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Siebers, Bettina ; Zaparty, Melanie ; Raddatz, Guenter ; Tjaden, Britta ; Albers, Sonja-Verena ; Bell, Steve D. ; Blombach, Fabian ; Kletzin, Arnulf ; Kyrpides, Nikos C. ; Lanz, Christa ; Plagens, André ; Rampp, Markus ; Rosinus, Andrea ; von Jan, Mathias ; Makarova, Kira S. ; Klenk, Hans-Peter ; Schuster, Stephan C. ; Hensel, Reinhard

The complete genome sequence of Thermoproteus tenax: a physiologically versatile member of the Crenarchaeota.

Siebers, Bettina, Zaparty, Melanie, Raddatz, Guenter, Tjaden, Britta, Albers, Sonja-Verena , Bell, Steve D., Blombach, Fabian , Kletzin, Arnulf , Kyrpides, Nikos C. , Lanz, Christa, Plagens, André, Rampp, Markus , Rosinus, Andrea, von Jan, Mathias, Makarova, Kira S., Klenk, Hans-Peter, Schuster, Stephan C. and Hensel, Reinhard (2011) The complete genome sequence of Thermoproteus tenax: a physiologically versatile member of the Crenarchaeota. PloS one 6 (10), e24222.

Date of publication of this fulltext: 12 Apr 2012 11:12
Article
DOI to cite this document: 10.5283/epub.23767


Abstract

Here, we report on the complete genome sequence of the hyperthermophilic Crenarchaeum Thermoproteus tenax (strain Kra 1, DSM 2078(T)) a type strain of the crenarchaeotal order Thermoproteales. Its circular 1.84-megabase genome harbors no extrachromosomal elements and 2,051 open reading frames are identified, covering 90.6% of the complete sequence, which represents a high coding density. Derived ...

Here, we report on the complete genome sequence of the hyperthermophilic Crenarchaeum Thermoproteus tenax (strain Kra 1, DSM 2078(T)) a type strain of the crenarchaeotal order Thermoproteales. Its circular 1.84-megabase genome harbors no extrachromosomal elements and 2,051 open reading frames are identified, covering 90.6% of the complete sequence, which represents a high coding density. Derived from the gene content, T. tenax is a representative member of the Crenarchaeota. The organism is strictly anaerobic and sulfur-dependent with optimal growth at 86 degrees C and pH 5.6. One particular feature is the great metabolic versatility, which is not accompanied by a distinct increase of genome size or information density as compared to other Crenarchaeota. T. tenax is able to grow chemolithoautotrophically (CO2/H-2) as well as chemoorganoheterotrophically in presence of various organic substrates. All pathways for synthesizing the 20 proteinogenic amino acids are present. In addition, two presumably complete gene sets for NADH:quinone oxidoreductase (complex I) were identified in the genome and there is evidence that either NADH or reduced ferredoxin might serve as electron donor. Beside the typical archaeal A(0)A(1)-ATP synthase, a membrane-bound pyrophosphatase is found, which might contribute to energy conservation. Surprisingly, all genes required for dissimilatory sulfate reduction are present, which is confirmed by growth experiments. Mentionable is furthermore, the presence of two proteins (ParA family ATPase, actin-like protein) that might be involved in cell division in Thermoproteales, where the ESCRT system is absent, and of genes involved in genetic competence (DprA, ComF) that is so far unique within Archaea.



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Details

Item typeArticle
Journal or Publication TitlePloS one
Publisher:PUBLIC LIBRARY SCIENCE
Place of Publication:SAN FRANCISCO
Volume:6
Number of Issue or Book Chapter:10
Page Range:e24222
Date7 October 2011
InstitutionsBiology, Preclinical Medicine > Institut für Anatomie > Lehrstuhl für Molekulare und zelluläre Anatomie
Identification Number
ValueType
22003381PubMed ID
10.1371/journal.pone.0024222DOI
Classification
NotationType
Amino Acids/biosynthesisMESH
Chemoautotrophic Growth/geneticsMESH
DNA Replication/geneticsMESH
Energy Metabolism/geneticsMESH
Evolution, MolecularMESH
Genome, Archaeal/geneticsMESH
GenomicsMESH
PhylogenyMESH
Protein Biosynthesis/geneticsMESH
Protein Transport/geneticsMESH
Proton-Motive Force/geneticsMESH
Thermoproteus/physiologyMESH
Transcription, Genetic/geneticsMESH
KeywordsCENTRAL CARBOHYDRATE-METABOLISM; RIBULOSE MONOPHOSPHATE PATHWAY; TRANSFER-RNA GENES; METHANOBACTERIUM-THERMOAUTOTROPHICUM; SULFOLOBUS-SOLFATARICUS; BINDING-PROTEIN; PYROBACULUM-AEROPHILUM; IGNICOCCUS-HOSPITALIS; ACIDIANUS-AMBIVALENS; DNA-REPLICATION;
Dewey Decimal Classification500 Science > 570 Life sciences
StatusPublished
RefereedYes, this version has been refereed
Created at the University of RegensburgYes
URN of the UB Regensburgurn:nbn:de:bvb:355-epub-237672
Item ID23767

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