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Mass-spectrometry-based draft of the Arabidopsis proteome

Mergner, Julia ; Frejno, Martin ; List, Markus ; Papacek, Michael ; Chen, Xia ; Chaudhary, Ajeet ; Samaras, Patroklos ; Richter, Sandra ; Shikata, Hiromasa ; Messerer, Maxim ; Lang, Daniel ; Altmann, Stefan ; Cyprys, Philipp ; Zolg, Daniel P. ; Mathieson, Toby ; Bantscheff, Marcus ; Hazarika, Rashmi R. ; Schmidt, Tobias ; Dawid, Corinna ; Dunkel, Andreas ; Hofmann, Thomas ; Sprunck, Stefanie ; Falter-Braun, Pascal ; Johannes, Frank ; Mayer, Klaus F. X. ; Jürgens, Gerd ; Wilhelm, Mathias ; Baumbach, Jan ; Grill, Erwin ; Schneitz, Kay ; Schwechheimer, Claus ; Kuster, Bernhard



Abstract

Plants are essential for life and are extremely diverse organisms with unique molecular capabilities(1). Here we present a quantitative atlas of the transcriptomes, proteomes and phosphoproteomes of 30 tissues of the model plant Arabidopsis thaliana. Our analysis provides initial answers to how many genes exist as proteins (more than 18,000), where they are expressed, in which approximate ...

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