| Published Version Download ( PDF | 2MB) | License: Creative Commons Attribution 4.0 |
Complete sequential assignment and secondary structure prediction of the cannulae forming protein CanA from the hyperthermophilic archaeon Pyrodictium abyssi
Kalbitzer, Hans Robert, Kreitner, Raphael, Munte, Claudia E., Singer, Katrin, Stetter, Karl Otto, Horn, Gudrun and Kremer, Werner
(2020)
Complete sequential assignment and secondary structure prediction of the cannulae forming protein CanA from the hyperthermophilic archaeon Pyrodictium abyssi.
Biomolecular NMR Assignments 14, pp. 141-146.
Date of publication of this fulltext: 05 Feb 2021 08:53
Article
DOI to cite this document: 10.5283/epub.44721
Abstract
CanA from Pyrodictium abyssi forms a heat-resistant organic hollow-fiber network together with CanB and CanC. An N-terminally truncated construct of CanA (K-1-CanA) gave NMR spectra of good quality that could be assigned by three-dimensional NMR methods on N-15 and C-13-N-15 enriched protein. We assigned the chemical shifts of 96% of all backbone H-1(N) atoms, 98% of all backbone N-15 atoms, 100% ...
CanA from Pyrodictium abyssi forms a heat-resistant organic hollow-fiber network together with CanB and CanC. An N-terminally truncated construct of CanA (K-1-CanA) gave NMR spectra of good quality that could be assigned by three-dimensional NMR methods on N-15 and C-13-N-15 enriched protein. We assigned the chemical shifts of 96% of all backbone H-1(N) atoms, 98% of all backbone N-15 atoms, 100% of all C-13(alpha) atoms, 100% of all H-1(alpha) atoms, 90% of all C-13 ' atoms, and 100% of the C-13(beta) atoms. Two short helices and 10 beta-strands are estimated from an analysis of the chemical shifts leading to a secondary structure content of K-1-CanA of 6% helices, 44% beta-pleated sheets, and 50% coils.
Alternative links to fulltext
Involved Institutions
Details
| Item type | Article | ||||
| Journal or Publication Title | Biomolecular NMR Assignments | ||||
| Publisher: | Springer | ||||
|---|---|---|---|---|---|
| Open Access Type: | DEAL (Springer) | ||||
| Place of Publication: | DORDRECHT | ||||
| Volume: | 14 | ||||
| Page Range: | pp. 141-146 | ||||
| Date | 12 February 2020 | ||||
| Institutions | Biology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie > Prof. Dr. Dr. Hans Robert Kalbitzer Biology, Preclinical Medicine > Institut für Biochemie, Genetik und Mikrobiologie > Lehrstuhl für Mikrobiologie (Archaeenzentrum) | ||||
| Identification Number |
| ||||
| Keywords | NOV; Pyrodictium abyssi; CanA; Cannulae; Extremophile; Solution NMR; Assignments | ||||
| Dewey Decimal Classification | 500 Science > 570 Life sciences 500 Science > 540 Chemistry & allied sciences 500 Science > 570 Life sciences | ||||
| Status | Published | ||||
| Refereed | Unknown | ||||
| Created at the University of Regensburg | Yes | ||||
| URN of the UB Regensburg | urn:nbn:de:bvb:355-epub-447210 | ||||
| Item ID | 44721 |
Download Statistics
Download Statistics