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YACOP: Enhanced gene prediction obtained by a combination of existing methods

Tech, Maike and Merkl, Rainer (2003) YACOP: Enhanced gene prediction obtained by a combination of existing methods. In Silico Biology 3 (4), pp. 441-451.

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Other URL: http://www.bioinfo.de/isb/2003030037/


The performance of gene-predicting tools varies considerably if evaluated with respect to the parameters sensitivity and specificity or their capability to identify the correct start codon. We were interested to validate tools for gene prediction and to implement a metatool named YACOP, which combines existing tools and has a higher performance. YACOP parses and combines the output of the three ...


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Item type:Article
Institutions:Biology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie > Prof. Dr. Rainer Merkl
Identification Number:
14965344PubMed ID
Codon, Initiator/geneticsMESH
Databases, GeneticMESH
Escherichia coli/geneticsMESH
Genes, BacterialMESH
Genetic Techniques*MESH
Genomics/statistics & numerical dataMESH
# # Salmonella typhimurium/geneticsMESH
Keywords:Algorithms Codon, Initiator/genetics Databases, Genetic Escherichia coli/genetics Genes, Bacterial *Genetic Techniques Genomics/statistics & numerical data Research Support, Non-U.S. Gov't Salmonella typhimurium/genetics *Software
Dewey Decimal Classification:500 Science > 570 Life sciences
Refereed:Yes, this version has been refereed
Created at the University of Regensburg:No
Item ID:10935
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