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Kalbitzer, Hans Robert ; Kreitner, Raphael ; Munte, Claudia E. ; Singer, Katrin ; Stetter, Karl Otto ; Horn, Gudrun ; Kremer, Werner

Complete sequential assignment and secondary structure prediction of the cannulae forming protein CanA from the hyperthermophilic archaeon Pyrodictium abyssi

Kalbitzer, Hans Robert, Kreitner, Raphael, Munte, Claudia E., Singer, Katrin, Stetter, Karl Otto, Horn, Gudrun and Kremer, Werner (2020) Complete sequential assignment and secondary structure prediction of the cannulae forming protein CanA from the hyperthermophilic archaeon Pyrodictium abyssi. Biomolecular NMR Assignments 14, pp. 141-146.

Date of publication of this fulltext: 05 Feb 2021 08:53
Article
DOI to cite this document: 10.5283/epub.44721


Abstract

CanA from Pyrodictium abyssi forms a heat-resistant organic hollow-fiber network together with CanB and CanC. An N-terminally truncated construct of CanA (K-1-CanA) gave NMR spectra of good quality that could be assigned by three-dimensional NMR methods on N-15 and C-13-N-15 enriched protein. We assigned the chemical shifts of 96% of all backbone H-1(N) atoms, 98% of all backbone N-15 atoms, 100% ...

CanA from Pyrodictium abyssi forms a heat-resistant organic hollow-fiber network together with CanB and CanC. An N-terminally truncated construct of CanA (K-1-CanA) gave NMR spectra of good quality that could be assigned by three-dimensional NMR methods on N-15 and C-13-N-15 enriched protein. We assigned the chemical shifts of 96% of all backbone H-1(N) atoms, 98% of all backbone N-15 atoms, 100% of all C-13(alpha) atoms, 100% of all H-1(alpha) atoms, 90% of all C-13 ' atoms, and 100% of the C-13(beta) atoms. Two short helices and 10 beta-strands are estimated from an analysis of the chemical shifts leading to a secondary structure content of K-1-CanA of 6% helices, 44% beta-pleated sheets, and 50% coils.



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Details

Item typeArticle
Journal or Publication TitleBiomolecular NMR Assignments
Publisher:Springer
Open Access Type:DEAL (Springer)
Place of Publication:DORDRECHT
Volume:14
Page Range:pp. 141-146
Date12 February 2020
InstitutionsBiology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie > Prof. Dr. Dr. Hans Robert Kalbitzer
Biology, Preclinical Medicine > Institut für Biochemie, Genetik und Mikrobiologie > Lehrstuhl für Mikrobiologie (Archaeenzentrum)
Identification Number
ValueType
10.1007/s12104-020-09934-xDOI
KeywordsNOV; Pyrodictium abyssi; CanA; Cannulae; Extremophile; Solution NMR; Assignments
Dewey Decimal Classification500 Science > 570 Life sciences
500 Science > 540 Chemistry & allied sciences
500 Science > 570 Life sciences
StatusPublished
RefereedUnknown
Created at the University of RegensburgYes
URN of the UB Regensburgurn:nbn:de:bvb:355-epub-447210
Item ID44721

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