Intrusion Detection Systems (IDS) allow for detecting malicious activities in organizational networks and hosts. As the Industrial Internet of Things (Industrial IoT) has gained momentum and attackers become process-aware, it elevates the focus on anomaly-based Network Intrusion Detection Systems (NIDS) in IoT. While previous research has primarily concentrated on fortifying SCADA systems with NIDS, keeping track of the latest advancements in resource-efficient messaging (e.g., MQTT, CoAP, and OPC-UA) is paramount. In our work, we straightforwardly derive IoT processes for NIDS using distributed tracing and process mining. We introduce a pioneering framework called MISSION which effectively captures, consolidates, and models MQTT flows, leading to a heightened process awareness in NIDS. Through our prototypical implementation, we demonstrate exceptional performance and high-quality models. Moreover, our experiments provide empirical evidence for rediscovering pre-defined processes and successfully detecting two distinct MQTT attacks in a simulated IoT network.