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GO4genome: A prokaryotic phylogeny based on genome organisation

Merkl, Rainer ; Wiezer, Arnim



Abstract

Determining the phylogeny of closely related prokaryotes may fail in an analysis of rRNA or a small set of sequences. Whole-genome phylogeny utilizes the maximally available sample space. For a precise determination of genome similarity, two aspects have to be considered when developing an algorithm of whole-genome phylogeny: (1) gene order conservation is a more precise signal than gene content; ...

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