, Gracian, Courtneidge, Holly, Hall, Andrew M., Wijeyesekera, Anisha, Holmes, Elaine, Nicholson, Jeremy K., O´Brien, Kevin, Bernardini, Isa, Krasnewich, Donna M., Arcos-Burgos, Mauricio, Izumi, Yuichiro, Nonoguchi, Hiroshi, Jia, Yuzhi, Reddy, Janardan K., Ilya, Mohammad, Unwin, Robert J., Gahl, William A., Warth, Richard and Kleta, Robert (2014) Mistargeting of Peroxisomal EHHADH and Inherited Renal Fanconi's Syndrome. The New England Journal of Medicine 370, pp. 129-138. Fulltext not available.

Mycielska, Maria, Wachsmuth, Christian J., Dettmer, Katja, Wagner, Christine, Oefner, Peter J., Geissler, Edward K. and Lang, Sven A. (2014) Hsp90 Inhibition Affects Cell Metabolism by Disrupting Mitochondrial Protein Insertion. HSOA Journal of Cell Biology and Cell Metabolism 1, 002.

2013

Paul, Katharina, Kretzschmar, Daniel, Yilmaz, Atilla, Bärthlein, Barbara, Titze, Stephanie, Wolf, Gunter and Busch, Martin (2013) Circulating dendritic cell precursors in chronic kidney disease: a cross-sectional study. BMC nephrology 14, p. 274.

Czech, Barbara, Dettmer, Katja, Valletta, Daniela, Saugspier, Michael Sebastian, Koch, Andreas, Stevens, Axel Peter, Thasler, Wolfgang E., Müller, Martina, Oefner, Peter J., Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2013) Expression and function of methylthioadenosine phosphorylase in chronic liver disease. PloS ONE 8 (12), e80703.

Klein, Matthias S., Almstetter, Martin F., Nürnberger, Nadine, Sigl, Gregor, Gronwald, Wolfram, Wiedemann, Steffi, Dettmer, Katja and Oefner, Peter J. (2013) Correlations between milk and plasma levels of amino and carboxylic acids in dairy cows. Journal of Proteome Research 12 (11), pp. 5223-5232.

Riechers, A., Schmidt, J., Dettmer, Katja, Oefner, Peter J., Jachimczak, P., Schneider, A. and Bosserhoff, Anja-Katrin (2013) Inducing anti-tumor cytokines and an immune response in melanoma by inhibition of MIA using the peptide AR71. Eur J Dermatol 23 (6), pp. 820-825. Fulltext not available.

Burghardt, Tillmann, Kastner, Jürgen, Suleiman, Hani, Rivera-Milla, Eric, Stepanova, Natalya, Lottaz, Claudio, Kubitza, Marion, Böger, Carsten A., Schmidt, Sarah, Gorski, Mathias, de Vries, Uwe, Schmidt, Helga, Hertting, Irmgard, Kopp, Jeffrey, Rascle, Anne, Moser, Markus, Heid, Iris M., Warth, Richard, Spang, Rainer, Wegener, Joachim, Mierke, Claudia T., Englert, Christoph and Witzgall, Ralph (2013) LMX1B is essential for the maintenance of differentiated podocytes in adult kidneys. Journal of the American Society of Nephrology : JASN 24 (11), pp. 1830-1848. Fulltext not available.

Völler, D., Reinders, Jörg, Meister, Gunter and Bosserhoff, Anja-Katrin (2013) Strong reduction of AGO2 expression in melanoma and cellular consequences. British Journal of Cancer 109, pp. 3116-3124. Fulltext not available.

Tea, Muy-Kheng M., Kroiss, Regina, Muhr, Daniela, Fuerhauser-Rappaport, Christine, Oefner, Peter J., Wagner, Teresa M and Singer, Christian F. (2013) Central European BRCA2 mutation carriers: Birth cohort status correlates with onset of breast cancer. Maturitas. Fulltext not available.

Dettmer, Katja, Vogl, Franziska C., Ritter, Axel P., Zhu, Wentao, Nürnberger, Nadine, Kreutz, Marina, Oefner, Peter J., Gronwald, Wolfram and Gottfried, Eva (2013) Distinct metabolic differences between various human cancer and primary cells. ELECTROPHORESIS 34 (19), pp. 2836-2847. Fulltext not available.

Zacharias, Helena, Hochrein, Jochen, Klein, Matthias S., Samol, Claudia, Oefner, Peter J. and Gronwald, Wolfram (2013) Current Experimental, Bioinformatic and Statistical Methods used in NMR Based Metabolomics. Current Metabolomics 1 (3), pp. 253-268. Fulltext not available.

Kreutz, Marina, Gottfried, Eva, Lang, Sven A., Renner, Kathrin, Bosserhoff, Anja-Katrin, Gronwald, Wolfram, Rehli, Michael, Einhell, Sabine, Gedig, Isabell, Singer, Katrin, Seilbeck, Anton, Mackensen, Andreas, Grauer, Oliver, Hau, Peter, Dettmer, Katja, Andreesen, Reinhard and Oefner, Peter (2013) New aspects of an old drug: Diclofenac targets MYC and glucose metabolism in tumor cells. PLoS ONE 8 (7), e66987.

Zacharias, Helena, Schley, Gunnar, Hochrein, Jochen, Klein, Matthias S., Köberle, Carmen, Eckardt, Kai-Uwe, Willam, Carsten, Oefner, Peter J. and Gronwald, Wolfram (2013) Analysis of human urine reveals metabolic changes related to the development of acute kidney injury following cardiac surgery. Metabolomics 9 (3), pp. 697-707. Fulltext not available.

Bauer, Karin, Gosau, Martin, Reinders, Jörg, Oefner, Peter J., Reichert, Torsten E. and Bauer, Richard (2013) Presenilin1/gamma-secretase modulates P-cadherin processing and influences cell adhesion in oral squamous cell carcinoma cell lines. Carcinogenesis 34, pp. 2622-2628. Fulltext not available.

Klein, Matthias S., Oefner, Peter J. and Gronwald, Wolfram (2013) MetaboQuant: a tool combining individual peak calibration and outlier detection for accurate metabolite quantification in 1D (1)H and (1)H-(13)C HSQC NMR spectra. BioTechniques 54 (5), pp. 251-256. Fulltext not available.

Limm, Katharina, Ott, Corinna, Wallner, Susanne, Mueller, Daniel W., Oefner, Peter J., Hellerbrand, Claus and Bosserhoff, Anja-Katrin (2013) Deregulation of protein methylation in melanoma. European journal of cancer 49 (6), pp. 1305-1313. Fulltext not available.

Chirasani, Sridhar Reddy, Leukel, Petra, Gottfried, Eva, Hochrein, Jochen, Stadler, Katrin, Neumann, Bernhard, Oefner, Peter J., Gronwald, Wolfram, Bogdahn, Ulrich, Hau, Peter, Kreutz, Marina and Grauer, Oliver M. (2013) Diclofenac inhibits lactate formation and efficiently counteracts local immune suppression in a murine glioma model. International Journal of Cancer 132 (4), pp. 843-853. Fulltext not available.

Demir, Fatih, Horntrich, Claudia, Blachutzik, Jörg O, Scherzer, Sönke, Reinders, Yvonne, Kierszniowska, Sylwia, Schulze, Waltraud X., Harms, Gregory S., Hedrich, Rainer, Geiger, Dietmar and Kreuzer, Ines (2013) Arabidopsis nanodomain-delimited ABA signaling pathway regulates the anion channel SLAH3. Proceedings of the National Academy of Sciences of the United States of America 110 (20), pp. 8296-82301.

Pietzner, Julia, Baer, P. C., Duecker, R. P., Merscher, M. B., Satzger-Prodinger, C., Bechmann, I., Wietelmann, A., Del Turco, D., Doering, C., Kuci, S., Bader, P., Schirmer, Sophie, Zielen, S. and Schubert, R. (2013) Bone marrow transplantation improves the outcome of Atm-deficient mice through the migration of ATM-competent cells. Human molecular genetics 22 (3), pp. 493-507. Fulltext not available.

Thomas, Anja, Klein, Matthias S., Stevens, Axel Peter, Reinders, Yvonne, Hellerbrand, Claus, Dettmer, Katja, Gronwald, Wolfram, Oefner, Peter J. and Reinders, Jörg (2013) Changes in the hepatic mitochondrial and membrane proteome in mice fed a non-alcoholic steatohepatitis inducing diet. Journal of proteomics 80, pp. 107-122. Fulltext not available.

Oefner, Peter J., Hölzl, Georg, Shen, Peidong, Shpirer, Isaac, Gefel, Dov, Lavi, Tal, Wolf, Eilon, Cohen, Jonathan, Cinnioglu, Cengiz, Underhill, Peter A, Rosenberg, Noah A., Hochrein, Jochen, Granka, Julie M., Hillel, Jossi and Feldman, Marcus W. (2013) Genetics and the history of the Samaritans: Y-chromosomal microsatellites and genetic affinity between Samaritans and Cohanim. Human Biology 40.

Dettmer, Katja, Gronwald, Wolfram and Oefner, Peter J. (2013) Instrumentelle Bioanalytik zur Stoffwechselanalytik. Blick in die Wissenschaft. Fulltext not available.

2012

Lowin, Torsten, Zhu, Wentao, Dettmer-Wilde, Katja and Straub, Rainer H. (2012) Cortisol-mediated adhesion of synovial fibroblasts is dependent on the degradation of anandamide and activation of the endocannabinoid system. Arthritis and rheumatism 64 (12), pp. 3867-3876. Fulltext not available.

Hochrein, Jochen, Klein, Matthias S., Zacharias, Helena, Li, Juan, Wijffels, Gene, Schirra, Horst Joachim, Spang, Rainer, Oefner, Peter J. and Gronwald, Wolfram (2012) Performance evaluation of algorithms for the classification of metabolic 1H NMR fingerprints. Journal of proteome research 11 (12), pp. 6242-6251. Fulltext not available.

van der Goot, Annemieke, Zhu, Wentao, Vázquez-Manrique, Rafael, Seinstra, Renée I, Dettmer, Katja, Michels, Helen, Farina, Francesca, Krijnen, Jasper, Melki, Ronald, Buijsman, Rogier C, Ruiz Silva, Mariana, Thijssen, Karen L, Kema, Ido P, Neri, Christian, Oefner, Peter J. and Nollen, Ellen A A (2012) Delaying aging and the aging-associated decline in protein homeostasis by inhibition of tryptophan degradation. Proceedings of the National Academy of Sciences of the United States of America 109 (37), pp. 14912-7. Fulltext not available.

Escalante-Pérez, María, Jaborsky, Mario, Reinders, Jörg, Kurzai, Oliver, Hedrich, Rainer and Ache, Peter (2012) Poplar extrafloral nectar is protected against plant and human pathogenic fungus. Molecular plant 5 (5), pp. 1157-1159. Fulltext not available.

Vogelmann, Katja, Drechsel, Gabriele, Bergler, Johannes, Subert, Christa, Philippar, Katrin, Soll, Jürgen, Engelmann, Julia C., Engelsdorf, Timo, Voll, Lars M. and Hoth, Stefan (2012) Early senescence and cell death in Arabidopsis saul1 mutants involves the PAD4-dependent salicylic acid pathway. Plant physiology 159 (4), pp. 1477-1487. Fulltext not available.

Thomas, Anja, Stevens, Axel Peter, Klein, Matthias S., Hellerbrand, Claus, Dettmer, Katja, Gronwald, Wolfram, Oefner, Peter J. and Reinders, Jörg (2012) Early changes in the liver-soluble proteome from mice fed a nonalcoholic steatohepatitis inducing diet. Proteomics 12 (9), pp. 1437-1451. Fulltext not available.

Eckardt, Kai-Uwe, Bärthlein, Barbara, Baid-Agrawal, Seema, Beck, Andreas, Busch, Martin, Eitner, Frank, Ekici, Arif B, Floege, Jürgen, Gefeller, Olaf, Haller, Hermann, Hilge, Robert, Hilgers, Karl F, Kielstein, Jan T, Krane, Vera, Köttgen, Anna, Kronenberg, Florian, Oefner, Peter J., Prokosch, Hans-Ulrich, Reis, André, Schmid, Matthias, Schaeffner, Elke, Schultheiss, Ulla T, Seuchter, Susanne A, Sitter, Thomas, Sommerer, Claudia, Walz, Gerd, Wanner, Christoph, Wolf, Gunter, Zeier, Martin and Titze, Stephanie (2012) The German Chronic Kidney Disease (GCKD) study: design and methods. Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association 27 (4), pp. 1454-1460. Fulltext not available.

Primas, Helga, Kroiss, Regina, Kalteis, Karin, Rappaport, Christine, Muhr, Daniela, Primas, Christian, Kubista, Ernst, Horvat, Reinhard, Oefner, Peter J., Singer, Christian F. and Wagner, Teresa (2012) Impact of lifestyle factors on preneoplastic changes in prophylactic oophorectomies of BRCA mutation carriers. European journal of cancer prevention : the official journal of the European Cancer Prevention Organisation (ECP) 21 (2), pp. 199-204. Fulltext not available.

Sanges, C., Scheuermann, C., Zahedi, R. P., Sickmann, A., Lamberti, A., Migliaccio, N., Baljuls, A., Marra, M., Zappavigna, S., Reinders, Jörg, Rapp, U., Abbruzzese, A., Caraglia, M. and Arcari, P. (2012) Raf kinases mediate the phosphorylation of eukaryotic translation elongation factor 1A and regulate its stability in eukaryotic cells. Cell Death and Disease 3, e276.

Almstetter, Martin F. (2012) Tools and applications for one- and two-dimensional
gas chromatography – time-of-flight mass spectrometry-based metabolomics.
PhD, Universität Regensburg.

Almstetter, Martin F., Oefner, Peter J. and Dettmer, Katja (2012) Comprehensive two-dimensional gas chromatography in metabolomics. Analytical and bioanalytical chemistry 402 (6), pp. 1993-2013. Fulltext not available.

Klein, Matthias S., Buttchereit, Nina, Miemczyk, Sebastian P, Immervoll, Ann-Kathrin, Louis, Caridad, Wiedemann, Steffi, Junge, Wolfgang, Thaller, Georg, Oefner, Peter J. and Gronwald, Wolfram (2012) NMR metabolomic analysis of dairy cows reveals milk glycerophosphocholine to phosphocholine ratio as prognostic biomarker for risk of ketosis. Journal of proteome research 11 (2), pp. 1373-1381. Fulltext not available.

Dettmer, Katja, Stevens, Axel Peter, Fagerer, Stephan R, Kaspar, Hannelore and Oefner, Peter J. (2012) Amino acid analysis in physiological samples by GC-MS with propyl chloroformate derivatization and iTRAQ-LC-MS/MS. Methods in molecular biology 828, pp. 165-181. Fulltext not available.

Dettmer, Katja, Stevens, Axel Peter, Fagerer, Stephan R, Kaspar, Hannelore and Oefner, Peter J. (2012) Amino acid analysis in physiological samples by GC-MS with propyl chloroformate derivatization and iTRAQ-LC-MS/MS. Methods in molecular biology 828, pp. 165-181. Fulltext not available.

Almstetter, Martin F., Oefner, Peter J. and Dettmer, Katja (2012) Metabolic fingerprinting using comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Methods in molecular biology 815, pp. 399-411. Fulltext not available.

Schmidt, Jennifer, Riechers, Alexander, Stoll, Raphael, Amann, Thomas, Fink, Florian, Spruss, Thilo, Gronwald, Wolfram, König, Burkhard, Hellerbrand, Claus and Bosserhoff, Anja Katrin (2012) Targeting melanoma metastasis and immunosuppression with a new mode of melanoma inhibitory activity (MIA) protein inhibition. PloS ONE 7 (5), e37941.

2011

Wingenter, Karina, Trentmann, Oliver, Winschuh, Irina, Hörmiller, Imke I, Heyer, Arnd G., Reinders, Jörg, Schulz, Alexander, Geiger, Dietmar, Hedrich, Rainer and Neuhaus, H. Ekkehard (2011) A member of the mitogen-activated protein 3-kinase family is involved in the regulation of plant vacuolar glucose uptake. The Plant journal 68 (5), pp. 890-900. Fulltext not available.

Zhu, Wentao, Stevens, Axel Peter, Dettmer, Katja, Gottfried, Eva, Hoves, Sabine, Kreutz, Marina, Holler, Ernst, Canelas, André B., Kema, Ido and Oefner, Peter J. (2011) Quantitative profiling of tryptophan metabolites in serum, urine, and cell culture supernatants by liquid chromatography-tandem mass spectrometry. Analytical and bioanalytical chemistry 401 (10), pp. 3249-3261. Fulltext not available.

Landfried, Karin, Zhu, Wentao, Waldhier, Magdalena Ch., Schulz, Ute, Ammer, Julia, Holler, Barbara, Wolff, Daniel, Edinger, Matthias, Peter, Katrin, Kreutz, Marina, Andreesen, Reinhard, Oefner, Peter J. and Holler, Ernst (2011) Tryptophan catabolism is associated with acute GVHD after human allogeneic stem cell transplantation and indicates activation of indoleamine 2,3-dioxygenase. Blood 118 (26), pp. 6971-6974. Fulltext not available.

Wachsmuth, Christian, Almstetter, Martin F., Waldhier, Magdalena Ch., Gruber, Michael, Nürnberger, Nadine, Oefner, Peter J. and Dettmer, Katja (2011) Performance evaluation of gas chromatography-atmospheric pressure chemical ionization-time-of-flight mass spectrometry for metabolic fingerprinting and profiling. Analytical chemistry 83 (19), pp. 7514-7322. Fulltext not available.

Almstetter, Martin F., Appel, Inka, Dettmer, Katja, Gruber, Michael and Oefner, Peter J. (2011) Comparison of two algorithmic data processing strategies for metabolic fingerprinting by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Journal of chromatography A 1218 (39), pp. 7031-7038. Fulltext not available.

Appel, Inka, Gronwald, Wolfram and Spang, Rainer (2011) Estimating classification probabilities in high-dimensional diagnostic studies. Bioinformatics 27 (18), pp. 2563-2570. Fulltext not available.

Stevens, Axel Peter (2011) Analysis of intermediates of the methionine and polyamine metabolism by liquid chromatography-tandem mass spectrometry. PhD, Universität Regensburg.

Goldgar, D. E., Healey, S., Dowty, J. G., Da Silva, L., Chen, X., Spurdle, A. B., Terry, M. B., Daly, M. J., Buys, S. M., Southey, M. C., Andrulis, I., John, E. M., Khanna, K. K., Hopper, J. L., Oefner, Peter J., Lakhani, S. and Chenevix-Trench, G. (2011) Rare variants in the ATM gene and risk of breast cancer. Breast Cancer Research 13 (4), R73.

Fink, Florian (2011) Computational analysis of docked protein-protein complexes. PhD, Universität Regensburg.

Waldhier, Magdalena Ch., Almstetter, Martin F., Nürnberger, Nadine, Gruber, Michael, Dettmer, Katja and Oefner, Peter J. (2011) Improved enantiomer resolution and quantification of free D-amino acids in serum and urine by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Journal of chromatography A 1218 (28), pp. 4537-4544. Fulltext not available.

Gronwald, Wolfram, Klein, Matthias S., Zeltner, Raoul, Schulze, Bernd-Detlef, Reinhold, Stephan W., Deutschmann, Markus, Immervoll, Ann-Kathrin, Böger, Carsten A., Banas, Bernhard, Eckardt, Kai-Uwe and Oefner, Peter J. (2011) Detection of autosomal dominant polycystic kidney disease by NMR spectroscopic fingerprinting of urine. Kidney international 79 (11), pp. 1244-1253. Fulltext not available.

Klein, Matthias S., Dorn, Christoph , Saugspier, Michael Sebastian, Hellerbrand, Claus, Oefner, Peter J. and Gronwald, Wolfram (2011) Discrimination of steatosis and NASH in mice using nuclear magnetic resonance spectroscopy. Metabolomics 7 (2), pp. 237-246. Fulltext not available.

Eberhart, Karin, Rainer, Johannes, Bindreither, Daniel, Ritter, Ireen, Gnaiger, Erich, Kofler, Reinhard, Oefner, Peter J. and Renner, Kathrin (2011) Glucocorticoid-induced alterations in mitochondrial membrane properties and respiration in childhood acute lymphoblastic leukemia. Biochimica et biophysica acta 1807 (6), pp. 719-725. Fulltext not available.

Fink, Florian, Hochrein, Jochen, Wolowski, Vincent, Merkl, Rainer and Gronwald, Wolfram (2011) PROCOS: Computational analysis of protein–protein complexes. Journal of Computational Chemistry 32 (12), pp. 2575-2586. Fulltext not available.

Jrad-Lamine, Aicha, Henry-Berger, Joelle, Gourbeyre, Pascal, Damon-Soubeyrand, Christelle, Lenoir, Alain, Combaret, Lydie, Saez, Fabrice, Kocer, Ayhan, Tone, Shigenobu, Fuchs, Dietmar, Zhu, Wentao, Oefner, Peter J., Munn, David H., Mellor, Andrew L., Gharbi, Najoua, Cadet, Rémi, Aitken, R. John and Drevet, Joël R. (2011) Deficient tryptophan catabolism along the kynurenine pathway reveals that the epididymis is in a unique tolerogenic state. The Journal of biological chemistry 286 (10), pp. 8030-8042. Fulltext not available.

Kirovski, Georgi, Stevens, Axel Peter, Czech, Barbara, Dettmer, Katja, Weiss, Thomas S., Wild, Peter, Hartmann, Arndt, Bosserhoff, Anja-Katrin, Oefner, Peter J. and Hellerbrand, Claus (2011) Down-regulation of methylthioadenosine phosphorylase (MTAP) induces progression of hepatocellular carcinoma via accumulation of 5'-deoxy-5'-methylthioadenosine (MTA). The American journal of pathology 178 (3), pp. 1145-1152. Fulltext not available.

Dettmer, Katja, Nürnberger, Nadine, Kaspar, Hannelore, Gruber, Michael, Almstetter, Martin F. and Oefner, Peter J. (2011) Metabolite extraction from adherently growing mammalian cells for metabolomics studies: optimization of harvesting and extraction protocols. Analytical and bioanalytical chemistry 399 (3), pp. 1127-1139. Fulltext not available.

Dettmer, Katja, Stevens, A., Gronwald, Wolfram, Hellerbrand, Claus and Oefner, Peter J. (2011) Mass spectrometry based metabolomics to study the development of Non-alcoholic steatohepatitis. Zeitschrift für Gastroenterologie 49. Fulltext not available.

2010

Pleiser, Sandra, Rock, Rebecca, Wellmann, Jutta, Gessler, Manfred and Kerkhoff, Eugen (2010) Expression patterns of the mouse Spir-2 actin nucleator. Gene expression patterns 10 (7-8), pp. 345-350. Fulltext not available.

Dettmer, Katja, Almstetter, Martin F., Appel, Inka, Nürnberger, Nadine, Schlamberger, Gregor, Gronwald, Wolfram, Meyer, Heinrich H. D. and Oefner, Peter J. (2010) Comparison of serum versus plasma collection in gas chromatography--mass spectrometry-based metabolomics. Electrophoresis 31 (14), pp. 2365-2373. Fulltext not available.

Stevens, Axel Peter, Dettmer, Katja, Kirovski, Georgi, Samejima, Keijiro, Hellerbrand, Claus, Bosserhoff, Anja-Katrin and Oefner, Peter J. (2010) Quantification of intermediates of the methionine and polyamine metabolism by liquid chromatography-tandem mass spectrometry in cultured tumor cells and liver biopsies. Journal of chromatography A 1217 (19), pp. 3282-3288. Fulltext not available.

Waldhier, Magdalena Ch., Dettmer, Katja, Gruber, Michael and Oefner, Peter J. (2010) Comparison of derivatization and chromatographic methods for GC-MS analysis of amino acid enantiomers in physiological samples. Journal of chromatography B 878 (15-16), pp. 1103-1112. Fulltext not available.

Klein, Matthias S., Almstetter, Martin F., Schlamberger, G., Nürnberger, Nadine, Dettmer, Katja, Oefner, Peter J., Meyer, H. H. D., Wiedemann, Steffi and Gronwald, Wolfram (2010) Nuclear magnetic resonance and mass spectrometry-based milk metabolomics in dairy cows during early and late lactation. Journal of dairy science 93 (4), pp. 1539-1550. Fulltext not available.

Amann, Thomas, Bataille, Frauke, Spruss, Thilo, Dettmer, Katja, Wild, Peter J., Liedtke, Christian, Mühlbauer, Marcus, Kiefer, Paul, Oefner, Peter J., Trautwein, Christian, Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2010) Reduced expression of fibroblast growth factor receptor 2IIIb in hepatocellular carcinoma induces a more aggressive growth. The American journal of pathology 176 (3), pp. 1433-42. Fulltext not available.

Dietl, Katrin, Renner, Kathrin, Dettmer, Katja, Timischl, Birgit, Eberhart, Karin, Dorn, Christoph , Hellerbrand, Claus, Kastenberger, Michael, Kunz-Schughart, Leoni A., Oefner, Peter J., Andreesen, Reinhard, Gottfried, Eva and Kreutz, Marina (2010) Lactic acid and acidification inhibit TNF secretion and glycolysis of human monocytes. Journal of immunology 184 (3), pp. 1200-1209. Fulltext not available.

Gronwald, Wolfram and Kalbitzer, Hans Robert (2010) Automated protein NMR structure determination in solution. Methods in molecular biology 673, pp. 95-127. Fulltext not available.

Lottaz, Claudio, Beier, Dagmar, Meyer, Katharina, Kumar, Praveen, Hermann, Andreas, Schwarz, Johannes, Junker, Markus, Oefner, Peter J., Bogdahn, Ulrich, Wischhusen, J, Spang, Rainer, Storch, Alexander and Beier, Christoph P. (2010) Transcriptional profiles of CD133+ and CD133- glioblastoma-derived cancer stem cell lines suggest different cells of origin. Cancer research 70 (5), pp. 2030-2040. Fulltext not available.

2009

Thieme, Marian, Lottaz, Claudio, Niederstätter, Harald, Parson, Walther, Spang, Rainer and Oefner, Peter J. (2009) ReseqChip: automated integration of multiple local context probe data from the MitoChip array in mitochondrial DNA sequence assembly. BMC bioinformatics 10, p. 440.

Filatova, Alina, Leyerer, Marina, Gorboulev, Valentin, Chintalapati, Chakravarthi, Reinders, Yvonne, Müller, Thomas D., Srinivasan, Aruna, Hübner, Stefan and Koepsell, Hermann (2009) Novel shuttling domain in a regulator (RSC1A1) of transporter SGLT1 steers cell cycle-dependent nuclear location. Traffic 10 (11), pp. 1599-1618. Fulltext not available.

Tavtigian, Sean V., Oefner, Peter J., Babikyan, Davit, Hartmann, Anne, Healey, Sue, Le Calvez-Kelm, Florence, Lesueur, Fabienne, Byrnes, Graham B., Chuang, Shu-Chun, Forey, Nathalie, Feuchtinger, Corinna, Gioia, Lydie, Hall, Janet, Hashibe, Mia, Herte, Barbara, McKay-Chopin, Sandrine, Thomas, Alun, Vallée, Maxime P., Voegele, Catherine, Webb, Penelope M., Whiteman, David C., Sangrajrang, Suleeporn, Hopper, John L., Southey, Melissa C., Andrulis, Irene L., John, Esther M. and Chenevix-Trench, Georgia (2009) Rare, evolutionarily unlikely missense substitutions in ATM confer increased risk of breast cancer. American journal of human genetics 85 (4), pp. 427-446. Fulltext not available.

Almstetter, Martin F., Appel, Inka, Gruber, Michael, Lottaz, Claudio, Timischl, Birgit, Spang, Rainer, Dettmer, Katja and Oefner, Peter J. (2009) Integrative normalization and comparative analysis for metabolic fingerprinting by comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. Analytical chemistry 81 (14), pp. 5731-5739. Fulltext not available.

Kaspar, Hannelore, Dettmer, Katja, Chan, Queenie, Daniels, Scott, Nimkar, Subodh, Daviglus, Martha L., Stamler, Jeremiah, Elliott, Paul and Oefner, Peter J. (2009) Urinary amino acid analysis: a comparison of iTRAQ-LC-MS/MS, GC-MS, and amino acid analyzer. Journal of chromatography B 877 (20-21), pp. 1838-1846. Fulltext not available.

Gimmler, Jens, Gronwald, Wolfram, Möller, Heiko M. and Exner, Thomas E. (2009) Protein structure calculation with a max-min ant system. Chemistry Central Journal 3 (Supl I), P52.

Waldhier, Magdalena Ch., Gruber, Michael, Dettmer, Katja and Oefner, Peter J. (2009) Capillary electrophoresis and column chromatography in biomedical chiral amino acid analysis. Analytical and bioanalytical chemistry 394 (3), pp. 695-706. Fulltext not available.

Voss, Katrin, Stahl, Sonja, Hogan, Benjamin M., Reinders, Jörg, Schleider, Elisa, Schulte-Merker, Stefan and Felbor, Ute (2009) Functional analyses of human and zebrafish 18-amino acid in-frame deletion pave the way for domain mapping of the cerebral cavernous malformation 3 protein. Human mutation 30 (6), pp. 1003-1011. Fulltext not available.

Baskaran, Kumaran, Kirchhöfer, Renate, Huber, Fritz, Trenner, Jochen, Brunner, Konrad, Gronwald, Wolfram, Neidig, Klaus-Peter and Kalbitzer, Hans Robert (2009) Chemical shift optimization in multidimensional NMR spectra by AUREMOL-SHIFTOPT. Journal of biomolecular NMR 43 (4), pp. 197-210. Fulltext not available.

Amann, Thomas, Maegdefrau, Ulrike, Hartmann, Arndt, Agaimy, Abbas, Marienhagen, Jörg, Weiss, Thomas S., Stoeltzing, Oliver, Warnecke, Christina, Schölmerich, Jürgen, Oefner, Peter J., Kreutz, Marina, Bosserhoff, Anja-Katrin and Hellerbrand, Claus (2009) GLUT1 expression is increased in hepatocellular carcinoma and promotes tumorigenesis. The American journal of pathology 174 (4), pp. 1544-1552. Fulltext not available.

Vlad, Marcel O., Corlan, Alexandru D., Morán, Federico, Spang, Rainer, Oefner, Peter J. and Ross, John (2009) Kinetic laws, phase-phase expansions, renormalization group, and INR calibration. Proceedings of the National Academy of Sciences of the United States of America 106 (16), pp. 6465-6470. Fulltext not available.

Kaput, Jim, Cotton, Richard G. H., Hardman, Lauren, Watson, Michael, Al Aqeel, Aida I., Al-Aama, Jumana Y., Al-Mulla, Fahd, Alonso, Santos, Aretz, Stefan, Auerbach, Arleen D., Bapat, Bharati, Bernstein, Inge T., Bhak, Jong, Bleoo, Stacey L., Blöcker, Helmut, Brenner, Steven E., Burn, John, Bustamante, Mariona, Calzone, Rita, Cambon-Thomsen, Anne, Cargill, Michele, Carrera, Paola, Cavedon, Lawrence, Cho, Yoon Shin, Chung, Yeun-Jun, Claustres, Mireille, Cutting, Garry, Dalgleish, Raymond, den Dunnen, Johan T., Díaz, Carlos, Dobrowolski, Steven, dos Santos, M. Rosário N., Ekong, Rosemary, Flanagan, Simon B., Flicek, Paul, Furukawa, Yoichi, Genuardi, Maurizio, Ghang, Ho, Golubenko, Maria V., Greenblatt, Marc S., Hamosh, Ada, Hancock, John M., Hardison, Ross, Harrison, Terence M., Hoffmann, Robert, Horaitis, Rania, Howard, Heather J., Barash, Carol Isaacson, Izagirre, Neskuts, Jung, Jongsun, Kojima, Toshio, Laradi, Sandrine, Lee, Yeon-Su, Lee, Jong-Young, Gil-da-Silva-Lopes, Vera L., Macrae, Finlay A., Maglott, Donna, Marafie, Makia J., Marsh, Steven G. E., Matsubara, Yoichi, Messiaen, Ludwine M., Möslein, Gabriela, Netea, Mihai G., Norton, Melissa L., Oefner, Peter J., Oetting, William S., O'Leary, James C., de Ramirez, Ana Maria Oller, Paalman, Mark H., Parboosingh, Jillian, Patrinos, George P., Perozzi, Giuditta, Phillips, Ian R., Povey, Sue, Prasad, Suyash, Qi, Ming, Quin, David J., Ramesar, Rajkumar S., Richards, C Sue, Savige, Judith, Scheible, Dagmar G., Scott, Rodney J., Seminara, Daniela, Shephard, Elizabeth A., Sijmons, Rolf H., Smith, Timothy D., Sobrido, María-Jesús, Tanaka, Toshihiro, Tavtigian, Sean V., Taylor, Graham R., Teague, Jon, Töpel, Thoralf, Ullman-Cullere, Mollie, Utsunomiya, Joji, van Kranen, Henk J., Vihinen, Mauno, Webb, Elizabeth, Weber, Thomas K., Yeager, Meredith, Yeom, Young I., Yim, Seon-Hee and Yoo, Hyang-Sook (2009) Planning the human variome project: the Spain report. Human mutation 30 (4), pp. 496-510. Fulltext not available.

Fink, Florian, Ederer, Stephan and Gronwald, Wolfram (2009) Protein-Protein Interaction Analysis by Docking. Algorithms 2 (1), pp. 429-436.

Anchang, Benedict Nchang, Sadeh, Mohammad Javad, Jacob, Juby, Tresch, Achim, Vlad, Marcel O., Oefner, Peter J. and Spang, Rainer (2009) Modeling the temporal interplay of molecular signaling and gene expression by using dynamic nested effects models. Proceedings of the National Academy of Sciences of the United States of America 106 (16), pp. 6447-6452. Fulltext not available.

Stevens, Axel Peter, Spangler, Barbara, Wallner, Susanne, Kreutz, Marina, Dettmer, Katja, Oefner, Peter J. and Bosserhoff, Anja-Katrin (2009) Direct and tumor microenvironment mediated influences of 5'-deoxy-5'-(methylthio)adenosine on tumor progression of malignant melanoma. Journal of cellular biochemistry 106 (2), pp. 210-219. Fulltext not available.

Schmid, Markus B, Fleischmann, Matthias, D'Elia, Valerio, Reiser, Oliver, Gronwald, Wolfram and Gschwind, Ruth M. (2009) Residual dipolar couplings in short peptidic foldamers: combined analyses of backbone and side-chain conformations and evaluation of structure coordinates of rigid unnatural amino acids. Chembiochem 10 (3), pp. 440-444. Fulltext not available.

Kaspar, Hannelore, Dettmer, Katja, Gronwald, Wolfram and Oefner, Peter J. (2009) Advances in amino acid analysis. Analytical and bioanalytical chemistry 393 (2), pp. 445-452. Fulltext not available.

Fischer, Andreas, Baljuls, Angela, Reinders, Jörg, Nekhoroshkova, Elena, Sibilski, Claudia, Metz, Renate, Albert, Stefan, Rajalingam, Krishnaraj, Hekman, Mirko and Rapp, Ulf R. (2009) Regulation of RAF activity by 14-3-3 proteins: RAF kinases associate functionally with both homo- and heterodimeric forms of 14-3-3 proteins. The Journal of biological chemistry 284 (5), pp. 3183-3194. Fulltext not available.

Hartmann, Anne, Thieme, Marian, Nanduri, Lahiri K, Stempfl, Thomas, Moehle, Christoph, Kivisild, Toomas and Oefner, Peter J. (2009) Validation of microarray-based resequencing of 93 worldwide mitochondrial genomes. Human mutation 30 (1), pp. 115-122. Fulltext not available.

Baumann, Fusun, Leukel, Petra, Doerfelt, Anett, Beier, Christoph P., Dettmer, Katja, Oefner, Peter J., Kastenberger, Michael, Kreutz, Marina, Nickl-Jockschat, Thomas, Bogdahn, Ulrich, Bosserhoff, Anja-Katrin and Hau, Peter (2009) Lactate promotes glioma migration by TGF-beta2-dependent regulation of matrix metalloproteinase-2. Neuro-oncology 11 (4), pp. 368-380. Fulltext not available.

2008

Randolt, K., Gimple, O., Geissendorfer, J., Reinders, Jörg, Prusko, C., Mueller, M. J., Albert, S., Tautz, J. and Beier, H. (2008) Immune-related proteins induced in the hemolymph after aseptic and septic injury differ in honey bee worker larvae and adults. Archives of Insect Biochemistry and Physiology 69 (4), pp. 155-167. Fulltext not available.

Gronwald, Wolfram, Klein, M. S., Kaspar, Hannelore, Fagerer, S. R., Nürnberger, N., Dettmer, Katja, Bertsch, T. and Oefner, Peter J. (2008) Urinary metabolite quantification employing 2D NMR spectroscopy. Anal. Chem. 80 (23), pp. 9288-9297. Fulltext not available.

Sinha, H., David, L., Pascon, R. C., Clauder-Münster, S., Krishnakumar, S., Nguyen, M., Shi, G., Dean, J., Davis, R. W., Oefner, Peter J., McCusker, J. H. and Steinmetz, L. M. (2008) Sequential elimination of major-effect contributors identifies additional quantitative trait loci conditioning high-temperature growth in yeast. Genetics 180 (3), pp. 1661-1670. Fulltext not available.

Stevens, A. P., Dettmer, Katja, Wallner, S., Bosserhoff, Anja-Katrin and Oefner, Peter J. (2008) Quantitative analysis of 5'-deoxy-5'-methylthioadenosine in melanoma cells by liquid chromatography-stable isotope ratio tandem mass spectrometry. Journal of Chromatography B 876 (1), pp. 123-128. Fulltext not available.

Kroiss, R., Winkler, V., Kalteis, K., Bikas, D., Rudas, M., Tea, M., Fuerhauser, C., Muhr, D., Cerny, H., Glueck, S., Petru, E., Concin, H., Kubista, E. and Oefner, Peter J. (2008) Prevalence of pre-malignant and malignant lesions in prophylactic mastectomy specimens of BRCA1 mutation carriers: comparison with a control group. Journal of Cancer Research and Clinical Oncology 134 (10), pp. 1113-1121. Fulltext not available.

Gronwald, Wolfram, Bomke, J., Maurer, T., Domogalla, B., Huber, F., Schumann, F., Kremer, W., Fink, F., Rysiok, T., Frech, M. and Kalbitzer, Hans Robert (2008) Structure of the leech protein saratin and characterization of its binding to collagen. J. Mol. Biol. 381 (4), pp. 913-927. Fulltext not available.

Henn, B. M., Gignoux, C., Lin, A. A., Oefner, Peter J., Shen, P., Scozzari, R., Cruciani, F., Tishkoff, S. A., Mountain, J. L. and Underhill, P. A. (2008) Y-chromosomal evidence of a pastoralist migration through Tanzania to southern Africa. Proceedings of the National Academy of Sciences of the United States of America (PNAS) 105 (31), pp. 10693-10698. Fulltext not available.

Kaspar, Hannelore, Dettmer, Katja, Gronwald, Wolfram and Oefner, Peter J. (2008) Automated GC-MS analysis of free amino acids in biological fluids. J. Chromatogr. B 870 (2), pp. 222-232. Fulltext not available.

Aronov, P. A., Hall, L. M., Dettmer, Katja, Stephensen, C. B. and Hammock, B. D. (2008) Metabolic profiling of major vitamin D metabolites using Diels-Alder derivatization and ultra-performance liquid chromatography-tandem mass spectrometry. Analytical and Bioanalytical Chemistry 391 (5), pp. 1917-1930. Fulltext not available.

Rizzi, A., Oefner, Peter J. and Kenndler, E. (2008) Bioanalysis. Electrophoresis 29 (12), pp. 2447-2448. Fulltext not available.

Timischl, B., Dettmer, Katja, Kaspar, H., Thieme, M. and Oefner, Peter J. (2008) Development of a quantitative, validated capillary electrophoresis-time of flight-mass spectrometry method with integrated high-confidence analyte identification for metabolomics. Electrophoresis 29 (10), pp. 2203-2214. Fulltext not available.

Timischl, Birgit, Dettmer, Katja and Oefner, Peter J. (2008) Hyphenated mass spectrometry in the analysis of the central carbon metabolism. Analytical and Bioanalytical Chemistry 391, pp. 895-898. Fulltext not available.

Vlad, M. O., Corlan, A. D., Moran, F., Oefner, Peter J. and Ross, J. (2008) Incremental parameter evaluation from incomplete data with application to the population pharmacology of anticoagulants. Proceedings of the National Academy of Sciences of the United States of America (PNAS 105 (12), pp. 4627-4632. Fulltext not available.

Ehlers, A., Oker, E., Bentink, Stefan, Lenze, D., Stein, H. and Hummel, M. (2008) Histone acetylation and DNA demethylation of B cells result in a Hodgkin-like phenotype. Leukemia 22 (4), pp. 835-841. Fulltext not available.

Hirsch, Burkhard, Hummel, M., Bentink, Stefan, Fouladi, F., Spang, Rainer, Zollinger, R., Stein, H. and Durkop, H. (2008) CD30-induced signaling is absent in Hodgkin's cells but present in anaplastic large cell lymphoma cells. The American Journal of Pathology 172 (2), pp. 510-520. Fulltext not available.

Gronwald, Wolfram, Hohm, T. and Hoffmann, D. (2008) Evolutionary Pareto-optimization of stably folding peptides. BMC Bioinformatics 9, p. 109.

Quinlan, M. E. and Kerkhoff, Eugen (2008) Actin nucleation: bacteria get in-Spired. Nat. Cell Biol. 10 (1), pp. 13-15. Fulltext not available.

Hennig, A., Reinders, Yvonne, Giritch, A., Reinders, Jörg and Warzecha, H. (2008) Assessment of Different Expression Strategies for the Production of a Recombinant Lipoprotein Vaccine in Plants. Open Biotechnology Journal 2, pp. 51-55.

Brunner, Konrad, Gronwald, Wolfram, Fischer, A., Trenner, J., Neidig, K.-P. and Kalbitzer, Hans Robert (2008) Automatic Sequential NOESY Assignment and NMR Structure Improvement by X-Ray. In: Hansmann, U. and Meinke, J., (eds.) From Computational Biophysics to Systems Biology (CBSB08). Proceedings of the NIC Workshop 2008. NIC series, 40. John von Neumann Institute for Computing, Jülich, pp. 173-176. ISBN 978-3-9810843-6-8.

Herold, Daniela, Lutter, D., Schachtner, R., Tome, A. M., Schmitz, G. and Lang, E. W. (2008) Comparison of unsupervised and supervised gene selection methods. Conf Proc IEEE Eng Med Biol Soc 2008, pp. 5212-5215. Fulltext not available.

Dueckershoff, K., Müller, Stefan, Müller, Martin J. and Reinders, Jörg (2008) Impact of cyclopentenone-oxylipins on the proteome of Arabidopsis thaliana. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1784, pp. 1975-1985. Fulltext not available.

Fink, Florian, Ederer, S. and Gronwald, Wolfram (2008) Protein-Protein Interaction Prediction. In: Hansmann, U. and Meinke, J., (eds.) From Computational Biophysics to Systems Biology (CBSB08). Proceedings of the NIC Workshop 2008. NIC series, 40. John von Neumann Institute for Computing, Jülich, pp. 209-212. ISBN 978-3-9810843-6-8.

2007

Borisov, Sergey M., Waldhier, Magdalena C., Klimant, Ingo and Wolfbeis, Otto S. (2007) Optical Carbon Dioxide Sensors Based on Silicone-Encapsulated Room-Temperature Ionic Liquids. Chemistry of materials 19 (25), pp. 6187-6194. Fulltext not available.

Reinders, Jörg, Wagner, K., Zahedi, R. P., Stojanovski, D., Eyrich, B., van der Laan, M., Rehling, P., Sickmann, A., Pfanner, N. and Meisinger, C. (2007) Profiling phosphoproteins of yeast mitochondria reveals a role of phosphorylation in assembly of the ATP synthase. Molecular and Cellular Proteomics 6 (11), pp. 1896-1906. Fulltext not available.

Schonleben, S., Sickmann, A., Mueller, M. J. and Reinders, Jörg (2007) Proteome analysis of Apis mellifera royal jelly. Analytical and Bioanalytical Chemistry 389 (4), pp. 1087-1093. Fulltext not available.

Stahl, S., Reinders, Yvonne, Asan, E., Mothes, W., Conzelmann, E., Sickmann, A. and Felbor, U. (2007) Proteomic analysis of cathepsin B- and L-deficient mouse brain lysosomes. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1774 (10), pp. 1237-1246. Fulltext not available.

Dettmer, Katja, Hanna, D., Whetstone, P., Hansen, R. and Hammock, B. D. (2007) Autism and urinary exogenous neuropeptides: development of an on-line SPE-HPLC-tandem mass spectrometry method to test the opioid excess theory. Analytical and Bioanalytical Chemistry 388 (8), pp. 1643-1651. Fulltext not available.

Wei, W., McCusker, J. H., Hyman, R. W., Jones, T., Ning, Y., Cao, Z., Gu, Z., Bruno, D., Miranda, M., Nguyen, M., Wilhelmy, J., Komp, C., Tamse, R., Wang, X., Jia, P., Luedi, P., Oefner, Peter J., David, L., Dietrich, F. S., Li, Y., Davis, R. W. and Steinmetz, L. M. (2007) Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789. Proceedings of the National Academy of Sciences of the United States of America (PNAS) 104 (31), pp. 12825-12830. Fulltext not available.

Markowetz, F., Kostka, D., Troyanskaya, O. G. and Spang, Rainer (2007) Nested effects models for high-dimensional phenotyping screens. Bioinformatics 23 (13), i305-i312.

Scheid, Stefanie and Spang, Rainer (2007) Compensating for unknown confounders in microarray data analysis using filtered permutations. Journal of Computational Biology 14 (5), pp. 669-681. Fulltext not available.

Reinders, Jörg and Sickmann, Albert (2007) Modificomics: posttranslational modifications beyond protein phosphorylation and glycosylation. Biomolecular Engineering 24 (2), pp. 169-177. Fulltext not available.

Beier, D., Hau, Peter, Proescholdt, M., Lohmeier, A., Wischhusen, J., Oefner, Peter J., Aigner, L., Brawanski, Alexander, Bogdahn, Ulrich and Beier, Christoph P. (2007) CD133(+) and CD133(-) glioblastoma-derived cancer stem cells show differential growth characteristics and molecular profiles. Cancer Research 67 (9), pp. 4010-4015. Fulltext not available.

Gross, E., Hölzl, Georg, Arnold, N., Hauenstein, E., Jacobsen, A., Schulze, K., Ramser, J., Meindl, A., Kiechle, M. and Oefner, Peter J. (2007) Allelic loss analysis by denaturing high-performance liquid chromatography and electrospray ionization mass spectrometry. Human Mutation 28 (3), pp. 303-311. Fulltext not available.

Dettmer, Katja, Aronov, P. A. and Hammock, B. D. (2007) Mass spectrometry-based metabolomics. Mass Spectrometry Reviews (Mass Spectrom Rev) 26 (1), pp. 51-78. Fulltext not available.

Stefan, E., Wiesner, B., Baillie, G. S., Mollajew, R., Henn, V., Lorenz, D., Furkert, J., Santamaria, K., Nedvetsky, P., Hundsrucker, Christian, Beyermann, M., Krause, E., Pohl, P., Gall, I., MacIntyre, A. N., Bachmann, S., Houslay, M. D., Rosenthal, W. and Klussmann, E. (2007) Compartmentalization of cAMP-dependent signaling by phosphodiesterase-4D is involved in the regulation of vasopressin-mediated water reabsorption in renal principal cells. Journal of the American Society of Nephrology (JASN) 18 (1), pp. 199-212. Fulltext not available.

Kalbitzer, Hans Robert, Kremer, Werner, Schumann, Frank, Spörner, Michael and Gronwald, Wolfram (2007) 7. Elucidation of protein-protein and protein-ligand interactions by NMR-spectroscopy. In: Schuck, Peter, (ed.) Protein interactions: biophysical approaches for the study of complex reversible systems. Protein Reviews, 5 (7). Springer, New York, NY, pp. 189-230. ISBN 978-0-387-35965-6, 978-0-387-35966-3 (e-ISBN). Fulltext not available.

Reinders, Jörg and Sickmann, A. (2007) Proteomics of yeast mitochondria. Methods in Molecular Biology 372, pp. 543-557. Fulltext not available.

Fink, Florian, Merkl, Rainer and Gronwald, Wolfram (2007) Verification of protein-protein interactions by use of docking techniques. In: Hansmann, U. H. E. and Meinke, J. Mohanty S. and Zimmermann, O., (eds.) From computational biophysics to systems biology (CBSB07). Proceedings of the NIC Workshop 2007. NIC Series, 36. John von Neumann Institute for Computing, Jülich, pp. 125-127. ISBN 978-3-9810843-2-0.

2006

Waddell, N., Jonnalagadda, J., Marsh, A., Grist, S., Jenkins, M., Hobson, K., Taylor, M., Lindeman, G. J., Tavtigian, S. V., Suthers, G., Goldgar, D., Oefner, Peter J., Taylor, D., Grimmond, S., Khanna, K. K. and Chenevix-Trench, G. (2006) Characterization of the breast cancer associated ATM 7271T>G (V2424G) mutation by gene expression profiling. Genes Chromosomes Cancer 45 (12), pp. 1169-1181. Fulltext not available.

Kayser, M., Brauer, S., Cordaux, R., Casto, A., Lao, O., Zhivotovsky, L. A., Moyse-Faurie, C., Rutledge, R. B., Schiefenhoevel, W., Gil, D., Lin, A. A., Underhill, P. A., Oefner, Peter J., Trent, R. J. and Stoneking, M. (2006) Melanesian and Asian origins of Polynesians: mtDNA and Y chromosome gradients across the Pacific. Molecular Biology and Evolution 23 (11), pp. 2234-2244.

Vlad, M. O., Oefner, Peter J. and Ross, J. (2006) Transition event statistics in genetics and disordered kinetics. Theoretical approaches for extracting rate distributions from experimental data. Journal of Physical Chemistry B 110 (38), pp. 18945-18952. Fulltext not available.

Schmelzer, K. R., Wheelock, A. M., Dettmer, Katja, Morin, D. and Hammock, B. D. (2006) The role of inflammatory mediators in the synergistic toxicity of ozone and 1-nitronaphthalene in rat airways. Environmental Health Perspectives 114 (9), pp. 1354-1360.

Schmelzer, K. R., Wheelock, A. M., Dettmer, Katja, Morin, D. and Hammock, B. D. (2006) The role of inflammatory mediators in the synergistic toxicity of ozone and 1-nitronaphthalene in rat airways. Environmental Health Perspectives (EHP) 114 (9), pp. 1354-1360.

Koivunen, M. E., Dettmer, Katja, Vermeulen, R., Bakke, B., Gee, S. J. and Hammock, B. D. (2006) Improved methods for urinary atrazine mercapturate analysis--assessment of an enzyme-linked immunosorbent assay (ELISA) and a novel liquid chromatography-mass spectrometry (LC-MS) method utilizing online solid phase extraction (SPE). Analytica Chimica Acta 572 (2), pp. 180-189. Fulltext not available.

Yang, X., Bentink, S., Scheid, S. and Spang, Rainer (2006) Similarities of ordered gene lists. Journal of Bioinformatics and Computational BiologyJ Bioinform Comput Biol 4 (3), pp. 693-708. Fulltext not available.

Yu, B., Sawyer, N. A., Chiu, C., Oefner, Peter J. and Underhill, P. A. (2006) DNA mutation detection using denaturing high-performance liquid chromatography (DHPLC). Current Protocols in Human Genetics 48 (7), 10.1-7.10.14. Fulltext not available.

Kivisild, T., Shen, P., Wall, D. P., Do, B., Sung, R., Davis, K., Passarino, G., Underhill, P. A., Scharfe, C., Torroni, A., Scozzari, R., Modiano, D., Coppa, A., de Knijff, P., Feldman, M., Cavalli-Sforza, L. L. and Oefner, Peter J. (2006) The role of selection in the evolution of human mitochondrial genomes. Genetics 172 (1), pp. 373-387. Fulltext not available.

Schmitt, S., Prokisch, H., Schlunck, T., Camp, D. G., Ahting, U., Waizenegger, T., Scharfe, C., Meitinger, T., Imhof, A., Neupert, W., Oefner, Peter J. and Rapaport, D. (2006) Proteome analysis of mitochondrial outer membrane from Neurospora crassa. Proteomics 6 (1), pp. 72-80. Fulltext not available.

2005

Vlad, M. O., Cerofolini, G., Oefner, Peter J. and Ross, J. (2005) Random activation energy model and disordered kinetics, from static to dynamic disorder. Journal of Physical Chemistry B 109 (45), pp. 21241-21257. Fulltext not available.

Vlad, M. O., Szedlacsek, S. E., Pourmand, N., Cavalli-Sforza, L. L., Oefner, Peter J. and Ross, J. (2005) Fisher's theorems for multivariable, time- and space-dependent systems, with applications in population genetics and chemical kinetics. Proceedings of the National Academy of Sciences of the United States of America (PNAS) ISSN 1091-6490 102 (28), pp. 9848-9853. Fulltext not available.

Thompson, D., Antoniou, A. C., Jenkins, M., Marsh, A., Chen, X., Wayne, T., Tesoriero, A., Milne, R., Spurdle, A., Thorstenson, Y., Southey, M., Giles, G. G., Khanna, K. K., Sambrook, J., Oefner, Peter J., Goldgar, D., Hopper, J. L., Easton, D. and Chenevix-Trench, G. (2005) Two ATM variants and breast cancer risk. Human Mutation 25 (6), pp. 594-595. Fulltext not available.

Aronov, P. A., Dettmer, Katja, Christiansen, J. A., Cornel, A. J. and Hammock, B. D. (2005) Development of a HPLC/tandem-MS method for the analysis of the larvicides methoprene, hydroprene, and kinoprene at trace levels using Diels-Alder derivatization. Journal of Agricultural and Food Chemistry 53 (9), pp. 3306-3312. Fulltext not available.

Sivakumaran, T. A., Shen, P., Wall, D. P., Do, B. H., Kucheria, K. and Oefner, Peter J. (2005) Conservation of the RB1 gene in human and primates. Human Mutation 25 (4), pp. 396-409. Fulltext not available.

Ingram, K. K., Oefner, Peter J. and Gordon, D. M. (2005) Task-specific expression of the foraging gene in harvester ants. Molecular Ecology 14 (3), pp. 813-818. Fulltext not available.

Beyer, D., Eckerle, P., Cortes, H., Engewald, W. and Dettmer, Katja (2005) Development and applications of an automated in-column pyrolysis gas chromatography mass spectrometry system. Chromatographia 62, pp. 417-422. Fulltext not available.

2004

Dettmer, Katja and Hammock, B. D. (2004) Metabolomics--a new exciting field within the “omics” Sciences. Environmental Health Perspectives 112 (7), A396-397.

Ried, Andreas, Gronwald, Wolfram, Trenner, Jochen M., Brunner, Konrad, Neidig, Klaus-Peter and Kalbitzer, Hans Robert (2004) Improved simulation of NOESY spectra by RELAX-JT2 including effects of J-coupling, transverse relaxation and chemical shift anisotropy. Journal of Biomolecular NMR 30 (2), pp. 121-131. Fulltext not available.

2003

Dettmer, Katja and Engewald, W. (2003) Ambient air analysis of volatile organic compounds using adsorptive enrichment. Chromatographia 57 suppl.1, S339-S347. Fulltext not available.

Bothe, F., Dettmer, Katja and Engewald, W. (2003) Determination of perfume oil in household products by geadspace solid-phase microextraction and fast capillary gas chromatography. Chromatographia 57 suppl.1, S190-S206. Fulltext not available.

Drechsel, D., Dettmer, Katja and Engewald, W. (2003) Studies of thermally assisted hydrolysis and methylation-GC-MS of fatty acids and triglycerides using different reagents and injection systems. Chromatographia 57 suppl.1, S283-S289. Fulltext not available.

2002

Dettmer, Katja and Engewald, W. (2002) Adsorbent materials commonly used in air analysis for adsorptive enrichment and thermal desorption of volatile organic compounds. Analytical and Bioanalytical Chemistry 373 (6), pp. 490-500. Fulltext not available.

2001

Dettmer, Katja, Bittner, T. and Engewald, W. (2001) Adsorptive enrichment and thermal desorption of low-boiling oxygenated compounds—possibilities and limitations. Chromatographia 53 suppl.1, S322-S326. Fulltext not available.

Drechsel, D., Dettmer, Katja, Engewald, W., Bittner, T. and Efner, J. (2001) GC analysis of trichloroacetic acid in water samples by large-volume injection and thermal decarboxylation in a programmed-temperature vaporizer. Chromatographia 54, pp. 151-154. Fulltext not available.

2000

Dettmer, Katja, Felix, U., Engewald, W. and Mohnke, M. (2000) Application of a unique selective PLOT capillary column for the analysis of oxygenated compounds in ambient air. Chromatographia 51 Suppl., S221-S227. Fulltext not available.

Dettmer, Katja, Knobloch, T. and Engewald, W. (2000) Stability of reactive low boiling hydrocarbons on carbon based adsorbents typically used for adsorptive enrichment and thermal desorption. Analytical and Bioanalytical Chemistry (Formerly: Fresenius' Journal of Analytical Chemistry 366, pp. 70-78. Fulltext not available.

1998

Loewen, M. C., Gronwald, Wolfram, Sonnichsen, F. D., Sykes, B. D. and Davies, P. L. (1998) The ice-binding site of sea raven antifreeze protein is distinct from the carbohydrate-binding site of the homologous C-type lectin. Biochemistry 37 (51), pp. 17745-17753. Fulltext not available.

Gronwald, Wolfram, Willard, L., Jellard, T., Boyko, R. F., Rajarathnam, K., Wishart, D. S., Sonnichsen, F. D. and Sykes, B. D. (1998) CAMRA: chemical shift based computer aided protein NMR assignments. Journal of Biomolecular NMR 12 (3), pp. 395-405. Fulltext not available.

Gronwald, Wolfram, Loewen, M. C., Lix, B., Daugulis, A. J., Sonnichsen, F. D., Davies, P. L. and Sykes, B. D. (1998) The solution structure of type II antifreeze protein reveals a new member of the lectin family. Biochemistry 37 (14), pp. 4712-4721. Fulltext not available.

Gibbs, A. C., Kondejewski, L. H., Gronwald, Wolfram, Nip, A. M., Hodges, R. S., Sykes, B. D. and Wishart, D. S. (1998) Unusual beta-sheet periodicity in small cyclic peptides. Nature Structural & Molecular Biology (formerly: Nature Structural Biology) 5 (4), pp. 284-288. Fulltext not available.

1997

Gronwald, Wolfram, Schomburg, D., Tegge, W. and Wray, V. (1997) Assessment by 1H NMR spectroscopy of the structural behaviour of human parathyroid-hormone-related protein(1-34) and its close relationship with the N-terminal fragments of human parathyroid hormone in solution. Biological Chemistry 378 (12), pp. 1501-1508. Fulltext not available.

Gronwald, Wolfram, Boyko, R. F. and Sykes, B. D. (1997) GSC: a graphical program for NMR chemical shift comparison. Bioinformatics (formerly: Computer Applications in the Biosciences) 13 (5), pp. 557-558. Fulltext not available.

Gronwald, Wolfram, Boyko, R. F., Sönnichsen, F., Wishart, D. S. and Sykes, B. D. (1997) ORB, a Homology-Based Program for the Prediction of Protein NMR Chemical Shifts. Journal of Biomolecular NMR 10, pp. 165-179. Fulltext not available.

1996

Gronwald, Wolfram, Chao, H., Reddy, D. V., Davies, P. L., Sykes, B. D. and Sonnichsen, F. D. (1996) NMR characterization of side chain flexibility and backbone structure in the type I antifreeze protein at near freezing temperatures. Biochemistry 35 (51), pp. 16698-16704. Fulltext not available.

Gronwald, Wolfram, Schomburg, D., Harder, M. P., Mayer, H., Paulsen, J., Wingender, E. and Wray, V. (1996) Structure of recombinant human parathyroid hormone in solution using multidimensional NMR spectroscopy. Biological Chemistry (formerly: Biological chemistry Hoppe-Seyler) 377 (3), pp. 175-186. Fulltext not available.

1994

Wray, V., Federau, T., Gronwald, Wolfram, Mayer, H., Schomburg, D., Tegge, W. and Wingender, E. (1994) The structure of human parathyroid hormone from a study of fragments in solution using 1H NMR spectroscopy and its biological implications. Biochemistry 33 (7), pp. 1684-1693. Fulltext not available.

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