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YACOP: Enhanced gene prediction obtained by a combination of existing methods

Tech, Maike and Merkl, Rainer (2003) YACOP: Enhanced gene prediction obtained by a combination of existing methods. In Silico Biology 3 (4), pp. 441-451.

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Other URL: http://www.bioinfo.de/isb/2003030037/


Abstract

The performance of gene-predicting tools varies considerably if evaluated with respect to the parameters sensitivity and specificity or their capability to identify the correct start codon. We were interested to validate tools for gene prediction and to implement a metatool named YACOP, which combines existing tools and has a higher performance. YACOP parses and combines the output of the three ...

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Item Type:Article
Date:2003
Institutions:Biology, Preclinical Medicine > Institut für Biophysik und physikalische Biochemie > Prof. Dr. Reinhard Sterner > Arbeitsgruppe PD Dr. Rainer Merkl
Identification Number:
ValueType
14965344 PubMed ID
Classification:
NotationType
AlgorithmsMESH
Codon, Initiator/geneticsMESH
Databases, GeneticMESH
Escherichia coli/geneticsMESH
Genes, BacterialMESH
Genetic Techniques*MESH
Genomics/statistics & numerical dataMESH
# # Salmonella typhimurium/geneticsMESH
Software*MESH
Keywords:Algorithms Codon, Initiator/genetics Databases, Genetic Escherichia coli/genetics Genes, Bacterial *Genetic Techniques Genomics/statistics & numerical data Research Support, Non-U.S. Gov't Salmonella typhimurium/genetics *Software
Subjects:500 Science > 570 Life sciences
Status:Published
Refereed:Yes, this version has been refereed
Created at the University of Regensburg:No
Owner: Rainer Merkl
Deposited On:13 Nov 2009 12:15
Last Modified:21 Dec 2009 07:46
Item ID:10935
Owner Only: item control page
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