Veröffentlichungswege

Kneuttinger, Andrea C. , Zwisele, Stefanie, Straub, Kristina , Bruckmann, Astrid, Busch, Florian, Kinateder, Thomas, Gaim, Barbara, Wysocki, Vicki H. , Merkl, Rainer und Sterner, Reinhard (2019) Light-Regulation of Tryptophan Synthase by Combining Protein Design and Enzymology. International Journal of Molecular Sciences 20 (20), S. 5106.

Ramchandran, Ramani, Plössl, Karolina , Straub, Kristina, Schmid, Verena, Strunz, Franziska, Wild, Jens , Merkl, Rainer, Weber, Bernhard H. F. und Friedrich, Ulrike (2019) Identification of the retinoschisin-binding site on the retinal Na/K-ATPase. PLOS ONE 14 (5), e0216320.

Schwartz, Uwe, Németh, Attila, Diermeier, Sarah , Exler, Josef H., Hansch, Stefan, Maldonado, Rodrigo, Heizinger, Leonhard , Merkl, Rainer und Längst, Gernot (2018) Characterizing the nuclease accessibility of DNA in human cells to map higher order structures of chromatin. Nucleic Acids Research 2018 (1), S. 1-16.

Merkl, Rainer, Löffler, Patrick , Schmitz, Samuel, Hupfeld, Enrico und Sterner, Reinhard (2017) Rosetta:MSF: a modular framework for multi-state computational protein design. PLOS Computational Biology 13 (6), e1005600.

Kandlinger, Florian, Plach, Maximilian G. und Merkl, Rainer (2017) AGeNNT: annotation of enzyme families by means of refined neighborhood networks. BMC Bioinformatics 18 (1), S. 1-13.

Merkl, Rainer, Verprinsky, Valery, Plach, Maximilian G. und Heizinger, Leonhard (2017) Assessing in silico the recruitment and functional spectrum of bacterial enzymes from secondary metabolism. BMC Evolutionary Biology 17 (36), S. 1-15.

Merkl, Rainer, Plach, Maximilian G., Reisinger, Bernd und Sterner, Reinhard (2016) Long-Term Persistence of Bi-functionality Contributes to the Robustness of Microbial Life through Exaptation. PLoS Genetics 12 (1), S. 1-14.

Merkl, Rainer, Žváček, Clemens, Heizinger, Leonhard und Friedrichs, Gerald (2015) An assessment of catalytic residue 3D ensembles for the prediction of enzyme function. BMC Bioinformatics 16 (359), S. 1-8.

Diermeier, Sarah Daniela Helena , Kolovos, Petros , Heizinger, Leonhard, Schwartz, Uwe, Georgomanolis, Theodore, Zirkel, Anne, Wedemann, Gero , Grosveld, Frank, Knoch, Tobias A., Merkl, Rainer, Cook, Peter R., Längst, Gernot und Papatonis, Argyris (2014) TNFα signalling primes chromatin for NF-κB binding and induces rapid and widespread nucleosome repositioning. Genome Biology 15 (12).

Janda, Jan-Oliver, Popal, Ajmal, Bauer, Jochen, Busch, Markus, Klocke, Michael, Spitzer, Wolfgang, Keller, Jörg und Merkl, Rainer (2014) H2rs: Deducing evolutionary and functionally important residue positions by means of an entropy and similarity based analysis of multiple sequence alignments. BMC Bioinformatics 15 (118).

Janda, Jan-Oliver, Busch, Markus, Kück, Fabian, Porfenenko, Mikhail und Merkl, Rainer (2012) CLIPS-1D: Analysis of multiple sequence alignments to deduce for residue-positions a role in catalysis, ligand-binding, or protein structure. BMC Bioinformatics 13, S. 55.

von Mandach, Conrad und Merkl, Rainer (2010) Genes optimized by evolution for accurate and fast translation encode in Archaea and Bacteria a broad and characteristic spectrum of protein functions. BMC genomics 11 (1), S. 617.