Startseite UR
Babl, Sabrina, Seidel, Julia M., Kugler, Fabian
, Silberhorn, Elisabeth, Ludwig, Anna, Abel, Jonas, Winklbauer, Sophia, Schaub, Niklas, Materna‐Reichelt, Silvia, Honarnejad, Kamran, Stojanović Gužvić, Nataša und Längst, Gernot
(2025)
SARS‐CoV‐2 nucleocapsid protein variants have differential RNA chaperone activity.
The FEBS Journal.
Schlegel, René
(2025)
Investigation of the effects of putative RNA Polymerase I-specific Inhibitors in the eukaryotic model organism Saccharomyces cerevisiae.
Dissertation, Universität Regensburg.
Vayssières, Marlène, Jüttner, Michael, Haas, Karina, Ancelin, Aurélie, Marchfelder, Anita, Leulliot, Nicolas, Ferreira-Cerca, Sébastien
und Blaud, Magali
(2024)
RNase W, a conserved ribonuclease family with a novel active site.
Nucleic Acids Research.
Babl, Virginia-Lorena, Girke, Philipp, Kruse, Sebastian, Pinz, Sophia Charlotte
, Hannig, Katharina, Schächner, Christopher, Hergert, Kristin, Wittner, Manuel, Seufert, Wolfgang
, Milkereit, Philipp
, Tschochner, Herbert und Griesenbeck, Joachim
(2024)
Establishment of closed 35S ribosomal RNA gene chromatin in stationary Saccharomyces cerevisiae cells.
Nucleic Acids Research.
Tümen, Deniz
(2024)
Non-invasive high throughput monitoring of the exon-specific expression of p53 isoforms identifies novel p53-tailored strategies for the treatment of colorectal cancer.
Dissertation, Universität Regensburg.
Breindl, Matthias, Spitzer, Dominika, Gerasimaitė, Rūta, Kairys, Visvaldas, Schubert, Thomas, Henfling, Ramona, Schwartz, Uwe
, Lukinavičius, Gražvydas und Manelytė, Laura
(2023)
Biochemical and cellular insights into the Baz2B protein, a non-catalytic subunit of the chromatin remodeling complex.
Nucleic Acids Research 52 (1), S. 337-55165.
Grünberger, Felix
, Jüttner, Michael, Knüppel, Robert Michael, Ferreira-Cerca, Sébastien
und Grohmann, Dina
(2023)
Nanopore-based RNA sequencing deciphers the formation, processing, and modification steps of rRNA intermediates in archaea.
RNA 29 (8), S. 1255-1273.
, Llamazares Prada, Maria, Pohl, Stephanie T
, Richter, Mandy, Tamas, Raluca, Schuler, Michael, Keller, Corinna, Mijosek, Vedrana, Muley, Thomas
, Schneider, Marc A
, Quast, Karsten, Hey, Joschka
, Heußel, Claus P, Warth, Arne, Winter, Hauke, Serçin, Özdemirhan, Karmouty‐Quintana, Harry, Jyothula, Soma SK, Patel, Manish K, Herth, Felix
, Koch, Ina, Petrosino, Giuseppe, Titimeaua, Alexandru, Mardin, Balca R, Weichenhan, Dieter, Jurkowski, Tomasz P, Imbusch, Charles D, Brors, Benedikt, Benes, Vladimir, Jung, Birgit, Wyatt, David, Stahl, Heiko F, Plass, Christoph und Jurkowska, Renata Z
(2023)
High‐resolution transcriptomic and epigenetic profiling identifies novel regulators of COPD.
The EMBO Journal 42 (12).
Volltext nicht vorhanden.
, Perez-Fernandez, Jorge
und de la Cruz, Jesús
(2023)
The Role of Ribosomal Proteins eL15 and eL36 in the Early Steps of Yeast 60S Ribosomal Subunit Assembly.
Journal of Molecular Biology 435 (24), S. 168321.
Volltext nicht vorhanden.
Jüttner, Michael und Ferreira-Cerca, Sébastien
(2022)
Ribosomenbiogenese in Archaeen.
BIOspektrum 28 (5), S. 478-480.
Tomkuvienė, Miglė, Meier, Markus, Ikasalaitė, Diana, Wildenauer, Julia, Kairys, Visvaldas
, Klimašauskas, Saulius
und Manelyte, Laura
(2022)
Enhanced nucleosome assembly at CpG sites containing an extended 5-methylcytosine analogue.
Nucleic Acids Research 50 (11), S. 6549-6561.
und Battistuzzi, Fabia Ursula
(2022)
Looking through the Lens of the Ribosome Biogenesis Evolutionary History: Possible Implications for Archaeal Phylogeny and Eukaryogenesis.
Molecular Biology and Evolution 39 (4).
Volltext nicht vorhanden.
(2022)
The dark side of the ribosome life cycle.
RNA Biology 19 (1), S. 1045-1049.
Volltext nicht vorhanden.
Grünberger, Felix, Ferreira-Cerca, Sébastien
und Grohmann, Dina
(2021)
Nanopore sequencing of RNA and cDNA molecules in Escherichia coli.
RNA 28 (3), S. 400-417.
Londei, Paola und Ferreira-Cerca, Sébastien
(2021)
Ribosome Biogenesis in Archaea.
Frontiers in Microbiology 12 (686977), S. 1-13.
(2021)
Ribosome Biogenesis in Archaea.
Frontiers in Microbiology, Provisionally accepted.
(Im Druck)
Volltext nicht vorhanden.
Knüppel, Robert, Trahan, Christian, Kern, Michael, Wagner, Alexander, Grünberger, Felix, Hausner, Winfried
, Quax, Tessa E. F., Albers, Sonja-Verena
, Oeffinger, Marlene
und Ferreira-Cerca, Sébastien
(2021)
Insights into synthesis and function of KsgA/Dim1-dependent rRNA modifications in archaea.
Nucleic Acids Research 49 (3), S. 1662-1687.
, Sinton, Matthew C.
, Wernig-Zorc, Sara, Morton, Nicholas M., Holmes, Megan C., Boardman, James P.
und Drake, Amanda J.
(2021)
Altered hypothalamic DNA methylation and stress-induced hyperactivity following early life stress.
Epigenetics & Chromatin 14 (1).
Volltext nicht vorhanden.
, Quax, Tessa, Albers, Sonja-Verena, Oeffinger, Marlene und Ferreira-Cerca, Sébastien
(2020)
Insights into synthesis and function of KsgA/Dim1-dependent rRNA modifications in archaea.
Nucleic Acids Research.
(Im Druck)
Volltext nicht vorhanden.
, Stadler, Peter F. und Marchfelder, Anita
(2020)
Splicing Endonuclease Is an Important Player in rRNA and tRNA Maturation in Archaea.
Frontiers in Microbiology 11.
Volltext nicht vorhanden.
, Adams, Zachary
, Cerletti, Micaela, De Castro, Rosana, Ferreira-Cerca, Sébastien
, Fufezan, Christian, Giménez, María Inés, Hippler, Michael, Jevtic, Zivojin
, Knüppel, Robert, Legerme, Georgio, Lenz, Christof, Marchfelder, Anita, Maupin-Furlow, Julie
, Paggi, Roberto A.
, Pfeiffer, Friedhelm
, Poetsch, Ansgar
, Urlaub, Henning und Pohlschroder, Mechthild
(2020)
The Archaeal Proteome Project advances knowledge about archaeal cell biology through comprehensive proteomics.
Nature Communications 11 (1).
Volltext nicht vorhanden.
Ferreira-Cerca, Sébastien, Knüppel, Robert, Kern, Michael, Reglin, Corinna, Ostheimer, Nina, Weiß, Matthias und Jüttner, Michael
(2019)
A versatile cis-acting element reporter system to study the function, maturation and stability of ribosomal RNA mutants in archaea.
Nucleic Acids Research 48 (4), S. 2073-2090.
Braun, Christina M., Hackert, Philipp, Schmid, Catharina E., Bohnsack, Markus T.
, Bohnsack, Katherine E.
und Perez-Fernandez, Jorge
(2019)
Pol5 is required for recycling of small subunit biogenesis factors and for formation of the peptide exit tunnel of the large ribosomal subunit.
Nucleic Acids Research 48 (1), S. 405-420.
Oberprieler, Christoph
, Talianova, Martina und Griesenbeck, Joachim
(2019)
Effects of polyploidy on the coordination of gene expression between organellar and nuclear genomes in Leucanthemum Mill. (Compositae, Anthemideae).
Ecology and Evolution 9 (16), S. 9100-9110.
Maldonado, Rodrigo
(2019)
Characterization of Muscle Glycogen Synthase and its Association with RNA in Sertoli Cells.
Dissertation, Universität Regensburg.
Mitterer, Valentin
, Shayan, Ramtin, Ferreira-Cerca, Sébastien
, Murat, Guillaume, Enne, Tanja, Rinaldi, Dana, Weigl, Sarah, Omanic, Hajrija, Gleizes, Pierre-Emmanuel
, Kressler, Dieter, Plisson-Chastang, Celia
und Pertschy, Brigitte
(2019)
Conformational proofreading of distant 40S ribosomal subunit maturation events by a long-range communication mechanism.
Nature Communications 10 (1), S. 1-15.
Bartoschik, Tanja Astrid
(2019)
Development and validation of new approaches for quantitative intermolecular interaction analysis by MicroScale Thermophoresis under near-native experimental conditions.
Dissertation, Universität Regensburg.
, Darrière, Tommy, Pilsl, Michael, Sarthou, Marie-Kerguelen, Chauvier, Adrien, Genty, Titouan
, Audibert, Sylvain, Dez, Christophe, Léger-Silvestre, Isabelle
, Normand, Christophe, Henras, Anthony K., Kwapisz, Marta
, Calvo, Olga
, Fernández-Tornero, Carlos, Tschochner, Herbert und Gadal, Olivier
(2019)
Genetic analyses led to the discovery of a super-active mutant of the RNA polymerase I.
PLOS Genetics 15 (5), e1008157.
Volltext nicht vorhanden.
, Sørensen, Brian B., Längst, Gernot, Sprunck, Stefanie, Grasser, Marion und Grasser, Klaus D.
(2019)
The UAP56-Interacting Export Factors UIEF1 and UIEF2 Function in mRNA Export.
Plant Physiology 179 (4), S. 1525-1536.
Volltext nicht vorhanden.
, Ramos Perlingeiro, Rita de Cassia, Jacobs, Laura A. und Cisneros, Bulmaro
(2019)
The intracellular domain of β-dystroglycan mediates the nucleolar stress response by suppressing UBF transcriptional activity.
Cell Death & Disease 10 (3).
Volltext nicht vorhanden.
Schwartz, Uwe, Németh, Attila, Diermeier, Sarah
, Exler, Josef H., Hansch, Stefan, Maldonado, Rodrigo, Heizinger, Leonhard
, Merkl, Rainer
und Längst, Gernot
(2018)
Characterizing the nuclease accessibility of DNA in human cells to map higher order structures of chromatin.
Nucleic Acids Research 2018 (1), S. 1-16.
, Giacò, Luciano, Carotenuto, Walter, Golfieri, Cristina, Szakal, Barnabas, Dal Maschio, Marianna, Infantino, Valentina, Beznoussenko, Galina V., Joseph, Chinnu R., Visintin, Clara, Mironov, Alexander A., Visintin, Rosella, Branzei, Dana
, Ferreira-Cerca, Sébastien
, Yeger-Lotem, Esti
und De Wulf, Peter
(2018)
Integrating Rio1 activities discloses its nutrient-activated network in Saccharomyces cerevisiae.
Nucleic Acids Research 46 (15), S. 7586-7611.
Volltext nicht vorhanden.
, Fernández-Fernández, José
, Linnemann, Jan und de la Cruz, Jesús
(2018)
Ribosomal protein L14 contributes to the early assembly of 60S ribosomal subunits in Saccharomyces cerevisiae.
Nucleic Acids Research 46 (9), S. 4715-4732.
Volltext nicht vorhanden.
, van Heeringen, Simon J., Vermeulen, Michiel
, Kretz, Markus und Mulder, Klaas W.
(2018)
Splicing and Chromatin Factors Jointly Regulate Epidermal Differentiation.
Cell Reports 25 (5), 1292-1303.e5.
Volltext nicht vorhanden.
Knüppel, Robert, Christensen, Regitse H., Gray, Fiona C., Esser, Dominik, Strauß, Daniela, Medenbach, Jan
, Siebers, Bettina
, MacNeill, Stuart A.
, LaRonde, Nicole und Ferreira-Cerca, Sébastien
(2017)
Insights into the evolutionary conserved regulation of Rio ATPase activity.
Nucleic Acids Research 46 (3), S. 1441-1456.
Ferreira-Cerca, Sébastien, Knüppel, Robert und Kuttenberger, Corinna
(2017)
Toward Time-Resolved Analysis of RNA Metabolism in Archaea Using 4-Thiouracil.
Frontiers in Microbiology 8 (286), S. 1-11.
Babl, Virginia-Lorena
(2017)
Comprehensive analysis of transitions in ribosomal DNA chromatin states in S. cerevisiae during different growth phases.
Dissertation, Universität Regensburg.
(2017)
Disruption of the UBF gene induces aberrant somatic nucleolar bodies and disrupts embryo nucleolar precursor bodies.
Gene 612, S. 5-11.
Volltext nicht vorhanden.
, Bruckmann, Astrid, Schubert, Thomas
, Längst, Gernot, Griesenbeck, Joachim
, Schubert, Veit
, Grasser, Marion und Grasser, Klaus D.
(2017)
The Composition of the Arabidopsis RNA Polymerase II Transcript Elongation Complex Reveals the Interplay between Elongation and mRNA Processing Factors.
The Plant Cell 29 (4), S. 854-870.
Volltext nicht vorhanden.
, Klein, Isabella, Rechberger, Gerald N, Wolinski, Heimo, Prattes, Michael
, Pertschy, Brigitte
, Milkereit, Philipp und Bergler, Helmut
(2017)
Viewing pre-60S maturation at a minute’s timescale.
Nucleic Acids Research 46 (6), S. 3140-3151.
Volltext nicht vorhanden.
Längst, Gernot, Silberhorn, Elisabeth, Schwartz, Uwe, Löffler, Patrick
, Schmitz, Samuel, Symelka, Anne
, Koning-Ward, Tania de
und Merkl, Rainer
(2016)
Plasmodium falciparum Nucleosomes Exhibit Reduced Stability and Lost Sequence Dependent Nucleosome Positioning.
PLoS Pathogens 12 (12), e10060.
Schmidhofer, Sandra
(2016)
Active DNA demethylation in the mononuclear phagocyte system.
Dissertation, Universität Regensburg.
, Monteiro, Caroline D., Jagodnik, Kathleen M., Fernandez, Nicolas F., Gundersen, Gregory W., Rouillard, Andrew D.
, Jenkins, Sherry L., Feldmann, Axel S., Hu, Kevin S., McDermott, Michael G., Duan, Qiaonan, Clark, Neil R., Jones, Matthew R., Kou, Yan, Goff, Troy, Woodland, Holly, Amaral, Fabio M. R., Szeto, Gregory L., Fuchs, Oliver, Schüssler-Fiorenza Rose, Sophia M., Sharma, Shvetank
, Schwartz, Uwe, Bausela, Xabier Bengoetxea, Szymkiewicz, Maciej
, Maroulis, Vasileios, Salykin, Anton, Barra, Carolina M.
, Kruth, Candice D., Bongio, Nicholas J., Mathur, Vaibhav, Todoric, Radmila D., Rubin, Udi E., Malatras, Apostolos
, Fulp, Carl T., Galindo, John A., Motiejunaite, Ruta, Jüschke, Christoph, Dishuck, Philip C.
, Lahl, Katharina, Jafari, Mohieddin
, Aibar, Sara
, Zaravinos, Apostolos
, Steenhuizen, Linda H., Allison, Lindsey R., Gamallo, Pablo, de Andres Segura, Fernando, Dae Devlin, Tyler, Pérez-García, Vicente
und Ma’ayan, Avi
(2016)
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd.
Nature Communications 7 (1).
Volltext nicht vorhanden.
Längst, Gernot, Schrader, Anna, Gross, Thomas und Thalhammer, Verena
(2015)
Characterization of Dnmt1 Binding and DNA Methylation on Nucleosomes and Nucleosomal Arrays.
PLoS ONE 10 (10), e0140076.
, Golfieri, Cristina, Massari, Lucia F., Busnelli, Sara, Pagliuca, Cinzia, Dal Maschio, Marianna, Infantino, Valentina, Visintin, Rosella, Mechtler, Karl
, Ferreira-Cerca, Sébastien
und De Wulf, Peter
(2015)
Rio1 promotes rDNA stability and downregulates RNA polymerase I to ensure rDNA segregation.
Nature Communications 6 (1).
Volltext nicht vorhanden.
Perez-Fernandez, Jorge, Pöll, Gisela, Li, Shuang, Ohmayer, Uli, Hierlmeier, Thomas und Milkereit, Philipp
(2014)
In vitro reconstitution of yeast tUTP/UTP A and UTP B subcomplexes provides new insights into their modular architecture.
PLoS ONE 2014.
Diermeier, Sarah Daniela Helena
, Kolovos, Petros
, Heizinger, Leonhard, Schwartz, Uwe, Georgomanolis, Theodore, Zirkel, Anne, Wedemann, Gero
, Grosveld, Frank, Knoch, Tobias A., Merkl, Rainer, Cook, Peter R., Längst, Gernot und Papatonis, Argyris
(2014)
TNFα signalling primes chromatin for NF-κB binding and induces rapid and widespread nucleosome repositioning.
Genome Biology 15 (12).
Ferreira-Cerca, Sébastien
, Kiburu, Irene, Thomson, Emma, LaRonde, Nicole und Hurt, Ed
(2014)
Dominant Rio1 kinase/ATPase catalytic mutant induces trapping of late pre-40S biogenesis factors in 80S-like ribosomes.
Nucleic Acids Research 2014.
Schmidl, Christian
(2014)
Molecular characterization of human regulatory and conventional T cells.
Dissertation, Universität Regensburg.
, Pilsl, Michael, Reiter, Alarich, Williams, Lydia, Gerber, Jochen, Böhm, Maria, Deutzmann, Rainer, Griesenbeck, Joachim
, Milkereit, Philipp und Tschochner, Herbert
(2014)
Binding of the Termination Factor Nsi1 to Its Cognate DNA Site Is Sufficient To Terminate RNA Polymerase I Transcription In Vitro and To Induce Termination In Vivo.
Molecular and Cellular Biology 34 (20), S. 3817-3827.
Volltext nicht vorhanden.
, Hamdane, Nourdine, Stefanovsky, Victor Y., Tremblay, Michel G., Németh, Attila
, Paquet, Eric, Lessard, Frédéric, Sanij, Elaine
, Hannan, Ross
und Moss, Tom
(2014)
Conditional Inactivation of Upstream Binding Factor Reveals Its Epigenetic Functions and the Existence of a Somatic Nucleolar Precursor Body.
PLoS Genetics 10 (8), e1004505.
Volltext nicht vorhanden.
, Obermeier, Ingrid, Längst, Gernot und Wagner, Ralf
(2014)
CpG domains downstream of TSSs promote high levels of gene expression.
Nucleic Acids Research 42 (6), S. 3551-3564.
Volltext nicht vorhanden.
Zillner, Karina
(2013)
Nucleolar epigenomics by dynamic molecular combing and nucleolar matrix analysis.
Dissertation, Universität Regensburg.
und Hurt, Ed
(2013)
Eukaryotic ribosome biogenesis at a glance.
Journal of Cell Science 126 (21), S. 4815-4821.
Volltext nicht vorhanden.
Hamperl, Stephan
(2012)
Compositional and structural analysis of selected chromosomal domains from Saccharomyces cerevisiae.
Dissertation, Universität Regensburg.
Wittner, Manuel
(2012)
Establishment and maintenance of 35S rRNA gene chromatin states in Saccharomyces cerevisiae.
Dissertation, Universität Regensburg.
, Pusch, Miriam Caroline, Diermeier, Sarah
, Benes, Vladimir
, Kremmer, Elisabeth, Imhof, Axel
und Längst, Gernot
(2012)
Df31 Protein and snoRNAs Maintain Accessible Higher-Order Structures of Chromatin.
Molecular Cell 48 (3), S. 434-444.
Volltext nicht vorhanden.
(2012)
Ribosomal proteins L7 and L8 function in concert with six A3 assembly factors to propagate assembly of domains I and II of 25S rRNA in yeast 60S ribosomal subunits.
RNA 18 (10), S. 1805-1822.
Volltext nicht vorhanden.
, Neueder, Andreas, Milkereit, Philipp
und Valášek, Leoš Shivaya
(2012)
Small Ribosomal Protein RPS0 Stimulates Translation Initiation by Mediating 40S-Binding of eIF3 via Its Direct Contact with the eIF3a/TIF32 Subunit.
PLoS ONE 7 (7), e40464.
Volltext nicht vorhanden.
Exler, Josef H.
(2011)
Nuclear architecture and structural dynamics - molecular basis of chromatin remodeling induced by human ISWI machines -.
Dissertation, Universität Regensburg.
(2011)
Survival of thermophilic and hyperthermophilic microorganisms after exposure to UV-C, ionizing radiation and desiccation.
Archives of Microbiology 193 (11), S. 797-809.
Volltext nicht vorhanden.
, Neueder, Andreas, Jakob, Steffen
, Woolford, John L., Tschochner, Herbert und Milkereit, Philipp
(2009)
rRNA Maturation in Yeast Cells Depleted of Large Ribosomal Subunit Proteins.
PLoS ONE 4 (12), e8249.
Volltext nicht vorhanden.
, Schrader, Anna, Riede, Philipp, Strohner, Ralf, Lehmann, Elisabeth und Längst, Gernot
(2007)
DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes.
Proceedings of the National Academy of Sciences 104 (40), S. 15635-15640.
Volltext nicht vorhanden.
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