Bibliographie der Universität Regensburg

Mohammed, Azeem, Wiesner, David, Dachs, Anna, Wippermann, Elias, Göllner, Simon, Willeit, Stephanie, Klemm, Uwe, Schulz, Selina, Perleberg, Bjarne, Galligan, John J., Rodrigues, Elsa, Rembeck, Isabella, Duerkop, Axel , Ntziachristos, Vasilis, Rudack, Till und Stiel, Andre C. (2026) Mutagenesis study of a Bacteriophytochrome – insights for the development of labels for optical imaging. bioRxiv. Volltext nicht vorhanden.

Althoff, Philipp, Labudda, Kristin, Höweler, Udo, Lübben, Mathias , Gerwert, Klaus, Kötting, Carsten und Rudack, Till (2026) A fast and accurate method for light induced isomerization of retinal proteins in real time. bioRxiv. Volltext nicht vorhanden.

Ehses, Kenneth, López-Alonso, Jorge P., Antico, Odetta, Lang, Yannik, Rudack, Till , Azem, Abdussalam, Muqit, Miratul M. K., Ubarretxena-Belandia, Iban und Fernández-Busnadiego, Rubén (2026) Structural remodeling of the mitochondrial protein biogenesis machinery under proteostatic stress. Science Advances 12 (10), eaed3579.

Kötting, Carsten, Rudack, Till und Gerwert, Klaus (2025) Mechanistic insights into Ras-catalyzed GTP hydrolysis: conformational dynamics, catalytic mechanisms, and emerging therapeutic strategies. Biological Chemistry.

Rudack, Till und Lang, Yannik (2025) Data set of publication "Structural remodeling of the mitochondrial protein 1 biogenesis machinery under proteostatic stress". [Datensatz]

Drexler, Lukas, Fürtges, Torben F., Rudack, Till und Sterner, Reinhard (2025) On the Origin of Substrate Specificity of Enzymes from the Amidohydrolase Superfamily. Angewandte Chemie International Edition.

Scherlo, Marvin, Phillips, Dominic, Künne, Ricarda, Ippoliti, Emiliano, Gerwert, Klaus, Kötting, Carsten, Carloni, Paolo, Mey, Antonia S. J. S. und Rudack, Till (2025) IR spectroscopy: from experimental spectra to high-resolution structural analysis by integrating simulations and machine learning. The Journal of Physical Chemistry B 129 (45), S. 11652-11665.

Scherlo, Marvin, Höveler, Adrian, Mann, Marvin, Gerwert, Grischa, Güldenhaupt, Jörn, Gerwert, Klaus, Rudack, Till und Kötting, Carsten (2025) Replacement of a single residue in an antibody completely abolishes cognate antigen binding, as predicted by theoretical methods. Computational and Structural Biotechnology Journal 27, S. 4363-4372.

Rudack, Till und Scherlo, Marvin (2025) Data Set of Publication "IR Spectroscopy: from Experimental Spectra to High-Resolution Structural Analysis by Integrating Simulations and Machine Learning". [Datensatz]

Rudack, Till und Scherlo, Marvin (2025) Data Set of Publication Replacement of a single residue in an antibody abolishes cognate antigen binding, as predicted by theoretical methods. [Datensatz]

Liebau, Jobst, Lazzaretti, Daniela , Fürtges, Torben, Bichler, Anna, Pilsl, Michael, Rudack, Till und Sprangers, Remco (2025) 4D structural biology: quantitative dynamics in the eukaryotic RNA exosome complex. Nature Communications 16, S. 7896.

Labudda, Kristin, Norahan, Mohamad Javad, Hübner, Lisa-Marie, Althoff, Philipp, Gerwert, Klaus, Lübben, Mathias , Rudack, Till und Kötting, Carsten (2025) A second photoactivatable state of the anion-conducting channelrhodopsin GtACR1 empowers persistent activity. Communications Biology 8, S. 1183.

Rudack, Till und Fürtges, Torben (2025) Data set of publication 4D structural biology: quantitative dynamics in the eukaryotic RNA exosome 2 complex. [Datensatz]

Lang, Julia, König, Katharina, Venn, Benedikt, Zeilfelder, Saskia, Ostermeier, Matthias, Spaniol, Benjamin, Spaniol, Lara, Sommer, Frederik, Mustas, Matthieu, Geimer, Stefan, Fürtges, Torben, Brzezowski, Pawel, Zabret, Jure, Wollman, Francis-André, Nowacyzk, Marc M, Scheuring, David, Rudack, Till , Mühlhaus, Timo, Choquet, Yves und Schroda, Michael (2025) Complexome profiling of the Chlamydomonas psb28 mutant reveals TEF5 as an early PSII assembly factor. The Plant Cell 37 (6).

Bohn, Stefan, Lo, Yat Kai, Lambertz, Jan, Meier-Credo, Jakob, Fürtges, Torben, Liauw, Pasqual, Gasper-Schönenbrücher, Raphael, Wiens, Dennis, Langer, Julian D., Hochberg, Georg, Hofmann, Eckhard, Rudack, Till , Nowazcyk, Marc M. und Schuller, Jan M. (2025) Structural insights into late-stage photosystem II assembly by Psb32. bioRXiv. (Eingereicht)

Hiefinger, Caroline, Zinner, Gabriel, Fürtges, Torben F., Narindoshvili, Tamari, Schindler, Sebastian , Bruckmann, Astrid , Rudack, Till , Raushel, Frank M. und Sterner, Reinhard (2025) Photocontrolling the Enantioselectivity of a Phosphotriesterase via Incorporation of a Light-Responsive Unnatural Amino Acid. JACS Au 5 (2), S. 858-870.

Daiß, Julia L., Pilsl, Michael, Straub, Kristina , Bleckmann, Andrea , Höcherl, Mona, Heiss, Florian B. , Abascal-Palacios, Guillermo , Ramsay, Ewan Phillip, Tlučková, Katarina, Mars, Jean-Clement, Fürtges, Torben, Bruckmann, Astrid , Rudack, Till, Bernecky, Carrie, Lamour, Valérie, Panov, Konstantin , Vannini, Alessandro , Moss, Tom und Engel, Christoph (2022) The human RNA polymerase I structure reveals an HMG-like docking domain specific to metazoans. Life Science Alliance 5 (11), e202201568.

Hung, Ka Ying Sharon, Klumpe, Sven, Eisele, Markus R., Elsasser, Suzanne, Tian, Geng, Sun, Shuangwu, Moroco, Jamie A., Cheng, Tat Cheung, Joshi, Tapan, Seibel, Timo, Van Dalen, Duco, Feng, Xin-Hua, Lu, Ying, Ovaa, Huib, Engen, John R., Lee, Byung-Hoon, Rudack, Till, Sakata, Eri und Finley, Daniel (2022) Allosteric control of Ubp6 and the proteasome via a bidirectional switch. Nature Communications 13 (1), S. 1-13. Volltext nicht vorhanden.

Gupta, Tilak Kumar, Klumpe, Sven, Gries, Karin, Heinz, Steffen, Wietrzynski, Wojciech, Ohnishi, Norikazu, Niemeyer, Justus, Spaniol, Benjamin, Schaffer, Miroslava, Rast, Anna, Ostermeier, Matthias, Strauss, Mike, Plitzko, Jürgen M., Baumeister, Wolfgang, Rudack, Till, Sakamoto, Wataru, Nickelsen, Jörg, Schuller, Jan M., Schroda, Michael und Engel, Benjamin D. (2021) Structural basis for VIPP1 oligomerization and maintenance of thylakoid membrane integrity. Cell 184 (14), 3643-3659.e23. Volltext nicht vorhanden.

Acharya, Atanu, Stockmann, Julia, Beyer, Léon, Rudack, Till, Nabers, Andreas, Gumbart, James C., Gerwert, Klaus und Batista, Victor S. (2020) The Effect of (−)-Epigallocatechin-3-Gallate on the Amyloid-β Secondary Structure. Biophysical Journal 119 (2), S. 349-359. Volltext nicht vorhanden.

Liu, Peng, Zupa, Erik, Neuner, Annett, Böhler, Anna, Loerke, Justus, Flemming, Dirk, Ruppert, Thomas, Rudack, Till, Peter, Christoph, Spahn, Christian, Gruss, Oliver J., Pfeffer, Stefan und Schiebel, Elmar (2019) Insights into the assembly and activation of the microtubule nucleator γ-TuRC. Nature 578 (7795), S. 467-471. Volltext nicht vorhanden.

Majumder, Parijat, Rudack, Till, Beck, Florian, Danev, Radostin, Pfeifer, Günter, Nagy, István und Baumeister, Wolfgang (2018) Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proceedings of the National Academy of Sciences of the USA (PNAS) 116 (2), S. 534-539. Volltext nicht vorhanden.

Eisele, Markus R., Reed, Randi G., Rudack, Till, Schweitzer, Andreas, Beck, Florian, Nagy, Istvan, Pfeifer, Günter, Plitzko, Jürgen M., Baumeister, Wolfgang, Tomko, Robert J. und Sakata, Eri (2018) Expanded Coverage of the 26S Proteasome Conformational Landscape Reveals Mechanisms of Peptidase Gating. Cell Reports 24 (5), 1301-1315.e5. Volltext nicht vorhanden.

Melo, Marcelo C. R., Bernardi, Rafael C., Rudack, Till , Scheurer, Maximilian, Riplinger, Christoph, Phillips, James C., Maia, Julio D. C., Rocha, Gerd B., Ribeiro, João V., Stone, John E., Neese, Frank, Schulten, Klaus und Luthey-Schulten, Zaida (2018) NAMD goes quantum: an integrative suite for hybrid simulations. Nature Methods 15 (5), S. 351-354. Volltext nicht vorhanden.

Guo, Qiang, Lehmer, Carina, Martínez-Sánchez, Antonio, Rudack, Till, Beck, Florian, Hartmann, Hannelore, Pérez-Berlanga, Manuela, Frottin, Frédéric, Hipp, Mark S., Hartl, F. Ulrich, Edbauer, Dieter, Baumeister, Wolfgang und Fernández-Busnadiego, Rubén (2018) In Situ Structure of Neuronal C9orf72 Poly-GA Aggregates Reveals Proteasome Recruitment. Cell 172 (4), 696-705.e12. Volltext nicht vorhanden.

Scheurer, Maximilian, Rodenkirch, Peter, Siggel, Marc, Bernardi, Rafael C., Schulten, Klaus, Tajkhorshid, Emad und Rudack, Till (2018) PyContact: Rapid, Customizable, and Visual Analysis of Noncovalent Interactions in MD Simulations. Biophysical Journal 114 (3), S. 577-583. Volltext nicht vorhanden.

Massarczyk, M., Rudack, Till, Schlitter, J., Kuhne, J., Kötting, C. und Gerwert, K. (2017) Local Mode Analysis: Decoding IR Spectra by Visualizing Molecular Details. The Journal of Physical Chemistry B 121 (15), S. 3483-3492. Volltext nicht vorhanden.

Wehmer, Marc, Rudack, Till, Beck, Florian, Aufderheide, Antje, Pfeifer, Günter, Plitzko, Jürgen M., Förster, Friedrich, Schulten, Klaus, Baumeister, Wolfgang und Sakata, Eri (2017) Structural insights into the functional cycle of the ATPase module of the 26S proteasome. Proceedings of the National Academy of Sciences of the USA (PNAS) 114 (6), S. 1305-1310. Volltext nicht vorhanden.

Schweitzer, Andreas, Aufderheide, Antje, Rudack, Till, Beck, Florian, Pfeifer, Günter, Plitzko, Jürgen M., Sakata, Eri, Schulten, Klaus, Förster, Friedrich und Baumeister, Wolfgang (2016) Structure of the human 26S proteasome at a resolution of 3.9 Å. Proceedings of the National Academy of Sciences of the USA (PNAS) 113 (28), S. 7816-7821. Volltext nicht vorhanden.

Ribeiro, João V., Bernardi, Rafael C., Rudack, Till, Stone, John E., Phillips, James C., Freddolino, Peter L. und Schulten, Klaus (2016) QwikMD — Integrative Molecular Dynamics Toolkit for Novices and Experts. Scientific Reports 6 (1). Volltext nicht vorhanden.

Goh, Boon Chong, Hadden, Jodi A., Bernardi, Rafael C., Singharoy, Abhishek, McGreevy, Ryan, Rudack, Till, Cassidy, C. Keith und Schulten, Klaus (2016) Computational Methodologies for Real-Space Structural Refinement of Large Macromolecular Complexes. Annual Review of Biophysics 45 (1), S. 253-278. Volltext nicht vorhanden.

Zhang, Yi, Vuković, Lela, Rudack, Till, Han, Wei und Schulten, Klaus (2016) Recognition of Poly-Ubiquitins by the Proteasome through Protein Refolding Guided by Electrostatic and Hydrophobic Interactions. The Journal of Physical Chemistry B 120 (33), S. 8137-8146. Volltext nicht vorhanden.

Perilla, Juan R., Goh, Boon Chong, Cassidy, C. Keith, Liu, Bo, Bernardi, Rafael C., Rudack, Till, Yu, Hang, Wu, Zhe und Schulten, Klaus (2015) Molecular dynamics simulations of large macromolecular complexes. Current Opinion in Structural Biology 31, S. 64-74. Volltext nicht vorhanden.

Rudack, Till, Perilla, Juan und Schulten, Klaus (2014) Die Geheimnisse des Lebens berechnen. Spektrum der Wissenschaft (11), S. 86-95. Volltext nicht vorhanden.

Xia, Fei, Rudack, Till, Cui, Qiang, Kötting, Carsten und Gerwert, Klaus (2012) Detailed Structure of the H2PO4––Guanosine Diphosphate Intermediate in Ras-GAP Decoded from FTIR Experiments by Biomolecular Simulations. Journal of the American Chemical Society 134 (49), S. 20041-20044. Volltext nicht vorhanden.

Güldenhaupt, Jörn, Rudack, Till, Bachler, Peter, Mann, Daniel, Triola, Gemma, Waldmann, Herbert, Kötting, Carsten und Gerwert, Klaus (2012) N-Ras Forms Dimers at POPC Membranes. Biophysical Journal 103 (7), S. 1585-1593. Volltext nicht vorhanden.

Rudack, Till, Xia, Fei, Schlitter, Jürgen, Kötting, Carsten und Gerwert, Klaus (2012) Ras and GTPase-activating protein (GAP) drive GTP into a precatalytic state as revealed by combining FTIR and biomolecular simulations. Proceedings of the National Academy of Sciences of the USA (PNAS) 109 (38), S. 15295-15300. Volltext nicht vorhanden.

Rudack, Till, Xia, Fei, Schlitter, Jürgen, Kötting, Carsten und Gerwert, Klaus (2012) The Role of Magnesium for Geometry and Charge in GTP Hydrolysis, Revealed by Quantum Mechanics/Molecular Mechanics Simulations. Biophysical Journal 103 (2), S. 293-302. Volltext nicht vorhanden.

Li, Wenjin, Rudack, Till, Gerwert, Klaus, Gräter, Frauke und Schlitter, Jürgen (2012) Exploring the Multidimensional Free Energy Surface of Phosphoester Hydrolysis with Constrained QM/MM Dynamics. Journal of Chemical Theory and Computation 8 (10), S. 3596-3604. Volltext nicht vorhanden.

Xia, Fei, Rudack, Till, Kötting, Carsten, Schlitter, Jürgen und Gerwert, Klaus (2011) The specific vibrational modes of GTP in solution and bound to Ras: a detailed theoretical analysis by QM/MM simulations. Physical Chemistry Chemical Physics 13 (48), S. 21451-21460. Volltext nicht vorhanden.