Number of items at this level: 75.
A
Azuara-Medina, Paulina Margarita,
Sandoval-Duarte, Ariana María,
Morales-Lázaro, Sara L.,
Modragón-González, Ricardo,
Vélez-Aguilera, Griselda,
Gómez-López, Juan de Dios,
Jiménez-Gutiérrez, Guadalupe Elizabeth,
Tiburcio-Félix, Reynaldo,
Martínez-Vieyra, Ivette,
Suárez-Sánchez, Rocío,
Längst, Gernot,
Magaña, Jonathan Javier,
Winder, Steve J.,
Ortega, Arturo 
,
Ramos Perlingeiro, Rita de Cassia,
Jacobs, Laura A. and
Cisneros, Bulmaro
(2019)
The intracellular domain of β-dystroglycan mediates the nucleolar stress response by suppressing UBF transcriptional activity.
Cell Death & Disease 10 (3).
Fulltext not available.
Antosz, Wojciech,
Pfab, Alexander,
Ehrnsberger, Hans F.,
Holzinger, Philipp,
Köllen, Karin,
Mortensen, Simon A. 
,
Bruckmann, Astrid,
Schubert, Thomas 
,
Längst, Gernot,
Griesenbeck, Joachim 
,
Schubert, Veit 
,
Grasser, Marion and
Grasser, Klaus D.
(2017)
The Composition of the Arabidopsis RNA Polymerase II Transcript Elongation Complex Reveals the Interplay between Elongation and mRNA Processing Factors.
The Plant Cell 29 (4), pp. 854-870.
Fulltext not available.
Aramayo, Rodolfo,
Pöll, Gisela,
Braun, Tobias,
Jakovljevic, Jelena 
,
Neueder, Andreas,
Jakob, Steffen 
,
Woolford, John L.,
Tschochner, Herbert and
Milkereit, Philipp
(2009)
rRNA Maturation in Yeast Cells Depleted of Large Ribosomal Subunit Proteins.
PLoS ONE 4 (12), e8249.
Fulltext not available.
B
Babl, Virginia-Lorena,
Girke, Philipp,
Kruse, Sebastian,
Pinz, Sophia Charlotte 
,
Hannig, Katharina,
Schächner, Christopher,
Hergert, Kristin,
Wittner, Manuel,
Seufert, Wolfgang 
,
Milkereit, Philipp 
,
Tschochner, Herbert and
Griesenbeck, Joachim 
(2024)
Establishment of closed 35S ribosomal RNA gene chromatin in stationary Saccharomyces cerevisiae cells.
Nucleic Acids Research.
Breindl, Matthias,
Spitzer, Dominika,
Gerasimaitė, Rūta,
Kairys, Visvaldas,
Schubert, Thomas,
Henfling, Ramona,
Schwartz, Uwe 
,
Lukinavičius, Gražvydas and
Manelytė, Laura
(2023)
Biochemical and cellular insights into the Baz2B protein, a non-catalytic subunit of the chromatin remodeling complex.
Nucleic Acids Research 52 (1), pp. 337-55165.
Braun, Christina M.,
Hackert, Philipp,
Schmid, Catharina E.,
Bohnsack, Markus T. 
,
Bohnsack, Katherine E. 
and
Perez-Fernandez, Jorge 
(2019)
Pol5 is required for recycling of small subunit biogenesis factors and for formation of the peptide exit tunnel of the large ribosomal subunit.
Nucleic Acids Research 48 (1), pp. 405-420.
Beck, Alexander,
Trippel, Franziska,
Wagner, Alexandra,
Joppien, Saskia,
Felle, Max,
Vokuhl, Christian,
Schwarzmayr, Thomas,
Strom, Tim M.,
von Schweinitz, Dietrich,
Längst, Gernot and
Kappler, Roland
(2018)
Overexpression of UHRF1 promotes silencing of tumor suppressor genes and predicts outcome in hepatoblastoma.
Clinical Epigenetics 10 (1).
Fulltext not available.
Beblo, Kristina,
Douki, Thierry,
Schmalz, Gottfried,
Rachel, Reinhard,
Wirth, Reinhard,
Huber, Harald,
Reitz, Günther and
Rettberg, Petra 
(2011)
Survival of thermophilic and hyperthermophilic microorganisms after exposure to UV-C, ionizing radiation and desiccation.
Archives of Microbiology 193 (11), pp. 797-809.
Fulltext not available.
C
Charton, Romain,
Muguet, Alexia,
Griesenbeck, Joachim,
Smerdon, Michael J. and
Conconi, Antonio
(2019)
In yeast cells arrested at the early S-phase by hydroxyurea, rRNA gene promoters and chromatin are poised for transcription while rRNA synthesis is compromised.
Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 815, pp. 20-29.
Fulltext not available.
D
Diermeier, Sarah Daniela Helena 
,
Kolovos, Petros 
,
Heizinger, Leonhard,
Schwartz, Uwe,
Georgomanolis, Theodore,
Zirkel, Anne,
Wedemann, Gero 
,
Grosveld, Frank,
Knoch, Tobias A.,
Merkl, Rainer,
Cook, Peter R.,
Längst, Gernot and
Papatonis, Argyris
(2014)
TNFα signalling primes chromatin for NF-κB binding and induces rapid and widespread nucleosome repositioning.
Genome Biology 15 (12).
E
Ehrnsberger, Hans F.,
Pfaff, Christina,
Hachani, Ines,
Flores-Tornero, María 
,
Sørensen, Brian B.,
Längst, Gernot,
Sprunck, Stefanie,
Grasser, Marion and
Grasser, Klaus D.
(2019)
The UAP56-Interacting Export Factors UIEF1 and UIEF2 Function in mRNA Export.
Plant Physiology 179 (4), pp. 1525-1536.
Fulltext not available.
F
Fitzgerald, Eamon 
,
Sinton, Matthew C. 
,
Wernig-Zorc, Sara,
Morton, Nicholas M.,
Holmes, Megan C.,
Boardman, James P. 
and
Drake, Amanda J.
(2021)
Altered hypothalamic DNA methylation and stress-induced hyperactivity following early life stress.
Epigenetics & Chromatin 14 (1).
Fulltext not available.
Ferreira-Cerca, Sébastien,
Knüppel, Robert,
Kern, Michael,
Reglin, Corinna,
Ostheimer, Nina,
Weiß, Matthias and
Jüttner, Michael 
(2019)
A versatile cis-acting element reporter system to study the function, maturation and stability of ribosomal RNA mutants in archaea.
Nucleic Acids Research 48 (4), pp. 2073-2090.
G
Grünberger, Felix 
,
Jüttner, Michael,
Knüppel, Robert Michael,
Ferreira-Cerca, Sébastien 
and
Grohmann, Dina 
(2023)
Nanopore-based RNA sequencing deciphers the formation, processing, and modification steps of rRNA intermediates in archaea.
RNA 29 (8), pp. 1255-1273.
H
Hamdane, Nourdine,
Tremblay, Michel G.,
Dillinger, Stefan,
Stefanovsky, Victor Y.,
Németh, Attila and
Moss, Tom 
(2017)
Disruption of the UBF gene induces aberrant somatic nucleolar bodies and disrupts embryo nucleolar precursor bodies.
Gene 612, pp. 5-11.
Fulltext not available.
I
Iacovella, Maria G.,
Bremang, Michael,
Basha, Omer 
,
Giacò, Luciano,
Carotenuto, Walter,
Golfieri, Cristina,
Szakal, Barnabas,
Dal Maschio, Marianna,
Infantino, Valentina,
Beznoussenko, Galina V.,
Joseph, Chinnu R.,
Visintin, Clara,
Mironov, Alexander A.,
Visintin, Rosella,
Branzei, Dana 
,
Ferreira-Cerca, Sébastien 
,
Yeger-Lotem, Esti 
and
De Wulf, Peter
(2018)
Integrating Rio1 activities discloses its nutrient-activated network in Saccharomyces cerevisiae.
Nucleic Acids Research 46 (15), pp. 7586-7611.
Fulltext not available.
Iacovella, Maria G. 
,
Golfieri, Cristina,
Massari, Lucia F.,
Busnelli, Sara,
Pagliuca, Cinzia,
Dal Maschio, Marianna,
Infantino, Valentina,
Visintin, Rosella,
Mechtler, Karl 
,
Ferreira-Cerca, Sébastien 
and
De Wulf, Peter
(2015)
Rio1 promotes rDNA stability and downregulates RNA polymerase I to ensure rDNA segregation.
Nature Communications 6 (1).
Fulltext not available.
J
Jakovljevic, Jelena,
Ohmayer, Uli,
Gamalinda, Michael,
Talkish, Jason,
Alexander, Lisa,
Linnemann, Jan,
Milkereit, Philipp and
Woolford, John L. 
(2012)
Ribosomal proteins L7 and L8 function in concert with six A3 assembly factors to propagate assembly of domains I and II of 25S rRNA in yeast 60S ribosomal subunits.
RNA 18 (10), pp. 1805-1822.
Fulltext not available.
K
Knüppel, Robert,
Trahan, Christian,
Kern, Michael,
Wagner, Alexander,
Grünberger, Felix,
Hausner, Winfried 
,
Quax, Tessa E. F.,
Albers, Sonja-Verena 
,
Oeffinger, Marlene 
and
Ferreira-Cerca, Sébastien 
(2021)
Insights into synthesis and function of KsgA/Dim1-dependent rRNA modifications in archaea.
Nucleic Acids Research 49 (3), pp. 1662-1687.
Knüppel, Robert,
Trahan, Christian,
Kern, Michael,
Wagner, Alexander,
Grünberger, Felix,
Hausner, Winfried 
,
Quax, Tessa,
Albers, Sonja-Verena,
Oeffinger, Marlene and
Ferreira-Cerca, Sébastien 
(2020)
Insights into synthesis and function of KsgA/Dim1-dependent rRNA modifications in archaea.
Nucleic Acids Research.
(In Press)
Fulltext not available.
Knüppel, Robert,
Christensen, Regitse H.,
Gray, Fiona C.,
Esser, Dominik,
Strauß, Daniela,
Medenbach, Jan 
,
Siebers, Bettina 
,
MacNeill, Stuart A. 
,
LaRonde, Nicole and
Ferreira-Cerca, Sébastien 
(2017)
Insights into the evolutionary conserved regulation of Rio ATPase activity.
Nucleic Acids Research 46 (3), pp. 1441-1456.
Krinner, Simone,
Heitzer, Asli P.,
Diermeier, Sarah D. 
,
Obermeier, Ingrid,
Längst, Gernot and
Wagner, Ralf
(2014)
CpG domains downstream of TSSs promote high levels of gene expression.
Nucleic Acids Research 42 (6), pp. 3551-3564.
Fulltext not available.
L
Londei, Paola and
Ferreira-Cerca, Sébastien 
(2021)
Ribosome Biogenesis in Archaea.
Frontiers in Microbiology, Provisionally accepted.
(In Press)
Fulltext not available.
Llamazares-Prada, Maria,
Espinet, Elisa,
Mijošek, Vedrana,
Schwartz, Uwe,
Lutsik, Pavlo,
Tamas, Raluca,
Richter, Mandy,
Behrendt, Annika,
Pohl, Stephanie T.,
Benz, Naja P.,
Muley, Thomas,
Warth, Arne,
Heußel, Claus Peter,
Winter, Hauke,
Landry, Jonathan J. M.,
Herth, Felix J.F.,
Mertens, Tinne C.J.,
Karmouty-Quintana, Harry,
Koch, Ina,
Benes, Vladimir,
Korbel, Jan O.,
Waszak, Sebastian M.,
Trumpp, Andreas,
Wyatt, David M.,
Stahl, Heiko F.,
Plass, Christoph and
Jurkowska, Renata Z.
(2021)
Versatile workflow for cell type–resolved transcriptional and epigenetic profiles from cryopreserved human lung.
JCI Insight 6 (6).
Fulltext not available.
Längst, Gernot,
Silberhorn, Elisabeth,
Schwartz, Uwe,
Löffler, Patrick 
,
Schmitz, Samuel,
Symelka, Anne 
,
Koning-Ward, Tania de 
and
Merkl, Rainer
(2016)
Plasmodium falciparum Nucleosomes Exhibit Reduced Stability and Lost Sequence Dependent Nucleosome Positioning.
PLoS Pathogens 12 (12), e10060.
M
Mitterer, Valentin 
,
Shayan, Ramtin,
Ferreira-Cerca, Sébastien 
,
Murat, Guillaume,
Enne, Tanja,
Rinaldi, Dana,
Weigl, Sarah,
Omanic, Hajrija,
Gleizes, Pierre-Emmanuel 
,
Kressler, Dieter,
Plisson-Chastang, Celia 
and
Pertschy, Brigitte 
(2019)
Conformational proofreading of distant 40S ribosomal subunit maturation events by a long-range communication mechanism.
Nature Communications 10 (1), pp. 1-15.
McStay, Brian 
,
Darrière, Tommy,
Pilsl, Michael,
Sarthou, Marie-Kerguelen,
Chauvier, Adrien,
Genty, Titouan 
,
Audibert, Sylvain,
Dez, Christophe,
Léger-Silvestre, Isabelle 
,
Normand, Christophe,
Henras, Anthony K.,
Kwapisz, Marta 
,
Calvo, Olga 
,
Fernández-Tornero, Carlos,
Tschochner, Herbert and
Gadal, Olivier
(2019)
Genetic analyses led to the discovery of a super-active mutant of the RNA polymerase I.
PLOS Genetics 15 (5), e1008157.
Fulltext not available.
Milkereit, Philipp,
Pöll, Gisela,
Müller, Christian,
Bodden, Malena,
Teubl, Fabian,
Eichner, Norbert,
Lehmann, Gerhard 
,
Griesenbeck, Joachim and
Tschochner, Herbert
(2017)
Structural transitions during large ribosomal subunit maturation analyzed by tethered nuclease structure probing in S. cerevisiae.
PLOS ONE 12 (7), e0179405.
Merkl, Philipp,
Perez-Fernandez, Jorge 
,
Pilsl, Michael,
Reiter, Alarich,
Williams, Lydia,
Gerber, Jochen,
Böhm, Maria,
Deutzmann, Rainer,
Griesenbeck, Joachim 
,
Milkereit, Philipp and
Tschochner, Herbert
(2014)
Binding of the Termination Factor Nsi1 to Its Cognate DNA Site Is Sufficient To Terminate RNA Polymerase I Transcription In Vitro and To Induce Termination In Vivo.
Molecular and Cellular Biology 34 (20), pp. 3817-3827.
Fulltext not available.
O
P
Pfaff, Christina,
Ehrnsberger, Hans F.,
Flores-Tornero, María,
Sørensen, Brian B.,
Schubert, Thomas,
Längst, Gernot,
Griesenbeck, Joachim,
Sprunck, Stefanie,
Grasser, Marion and
Grasser, Klaus D.
(2018)
ALY RNA-Binding Proteins Are Required for Nucleocytosolic mRNA Transport and Modulate Plant Growth and Development.
Plant Physiology 177 (1), pp. 226-240.
Fulltext not available.
Perez-Fernandez, Jorge,
Pöll, Gisela,
Li, Shuang,
Ohmayer, Uli,
Hierlmeier, Thomas and
Milkereit, Philipp 
(2014)
In vitro reconstitution of yeast tUTP/UTP A and UTP B subcomplexes provides new insights into their modular architecture.
PLoS ONE 2014.
Pikaard, Craig S. 
,
Hamdane, Nourdine,
Stefanovsky, Victor Y.,
Tremblay, Michel G.,
Németh, Attila 
,
Paquet, Eric,
Lessard, Frédéric,
Sanij, Elaine 
,
Hannan, Ross 
and
Moss, Tom
(2014)
Conditional Inactivation of Upstream Binding Factor Reveals Its Epigenetic Functions and the Existence of a Somatic Nucleolar Precursor Body.
PLoS Genetics 10 (8), e1004505.
Fulltext not available.
R
Rippe, Karsten 
,
Schrader, Anna,
Riede, Philipp,
Strohner, Ralf,
Lehmann, Elisabeth and
Längst, Gernot
(2007)
DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes.
Proceedings of the National Academy of Sciences 104 (40), pp. 15635-15640.
Fulltext not available.
S
Schwartz, Uwe 
,
Llamazares Prada, Maria,
Pohl, Stephanie T 
,
Richter, Mandy,
Tamas, Raluca,
Schuler, Michael,
Keller, Corinna,
Mijosek, Vedrana,
Muley, Thomas 
,
Schneider, Marc A 
,
Quast, Karsten,
Hey, Joschka 
,
Heußel, Claus P,
Warth, Arne,
Winter, Hauke,
Serçin, Özdemirhan,
Karmouty‐Quintana, Harry,
Jyothula, Soma SK,
Patel, Manish K,
Herth, Felix 
,
Koch, Ina,
Petrosino, Giuseppe,
Titimeaua, Alexandru,
Mardin, Balca R,
Weichenhan, Dieter,
Jurkowski, Tomasz P,
Imbusch, Charles D,
Brors, Benedikt,
Benes, Vladimir,
Jung, Birgit,
Wyatt, David,
Stahl, Heiko F,
Plass, Christoph and
Jurkowska, Renata Z
(2023)
High‐resolution transcriptomic and epigenetic profiling identifies novel regulators of COPD.
The EMBO Journal 42 (12).
Fulltext not available.
Schwarz, Thandi S.,
Berkemer, Sarah J.,
Bernhart, Stephan H.,
Weiß, Matthias,
Ferreira-Cerca, Sébastien 
,
Stadler, Peter F. and
Marchfelder, Anita
(2020)
Splicing Endonuclease Is an Important Player in rRNA and tRNA Maturation in Archaea.
Frontiers in Microbiology 11.
Fulltext not available.
Schulze, Stefan 
,
Adams, Zachary 
,
Cerletti, Micaela,
De Castro, Rosana,
Ferreira-Cerca, Sébastien 
,
Fufezan, Christian,
Giménez, María Inés,
Hippler, Michael,
Jevtic, Zivojin 
,
Knüppel, Robert,
Legerme, Georgio,
Lenz, Christof,
Marchfelder, Anita,
Maupin-Furlow, Julie 
,
Paggi, Roberto A. 
,
Pfeiffer, Friedhelm 
,
Poetsch, Ansgar 
,
Urlaub, Henning and
Pohlschroder, Mechthild
(2020)
The Archaeal Proteome Project advances knowledge about archaeal cell biology through comprehensive proteomics.
Nature Communications 11 (1).
Fulltext not available.
Schwartz, Uwe,
Németh, Attila,
Diermeier, Sarah 
,
Exler, Josef H.,
Hansch, Stefan,
Maldonado, Rodrigo,
Heizinger, Leonhard 
,
Merkl, Rainer 
and
Längst, Gernot
(2018)
Characterizing the nuclease accessibility of DNA in human cells to map higher order structures of chromatin.
Nucleic Acids Research 2018 (1), pp. 1-16.
Schubert, Thomas 
,
Pusch, Miriam Caroline,
Diermeier, Sarah 
,
Benes, Vladimir 
,
Kremmer, Elisabeth,
Imhof, Axel 
and
Längst, Gernot
(2012)
Df31 Protein and snoRNAs Maintain Accessible Higher-Order Structures of Chromatin.
Molecular Cell 48 (3), pp. 434-444.
Fulltext not available.
Stoehr, Robert,
Knuechel, Ruth,
Boecker, Joerg,
Blaszyk, Hagen,
Schmitt, Ruediger,
Filbeck, Thomas,
Hofstaedter, Ferdinand and
Hartmann, Arndt
(2002)
Histologic-Genetic Mapping by Allele-Specific PCR Reveals Intraurothelial Spread of p53 Mutant Tumor Clones.
Laboratory Investigation 82 (11), pp. 1553-1561.
Fulltext not available.
T
Tomkuvienė, Miglė,
Meier, Markus,
Ikasalaitė, Diana,
Wildenauer, Julia,
Kairys, Visvaldas 
,
Klimašauskas, Saulius 
and
Manelyte, Laura
(2022)
Enhanced nucleosome assembly at CpG sites containing an extended 5-methylcytosine analogue.
Nucleic Acids Research 50 (11), pp. 6549-6561.
Tanis, Sabine E.J.,
Jansen, Pascal W.T.C.,
Zhou, Huiqing 
,
van Heeringen, Simon J.,
Vermeulen, Michiel 
,
Kretz, Markus and
Mulder, Klaas W.
(2018)
Splicing and Chromatin Factors Jointly Regulate Epidermal Differentiation.
Cell Reports 25 (5), 1292-1303.e5.
Fulltext not available.
Tuite, Mick F.,
Kouba, Tomáš,
Dányi, István,
Gunišová, Stanislava,
Munzarová, Vanda,
Vlčková, Vladislava,
Cuchalová, Lucie 
,
Neueder, Andreas,
Milkereit, Philipp 
and
Valášek, Leoš Shivaya
(2012)
Small Ribosomal Protein RPS0 Stimulates Translation Initiation by Mediating 40S-Binding of eIF3 via Its Direct Contact with the eIF3a/TIF32 Subunit.
PLoS ONE 7 (7), e40464.
Fulltext not available.
V
Vayssières, Marlène,
Jüttner, Michael,
Haas, Karina,
Ancelin, Aurélie,
Marchfelder, Anita,
Leulliot, Nicolas,
Ferreira-Cerca, Sébastien 
and
Blaud, Magali
(2024)
RNase W, a conserved ribonuclease family with a novel active site.
Nucleic Acids Research.
W
Wang, Zichen 
,
Monteiro, Caroline D.,
Jagodnik, Kathleen M.,
Fernandez, Nicolas F.,
Gundersen, Gregory W.,
Rouillard, Andrew D. 
,
Jenkins, Sherry L.,
Feldmann, Axel S.,
Hu, Kevin S.,
McDermott, Michael G.,
Duan, Qiaonan,
Clark, Neil R.,
Jones, Matthew R.,
Kou, Yan,
Goff, Troy,
Woodland, Holly,
Amaral, Fabio M. R.,
Szeto, Gregory L.,
Fuchs, Oliver,
Schüssler-Fiorenza Rose, Sophia M.,
Sharma, Shvetank 
,
Schwartz, Uwe,
Bausela, Xabier Bengoetxea,
Szymkiewicz, Maciej 
,
Maroulis, Vasileios,
Salykin, Anton,
Barra, Carolina M. 
,
Kruth, Candice D.,
Bongio, Nicholas J.,
Mathur, Vaibhav,
Todoric, Radmila D.,
Rubin, Udi E.,
Malatras, Apostolos 
,
Fulp, Carl T.,
Galindo, John A.,
Motiejunaite, Ruta,
Jüschke, Christoph,
Dishuck, Philip C. 
,
Lahl, Katharina,
Jafari, Mohieddin 
,
Aibar, Sara 
,
Zaravinos, Apostolos 
,
Steenhuizen, Linda H.,
Allison, Lindsey R.,
Gamallo, Pablo,
de Andres Segura, Fernando,
Dae Devlin, Tyler,
Pérez-García, Vicente 
and
Ma’ayan, Avi 
(2016)
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd.
Nature Communications 7 (1).
Fulltext not available.
Z
Zisser, Gertrude,
Ohmayer, Uli,
Mauerhofer, Christina,
Mitterer, Valentin 
,
Klein, Isabella,
Rechberger, Gerald N,
Wolinski, Heimo,
Prattes, Michael 
,
Pertschy, Brigitte 
,
Milkereit, Philipp and
Bergler, Helmut 
(2017)
Viewing pre-60S maturation at a minute’s timescale.
Nucleic Acids Research 46 (6), pp. 3140-3151.
Fulltext not available.
Zillner, Karina,
Komatsu, Jun,
Filarsky, Katharina,
Kalepu, Rajakiran,
Bensimon, Aaron and
Németh, Attila
(2015)
Active Human Nucleolar Organizer Regions are Interspersed with Inactive rDNA Repeats in Normal and Tumor Cells.
Epigenomics 7 (3), pp. 363-378.
Fulltext not available.
This list was generated on Sun Mar 23 12:42:41 2025 CET.