Möglich, Andreas, Weinfurtner, Daniel, Maurer, Thilo, Gronwald, Werner and Kalbitzer, Hans-Robert (2005) A restrained molecular dynamics and simulated annealing approach for protein homology modeling utilizing mean angles. BMC Bioinformatics 6 (91).
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Other URL: http://www.biomedcentral.com/1471-2105/6/91/abstract
Abstract
Background We have developed the program PERMOL for semi-automated homology modeling of proteins. It is based on restrained molecular dynamics using a simulated annealing protocol in torsion angle space. As main restraints defining the optimal local geometry of the structure weighted mean dihedral angles and their standard deviations are used which are calculated with an algorithm described ...
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| Item type: | Article | ||||
|---|---|---|---|---|---|
| Date: | April 2005 | ||||
| Institutions: | Biology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie > Prof. Dr. Dr. Hans Robert Kalbitzer | ||||
| Projects: | Graduiertenkolleg Nichtlinearität und Nichtgleichgewicht | ||||
| Identification Number: |
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| Dewey Decimal Classification: | 500 Science > 530 Physics | ||||
| Status: | Published | ||||
| Refereed: | Yes, this version has been refereed | ||||
| Created at the University of Regensburg: | Yes | ||||
| Item ID: | 1669 |
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