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Observation of conformational changes that underlie the catalytic cycle of Xrn2
Overbeck, Jan H., Stelzig, David, Fuchs, Anna-Lisa, Wurm, Jan Philip und Sprangers, Remco
(2022)
Observation of conformational changes that underlie the catalytic cycle of Xrn2.
Nature chemical biology 18, S. 1152-1160.
Veröffentlichungsdatum dieses Volltextes: 24 Okt 2022 05:33
Artikel
DOI zum Zitieren dieses Dokuments: 10.5283/epub.53037
Zusammenfassung
Nuclear magnetic resonance (NMR) methods that quantitatively probe motions on molecular and atomic levels have propelled the understanding of biomolecular processes for which static structures cannot provide a satisfactory description. In this work, we studied the structure and dynamics of the essential 100-kDa eukaryotic 5' -> 3' exoribonuclease Xrn2. A combination of complementary fluorine and ...
Nuclear magnetic resonance (NMR) methods that quantitatively probe motions on molecular and atomic levels have propelled the understanding of biomolecular processes for which static structures cannot provide a satisfactory description. In this work, we studied the structure and dynamics of the essential 100-kDa eukaryotic 5' -> 3' exoribonuclease Xrn2. A combination of complementary fluorine and methyl-TROSY NMR spectroscopy reveals that the apo enzyme is highly dynamic around the catalytic center. These observed dynamics are in agreement with a transition of the enzyme from the ground state into a catalytically competent state. We show that the conformational equilibrium in Xrn2 shifts substantially toward the active state in the presence of substrate and magnesium. Finally, our data reveal that the dynamics in Xrn2 correlate with the RNA degradation rate, as a mutation that attenuates motions also affects catalytic activity. In that light, our results stress the importance of studies that go beyond static structural information.
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| Dokumentenart | Artikel | ||||
| Titel eines Journals oder einer Zeitschrift | Nature chemical biology | ||||
| Verlag: | Nature | ||||
|---|---|---|---|---|---|
| Ort der Veröffentlichung: | BERLIN | ||||
| Band: | 18 | ||||
| Seitenbereich: | S. 1152-1160 | ||||
| Datum | 25 August 2022 | ||||
| Institutionen | Biologie und Vorklinische Medizin > Institut für Biophysik und physikalische Biochemie > Prof. Dr. Remco Sprangers | ||||
| Identifikationsnummer |
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| Stichwörter / Keywords | PROMOTES TRANSCRIPTION TERMINATION; SACCHAROMYCES-CEREVISIAE; MESSENGER-RNA; RIBOSOMAL-RNA; ESSENTIAL GENE; DHP1(+) GENE; EXORIBONUCLEASE; RAT1; YEAST; DEGRADATION | ||||
| Dewey-Dezimal-Klassifikation | 500 Naturwissenschaften und Mathematik > 540 Chemie 500 Naturwissenschaften und Mathematik > 570 Biowissenschaften, Biologie | ||||
| Status | Veröffentlicht | ||||
| Begutachtet | Ja, diese Version wurde begutachtet | ||||
| An der Universität Regensburg entstanden | Ja | ||||
| URN der UB Regensburg | urn:nbn:de:bvb:355-epub-530379 | ||||
| Dokumenten-ID | 53037 |
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