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Meurer, Florian ; Dolomanov, Oleg V. ; Hennig, Christoph ; Peyerimhoff, Norbert ; Kleemiss, Florian ; Puschmann, Horst ; Bodensteiner, Michael

Refinement of anomalous dispersion correction parameters in single-crystal structure determinations

Meurer, Florian , Dolomanov, Oleg V., Hennig, Christoph , Peyerimhoff, Norbert , Kleemiss, Florian , Puschmann, Horst und Bodensteiner, Michael (2022) Refinement of anomalous dispersion correction parameters in single-crystal structure determinations. IUCrJ / International Union of Crystallography 9 (5), S. 604-609.

Veröffentlichungsdatum dieses Volltextes: 29 Sep 2022 07:51
Artikel
DOI zum Zitieren dieses Dokuments: 10.5283/epub.52938


Zusammenfassung

Correcting for anomalous dispersion is part of any refinement of an X-ray diffraction crystal structure determination. The procedure takes the inelastic scattering in the diffraction experiment into account. This X-ray absorption effect is specific to each chemical compound and is particularly sensitive to radiation energies in the region of the absorption edges of the elements in the compound. ...

Correcting for anomalous dispersion is part of any refinement of an X-ray diffraction crystal structure determination. The procedure takes the inelastic scattering in the diffraction experiment into account. This X-ray absorption effect is specific to each chemical compound and is particularly sensitive to radiation energies in the region of the absorption edges of the elements in the compound. Therefore, the widely used tabulated values for these corrections can only be approximations as they are based on calculations for isolated atoms. Features of the unique spatial and electronic environment that are directly related to the anomalous dispersion are ignored, although these can be observed spectroscopically. This significantly affects the fit between the crystallographic model and the measured intensities when the excitation wavelength in an X-ray diffraction experiment is close to an element's absorption edge. Herein, we report on synchrotron multi-wavelength single-crystal X-ray diffraction, as well as X-ray absorption spectroscopy experiments which we performed on the molecular compound Mo(CO)(6) at energies around the molybdenum K edge. The dispersive (f') and absorptive (f'') terms of the anomalous dispersion can be refined as independent parameters in the full-matrix least-squares refinement. This procedure has been implemented as a new feature in the well-established OLEX2 software suite. These refined parameters are in good agreement with the independently recorded X-ray absorption spectrum. The resulting crystallographic models show significant improvement compared to those employing tabulated values.



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Details

DokumentenartArtikel
Titel eines Journals oder einer ZeitschriftIUCrJ / International Union of Crystallography
Verlag:INT UNION CRYSTALLOGRAPHY
Ort der Veröffentlichung:CHESTER
Band:9
Nummer des Zeitschriftenheftes oder des Kapitels:5
Seitenbereich:S. 604-609
Datum20 Juli 2022
InstitutionenChemie und Pharmazie > Zentrale Analytik
Projekte
Gefördert von: Deutsche Forschungsgemeinschaft (DFG) (470146201)
Identifikationsnummer
WertTyp
10.1107/S2052252522006844DOI
Stichwörter / KeywordsX-RAY-DIFFRACTION; SCATTERING FACTORS; ABSORPTION; ATOM; REFLECTION; anomalous dispersion; resonant scattering; diffraction spectroscopy; correction of the crystallographic model; synchrotron
Dewey-Dezimal-Klassifikation500 Naturwissenschaften und Mathematik > 540 Chemie
600 Technik, Medizin, angewandte Wissenschaften > 615 Pharmazie
StatusVeröffentlicht
BegutachtetJa, diese Version wurde begutachtet
An der Universität Regensburg entstandenZum Teil
URN der UB Regensburgurn:nbn:de:bvb:355-epub-529382
Dokumenten-ID52938

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